RNA–Protein interactions for RNA: YPR158C-D

YPR158C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YPR158C-D, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR158C-D	YPR158C-D	RPN11	P43588	306 aa	Known RBP	4.64	□□□□□ -1.67
YPR158C-D	YPR158C-D	HUL5	P53119	910 aa		4.64	□□□□□ -1.67
YPR158C-D	YPR158C-D	CWC15	Q03772	175 aa	Known RBP	4.64	□□□□□ -1.67
YPR158C-D	YPR158C-D	MSB4	Q12317	492 aa		4.64	□□□□□ -1.67
YPR158C-D	YPR158C-D	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
YPR158C-D	YPR158C-D	ROM2	P51862	1356 aa	Known RBP	4.63	□□□□□ -1.67
YPR158C-D	YPR158C-D	ATG1	P53104	897 aa		4.62	□□□□□ -1.67
YPR158C-D	YPR158C-D	SNT2	P53127	1403 aa		4.62	□□□□□ -1.67
YPR158C-D	YPR158C-D	RRT6	P53117	311 aa	Predicted RBP	4.62	□□□□□ -1.67
YPR158C-D	YPR158C-D	LDH1	P38139	375 aa		4.61	□□□□□ -1.67
YPR158C-D	YPR158C-D	ESP1	Q03018	1630 aa		4.61	□□□□□ -1.67
YPR158C-D	YPR158C-D	IRC20	Q06554	1556 aa		4.61	□□□□□ -1.67
YPR158C-D	YPR158C-D	TIM50	Q02776	476 aa		4.61	□□□□□ -1.67
YPR158C-D	YPR158C-D	AFG2	P32794	780 aa		4.6	□□□□□ -1.67
YPR158C-D	YPR158C-D	NCS6	P53088	359 aa		4.6	□□□□□ -1.67
YPR158C-D	YPR158C-D	RPS9A	O13516	197 aa	Known RBP	4.6	□□□□□ -1.67
YPR158C-D	YPR158C-D	HXT5	P38695	592 aa		4.6	□□□□□ -1.67
YPR158C-D	YPR158C-D	TY3B-G	Q99315	1547 aa		4.6	□□□□□ -1.67
YPR158C-D	YPR158C-D	SRB8	P25648	1427 aa		4.59	□□□□□ -1.67
YPR158C-D	YPR158C-D	YKL133C	P36066	463 aa		4.58	□□□□□ -1.68
YPR158C-D	YPR158C-D	UBX2	Q04228	584 aa		4.58	□□□□□ -1.68
YPR158C-D	YPR158C-D	STU1	P38198	1513 aa		4.58	□□□□□ -1.68
YPR158C-D	YPR158C-D	SIS2	P36024	562 aa		4.58	□□□□□ -1.68
YPR158C-D	YPR158C-D	PUS6	P53294	404 aa		4.58	□□□□□ -1.68
YPR158C-D	YPR158C-D	SGD1	Q06132	899 aa		4.58	□□□□□ -1.68
YPR158C-D	YPR158C-D	IOC3	P43596	787 aa		4.58	□□□□□ -1.68
YPR158C-D	YPR158C-D	YOL036W	Q08206	761 aa		4.58	□□□□□ -1.68
YPR158C-D	YPR158C-D	SPT2	P06843	333 aa	Predicted RBP	4.57	□□□□□ -1.68
YPR158C-D	YPR158C-D	DSF2	P38213	736 aa		4.57	□□□□□ -1.68
YPR158C-D	YPR158C-D	THS1	P04801	734 aa	Known RBP	4.57	□□□□□ -1.68
YPR158C-D	YPR158C-D	UTP22	P53254	1237 aa	Predicted RBP	4.57	□□□□□ -1.68
YPR158C-D	YPR158C-D	STB3	Q12427	513 aa		4.57	□□□□□ -1.68
YPR158C-D	YPR158C-D	RTG2	P32608	588 aa	Known RBP	4.57	□□□□□ -1.68
YPR158C-D	YPR158C-D	GRX1	P25373	110 aa	Known RBP	4.56	□□□□□ -1.68
YPR158C-D	YPR158C-D	IRE1	P32361	1115 aa		4.56	□□□□□ -1.68
YPR158C-D	YPR158C-D	RAD9	P14737	1309 aa		4.56	□□□□□ -1.68
YPR158C-D	YPR158C-D	SPT21	P35209	758 aa		4.56	□□□□□ -1.68
YPR158C-D	YPR158C-D	FMP30	Q02883	468 aa		4.56	□□□□□ -1.68
YPR158C-D	YPR158C-D	YKR018C	P36114	725 aa		4.56	□□□□□ -1.68
YPR158C-D	YPR158C-D	PUS5	Q06244	254 aa		4.56	□□□□□ -1.68
YPR158C-D	YPR158C-D	YPR084W	Q06821	456 aa		4.56	□□□□□ -1.68
YPR158C-D	YPR158C-D	IPL1	P38991	367 aa		4.56	□□□□□ -1.68
YPR158C-D	YPR158C-D	TAF8	Q03750	510 aa		4.55	□□□□□ -1.68
YPR158C-D	YPR158C-D	TUM1	Q08686	304 aa	Known RBP	4.55	□□□□□ -1.68
YPR158C-D	YPR158C-D	AAD16	Q02895	342 aa		4.55	□□□□□ -1.68
YPR158C-D	YPR158C-D	RPP2B	P02400	110 aa	Known RBP	4.54	□□□□□ -1.68
YPR158C-D	YPR158C-D	MCD4	P36051	919 aa		4.54	□□□□□ -1.68
YPR158C-D	YPR158C-D	ULS1	Q08562	1619 aa		4.54	□□□□□ -1.68
YPR158C-D	YPR158C-D	SVF1	Q05515	481 aa		4.54	□□□□□ -1.68
YPR158C-D	YPR158C-D	SAS4	Q04003	481 aa		4.54	□□□□□ -1.68
YPR158C-D	YPR158C-D	ENP2	P48234	707 aa	Known RBP	4.54	□□□□□ -1.68
YPR158C-D	YPR158C-D	SSA4	P22202	642 aa	Known RBP	4.53	□□□□□ -1.68
YPR158C-D	YPR158C-D	YNR029C	P53729	429 aa	Known RBP	4.53	□□□□□ -1.68
YPR158C-D	YPR158C-D	NOP53	Q12080	455 aa	Known RBP	4.53	□□□□□ -1.68
YPR158C-D	YPR158C-D	IML1	P47170	1584 aa		4.53	□□□□□ -1.68
YPR158C-D	YPR158C-D	CSE4	P36012	229 aa		4.53	□□□□□ -1.68
YPR158C-D	YPR158C-D	NTE1	Q04958	1679 aa		4.53	□□□□□ -1.68
YPR158C-D	YPR158C-D	TSC11	P40061	1430 aa		4.53	□□□□□ -1.68
YPR158C-D	YPR158C-D	SMY2	P32909	740 aa	Known RBP	4.53	□□□□□ -1.68
YPR158C-D	YPR158C-D	OYE3	P41816	400 aa	Predicted RBP	4.52	□□□□□ -1.69
YPR158C-D	YPR158C-D	VPS53	P47061	822 aa		4.52	□□□□□ -1.69
YPR158C-D	YPR158C-D	MAM3	Q12296	706 aa		4.52	□□□□□ -1.69
YPR158C-D	YPR158C-D	GPT2	P36148	743 aa		4.52	□□□□□ -1.69
YPR158C-D	YPR158C-D	YDL129W	Q07555	291 aa		4.52	□□□□□ -1.69
YPR158C-D	YPR158C-D	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
YPR158C-D	YPR158C-D	BRE1	Q07457	700 aa	Known RBP	4.52	□□□□□ -1.69
YPR158C-D	YPR158C-D	NYV1	Q12255	253 aa		4.52	□□□□□ -1.69
YPR158C-D	YPR158C-D	RET1	P22276	1149 aa	Known RBP	4.52	□□□□□ -1.69
YPR158C-D	YPR158C-D	DNF2	Q12675	1612 aa		4.52	□□□□□ -1.69
YPR158C-D	YPR158C-D	YNR014W	P53719	212 aa		4.52	□□□□□ -1.69
YPR158C-D	YPR158C-D	YKU70	P32807	602 aa		4.51	□□□□□ -1.69
YPR158C-D	YPR158C-D	KGD2	P19262	463 aa	Predicted RBP	4.51	□□□□□ -1.69
YPR158C-D	YPR158C-D	IDI1	P15496	288 aa		4.5	□□□□□ -1.69
YPR158C-D	YPR158C-D	ATG2	P53855	1592 aa		4.5	□□□□□ -1.69
YPR158C-D	YPR158C-D	CST9	Q06032	482 aa		4.5	□□□□□ -1.69
YPR158C-D	YPR158C-D	TY3A-G	Q12173	290 aa		4.5	□□□□□ -1.69
YPR158C-D	YPR158C-D	TY3A-I	Q99219	290 aa		4.5	□□□□□ -1.69
YPR158C-D	YPR158C-D	SPR3	P41901	512 aa		4.5	□□□□□ -1.69
YPR158C-D	YPR158C-D	YMR084W	A2P2R3	262 aa		4.5	□□□□□ -1.69
YPR158C-D	YPR158C-D	RGD1	P38339	666 aa		4.5	□□□□□ -1.69
YPR158C-D	YPR158C-D	PSF2	P40359	213 aa		4.49	□□□□□ -1.69
YPR158C-D	YPR158C-D	CWH41	P53008	833 aa		4.49	□□□□□ -1.69
YPR158C-D	YPR158C-D	YBP2	P53169	641 aa		4.49	□□□□□ -1.69
YPR158C-D	YPR158C-D	SDH5	Q08230	162 aa		4.49	□□□□□ -1.69
YPR158C-D	YPR158C-D	FMO1	P38866	432 aa		4.49	□□□□□ -1.69
YPR158C-D	YPR158C-D	PKH1	Q03407	766 aa		4.49	□□□□□ -1.69
YPR158C-D	YPR158C-D	ALD4	P46367	519 aa	Known RBP	4.48	□□□□□ -1.69
YPR158C-D	YPR158C-D	LYS14	P40971	790 aa		4.48	□□□□□ -1.69
YPR158C-D	YPR158C-D	NST1	P53935	1240 aa		4.48	□□□□□ -1.69
YPR158C-D	YPR158C-D	PSF3	Q12146	194 aa		4.48	□□□□□ -1.69
YPR158C-D	YPR158C-D	PTP3	P40048	928 aa		4.48	□□□□□ -1.69
YPR158C-D	YPR158C-D	RPN1	P38764	993 aa	Known RBP	4.48	□□□□□ -1.69
YPR158C-D	YPR158C-D	FAA4	P47912	694 aa	Known RBP	4.48	□□□□□ -1.69
YPR158C-D	YPR158C-D	SIR4	P11978	1358 aa		4.48	□□□□□ -1.69
YPR158C-D	YPR158C-D	VAB2	P40003	282 aa		4.47	□□□□□ -1.69
YPR158C-D	YPR158C-D	FET4	P40988	552 aa		4.47	□□□□□ -1.69
YPR158C-D	YPR158C-D	BCK1	Q01389	1478 aa		4.47	□□□□□ -1.69
YPR158C-D	YPR158C-D	RAT1	Q02792	1006 aa	Known RBP	4.47	□□□□□ -1.69
YPR158C-D	YPR158C-D	FRD1	P32614	470 aa	Known RBP	4.46	□□□□□ -1.69
YPR158C-D	YPR158C-D	MET7	Q08645	548 aa		4.46	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms