RNA–Protein interactions for RNA: YPR026W

ATH1, Transcript of Acid trehalase required for utilization of extracellular trehalose, yeastyeast

Gene ATH1, Length 3,636 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATH1YPR026W SSF1P38789 453 aaPredicted RBP6.3□□□□□ -1.4
ATH1YPR026W GCN2P15442 1659 aa6.3□□□□□ -1.4
ATH1YPR026W RPG1P38249 964 aaKnown RBP6.3□□□□□ -1.4
ATH1YPR026W PDR1P12383 1068 aa6.29□□□□□ -1.4
ATH1YPR026W YPR148CQ06523 435 aa6.29□□□□□ -1.4
ATH1YPR026W ZDS1P50111 915 aaKnown RBP6.29□□□□□ -1.4
ATH1YPR026W FAP1P53971 965 aa6.29□□□□□ -1.4
ATH1YPR026W AIM21P40563 679 aa6.28□□□□□ -1.4
ATH1YPR026W NUP188P52593 1655 aaKnown RBP6.27□□□□□ -1.41
ATH1YPR026W KIP3P53086 805 aaKnown RBP6.27□□□□□ -1.41
ATH1YPR026W DNF3Q12674 1656 aa6.26□□□□□ -1.41
ATH1YPR026W ISW2Q08773 1120 aa6.26□□□□□ -1.41
ATH1YPR026W OSW7P43611 510 aa6.25□□□□□ -1.41
ATH1YPR026W TAF13P11747 167 aa6.24□□□□□ -1.41
ATH1YPR026W SLX8P40072 274 aa6.24□□□□□ -1.41
ATH1YPR026W GRX3Q03835 250 aa6.24□□□□□ -1.41
ATH1YPR026W ASF1P32447 279 aa6.24□□□□□ -1.41
ATH1YPR026W SPT16P32558 1035 aaKnown RBP6.24□□□□□ -1.41
ATH1YPR026W RPA135P22138 1203 aaKnown RBP6.24□□□□□ -1.41
ATH1YPR026W GEF1P37020 779 aa6.24□□□□□ -1.41
ATH1YPR026W TLG1Q03322 224 aa6.24□□□□□ -1.41
ATH1YPR026W VMR1P38735 1592 aa6.21□□□□□ -1.41
ATH1YPR026W MRX12P47084 519 aa6.21□□□□□ -1.42
ATH1YPR026W MPP10P47083 593 aaKnown RBP6.21□□□□□ -1.42
ATH1YPR026W PAM1P37304 830 aaKnown RBP6.2□□□□□ -1.42
ATH1YPR026W BRE1Q07457 700 aaKnown RBP6.2□□□□□ -1.42
ATH1YPR026W GEA1P47102 1408 aaPredicted RBP6.2□□□□□ -1.42
ATH1YPR026W YSP2Q06681 1438 aa6.19□□□□□ -1.42
ATH1YPR026W YIL055CP40523 627 aaKnown RBP6.18□□□□□ -1.42
ATH1YPR026W GAL11P19659 1081 aa6.18□□□□□ -1.42
ATH1YPR026W CKB1P43639 278 aa6.18□□□□□ -1.42
ATH1YPR026W PMC1P38929 1173 aaPredicted RBP6.17□□□□□ -1.42
ATH1YPR026W MAM3Q12296 706 aa6.16□□□□□ -1.42
ATH1YPR026W TY1B-NL2Q99337 1749 aaKnown RBP6.16□□□□□ -1.42
ATH1YPR026W RPS0AP32905 252 aaKnown RBP6.14□□□□□ -1.43
ATH1YPR026W MPE1P35728 441 aaKnown RBP6.14□□□□□ -1.43
ATH1YPR026W UBX5Q06682 500 aa6.14□□□□□ -1.43
ATH1YPR026W DOS2P54858 310 aa6.14□□□□□ -1.43
ATH1YPR026W YMR196WQ04336 1088 aa6.14□□□□□ -1.43
ATH1YPR026W SPT7P35177 1332 aa6.14□□□□□ -1.43
ATH1YPR026W NOP7P53261 605 aaKnown RBP6.14□□□□□ -1.43
ATH1YPR026W SPT2P06843 333 aaPredicted RBP6.13□□□□□ -1.43
ATH1YPR026W MCM1P11746 286 aa6.13□□□□□ -1.43
ATH1YPR026W PSK2Q08217 1101 aa6.13□□□□□ -1.43
ATH1YPR026W IML1P47170 1584 aa6.12□□□□□ -1.43
ATH1YPR026W QCR6P00127 147 aa6.12□□□□□ -1.43
ATH1YPR026W NUP192P47054 1683 aa6.12□□□□□ -1.43
ATH1YPR026W OCA5P38738 679 aa6.12□□□□□ -1.43
ATH1YPR026W TY4A-JP47023 414 aa6.12□□□□□ -1.43
ATH1YPR026W RAD2P07276 1031 aa6.11□□□□□ -1.43
ATH1YPR026W SPB4P25808 606 aaPredicted RBP6.1□□□□□ -1.43
ATH1YPR026W MET10P39692 1035 aa6.1□□□□□ -1.43
ATH1YPR026W ALD4P46367 519 aaKnown RBP6.1□□□□□ -1.43
ATH1YPR026W RPT2P40327 437 aaKnown RBP6.1□□□□□ -1.43
ATH1YPR026W MMS1Q06211 1407 aa6.09□□□□□ -1.43
ATH1YPR026W DRS2P39524 1355 aa6.09□□□□□ -1.43
ATH1YPR026W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
ATH1YPR026W GIR2Q03768 265 aaPredicted RBP6.08□□□□□ -1.44
ATH1YPR026W SEC20P28791 383 aa6.07□□□□□ -1.44
ATH1YPR026W SRB8P25648 1427 aa6.06□□□□□ -1.44
ATH1YPR026W MEH1Q02205 184 aa6.06□□□□□ -1.44
ATH1YPR026W RRN6P32786 894 aa6.06□□□□□ -1.44
ATH1YPR026W NUP157P40064 1391 aaKnown RBP6.05□□□□□ -1.44
ATH1YPR026W SUB2Q07478 446 aaKnown RBP6.05□□□□□ -1.44
ATH1YPR026W TY1B-AO13527 1196 aaKnown RBP6.04□□□□□ -1.44
ATH1YPR026W NFU1P32860 256 aa6.04□□□□□ -1.44
ATH1YPR026W TOM20P35180 183 aa6.03□□□□□ -1.44
ATH1YPR026W SEC9P40357 651 aa6.03□□□□□ -1.44
ATH1YPR026W USO1P25386 1790 aa6.03□□□□□ -1.44
ATH1YPR026W SPT21P35209 758 aa6.03□□□□□ -1.44
ATH1YPR026W GDE1Q02979 1223 aa6.03□□□□□ -1.44
ATH1YPR026W PKH1Q03407 766 aa6.03□□□□□ -1.44
ATH1YPR026W RAD51P25454 400 aa6.02□□□□□ -1.45
ATH1YPR026W NAB3P38996 802 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
ATH1YPR026W SVL3Q03088 825 aaKnown RBP6.02□□□□□ -1.45
ATH1YPR026W PLP2Q12017 286 aa6.02□□□□□ -1.45
ATH1YPR026W SSA4P22202 642 aaKnown RBP6.01□□□□□ -1.45
ATH1YPR026W NMD3P38861 518 aaKnown RBP6.01□□□□□ -1.45
ATH1YPR026W PES4P39684 611 aa6.01□□□□□ -1.45
ATH1YPR026W YDL121CQ07541 149 aa6.01□□□□□ -1.45
ATH1YPR026W MTR4P47047 1073 aaKnown RBP6.01□□□□□ -1.45
ATH1YPR026W NOP53Q12080 455 aaKnown RBP6.01□□□□□ -1.45
ATH1YPR026W NPL4P33755 580 aa6□□□□□ -1.45
ATH1YPR026W IKI3Q06706 1349 aaKnown RBP6□□□□□ -1.45
ATH1YPR026W HOS4P40480 1083 aa6□□□□□ -1.45
ATH1YPR026W TAF1P46677 1066 aa5.99□□□□□ -1.45
ATH1YPR026W YAF9P53930 226 aa5.99□□□□□ -1.45
ATH1YPR026W PEA2P40091 420 aa5.99□□□□□ -1.45
ATH1YPR026W CEF1Q03654 590 aaPredicted RBP5.99□□□□□ -1.45
ATH1YPR026W SNU66Q12420 587 aaPredicted RBP5.99□□□□□ -1.45
ATH1YPR026W POL5P39985 1022 aaKnown RBP5.99□□□□□ -1.45
ATH1YPR026W CDC45Q08032 650 aa5.99□□□□□ -1.45
ATH1YPR026W ERP2P39704 215 aa5.98□□□□□ -1.45
ATH1YPR026W CST6P40535 587 aa5.98□□□□□ -1.45
ATH1YPR026W SSF2Q12153 453 aaPredicted RBP5.98□□□□□ -1.45
ATH1YPR026W HSP82P02829 709 aaKnown RBP5.98□□□□□ -1.45
ATH1YPR026W KIN1P13185 1064 aa5.98□□□□□ -1.45
ATH1YPR026W ENP1P38333 483 aaKnown RBP5.98□□□□□ -1.45
ATH1YPR026W FAF1P40546 346 aaPredicted RBP5.98□□□□□ -1.45
ATH1YPR026W ITT1Q04638 464 aa5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms