RNA–Protein interactions for RNA: YLR385C

SWC7, Transcript of Protein of unknown function, yeast

Gene SWC7, Length 399 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC7	YLR385C	ERG12	P07277	443 aa		4.96	□□□□□ -1.62
SWC7	YLR385C	TIF4632	P39936	914 aa	Known RBP	4.96	□□□□□ -1.62
SWC7	YLR385C	RPL34B	P40525	121 aa	Known RBP	4.96	□□□□□ -1.62
SWC7	YLR385C	RSM7	P47150	247 aa		4.96	□□□□□ -1.62
SWC7	YLR385C	DNM1	P54861	757 aa		4.96	□□□□□ -1.62
SWC7	YLR385C	COG4	Q06096	861 aa		4.96	□□□□□ -1.62
SWC7	YLR385C	RRP15	Q06511	250 aa	Predicted RBP	4.96	□□□□□ -1.62
SWC7	YLR385C	PSK2	Q08217	1101 aa		4.96	□□□□□ -1.62
SWC7	YLR385C	KAR1	P11927	433 aa		4.95	□□□□□ -1.62
SWC7	YLR385C	SEC20	P28791	383 aa		4.95	□□□□□ -1.62
SWC7	YLR385C	BIO2	P32451	375 aa		4.95	□□□□□ -1.62
SWC7	YLR385C	CDC27	P38042	758 aa		4.95	□□□□□ -1.62
SWC7	YLR385C	IES1	P43579	692 aa		4.95	□□□□□ -1.62
SWC7	YLR385C	ESF2	P53743	316 aa	Known RBP	4.95	□□□□□ -1.62
SWC7	YLR385C	OYE2	Q03558	400 aa	Known RBP	4.95	□□□□□ -1.62
SWC7	YLR385C	SSF2	Q12153	453 aa	Predicted RBP	4.95	□□□□□ -1.62
SWC7	YLR385C	ERP4	Q12450	207 aa		4.95	□□□□□ -1.62
SWC7	YLR385C	NKP1	Q12493	238 aa		4.95	□□□□□ -1.62
SWC7	YLR385C	CIT2	P08679	460 aa		4.94	□□□□□ -1.62
SWC7	YLR385C	TIF1	P10081	395 aa	Known RBP	4.94	□□□□□ -1.62
SWC7	YLR385C	GRX4	P32642	244 aa		4.94	□□□□□ -1.62
SWC7	YLR385C	BLI1	P35727	113 aa		4.94	□□□□□ -1.62
SWC7	YLR385C	PWP2	P25635	923 aa	Known RBP	4.93	□□□□□ -1.62
SWC7	YLR385C	CEF1	Q03654	590 aa	Predicted RBP	4.93	□□□□□ -1.62
SWC7	YLR385C	POB3	Q04636	552 aa	Known RBP	4.93	□□□□□ -1.62
SWC7	YLR385C	NSE3	Q05541	303 aa		4.93	□□□□□ -1.62
SWC7	YLR385C	ENT2	Q05785	613 aa		4.93	□□□□□ -1.62
SWC7	YLR385C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
SWC7	YLR385C	SRP40	P32583	406 aa	Predicted RBP	4.92	□□□□□ -1.62
SWC7	YLR385C	NFU1	P32860	256 aa		4.92	□□□□□ -1.62
SWC7	YLR385C	YKR023W	P36119	530 aa	Known RBP	4.92	□□□□□ -1.62
SWC7	YLR385C	PSD2	P53037	1138 aa	Known RBP	4.92	□□□□□ -1.62
SWC7	YLR385C	YML083C	Q04526	418 aa		4.92	□□□□□ -1.62
SWC7	YLR385C	YPR204W	Q08995	1032 aa		4.92	□□□□□ -1.62
SWC7	YLR385C	OPI1	P21957	404 aa		4.91	□□□□□ -1.62
SWC7	YLR385C	YKL091C	P33324	310 aa	Known RBP	4.91	□□□□□ -1.62
SWC7	YLR385C	MAG2	Q06436	670 aa	Known RBP	4.91	□□□□□ -1.62
SWC7	YLR385C	ATE1	P16639	503 aa		4.9	□□□□□ -1.63
SWC7	YLR385C	RPN12	P32496	274 aa		4.9	□□□□□ -1.63
SWC7	YLR385C	SEC6	P32844	805 aa		4.9	□□□□□ -1.63
SWC7	YLR385C	VPS24	P36095	224 aa	Known RBP	4.9	□□□□□ -1.63
SWC7	YLR385C	GRX7	P38068	203 aa		4.9	□□□□□ -1.63
SWC7	YLR385C	FUI1	P38196	639 aa		4.9	□□□□□ -1.63
SWC7	YLR385C	IOC3	P43596	787 aa		4.9	□□□□□ -1.63
SWC7	YLR385C	POL32	P47110	350 aa		4.9	□□□□□ -1.63
SWC7	YLR385C	YGL081W	P53156	320 aa		4.9	□□□□□ -1.63
SWC7	YLR385C	JIP5	Q06214	492 aa	Predicted RBP	4.9	□□□□□ -1.63
SWC7	YLR385C	TY4B-P	A0A0B7P3V8	1104 aa		4.89	□□□□□ -1.63
SWC7	YLR385C	REF2	P42073	533 aa	Predicted RBP	4.89	□□□□□ -1.63
SWC7	YLR385C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
SWC7	YLR385C	SVL3	Q03088	825 aa	Known RBP	4.89	□□□□□ -1.63
SWC7	YLR385C	MSC6	Q08818	692 aa	Known RBP	4.89	□□□□□ -1.63
SWC7	YLR385C	SNU66	Q12420	587 aa	Predicted RBP	4.89	□□□□□ -1.63
SWC7	YLR385C	TY4A-H	Q6Q5P6	413 aa		4.89	□□□□□ -1.63
SWC7	YLR385C	TRX2	P22803	104 aa	Known RBP	4.88	□□□□□ -1.63
SWC7	YLR385C	PUP1	P25043	261 aa		4.88	□□□□□ -1.63
SWC7	YLR385C	MAL31	P38156	614 aa		4.88	□□□□□ -1.63
SWC7	YLR385C	ENP1	P38333	483 aa	Known RBP	4.88	□□□□□ -1.63
SWC7	YLR385C	NMD3	P38861	518 aa	Known RBP	4.88	□□□□□ -1.63
SWC7	YLR385C	FAF1	P40546	346 aa	Predicted RBP	4.88	□□□□□ -1.63
SWC7	YLR385C	YBL113C	Q7M4S9	792 aa		4.88	□□□□□ -1.63
SWC7	YLR385C	THS1	P04801	734 aa	Known RBP	4.87	□□□□□ -1.63
SWC7	YLR385C	RTG2	P32608	588 aa	Known RBP	4.87	□□□□□ -1.63
SWC7	YLR385C	MUM2	P38236	366 aa		4.87	□□□□□ -1.63
SWC7	YLR385C	PPX1	P38698	397 aa		4.87	□□□□□ -1.63
SWC7	YLR385C	VAC8	P39968	578 aa		4.87	□□□□□ -1.63
SWC7	YLR385C	RTT106	P40161	455 aa		4.87	□□□□□ -1.63
SWC7	YLR385C	SYH1	Q02875	849 aa	Known RBP	4.87	□□□□□ -1.63
SWC7	YLR385C	YGR161W-C	Q3E744	92 aa		4.87	□□□□□ -1.63
SWC7	YLR385C	DPB3	P27344	201 aa		4.86	□□□□□ -1.63
SWC7	YLR385C	SEC8	P32855	1065 aa		4.86	□□□□□ -1.63
SWC7	YLR385C	CSN12	P47130	423 aa		4.86	□□□□□ -1.63
SWC7	YLR385C	PLP2	Q12017	286 aa		4.86	□□□□□ -1.63
SWC7	YLR385C	QCR6	P00127	147 aa		4.85	□□□□□ -1.63
SWC7	YLR385C	GLO3	P38682	493 aa	Known RBP	4.85	□□□□□ -1.63
SWC7	YLR385C	ERP5	P38819	212 aa		4.85	□□□□□ -1.63
SWC7	YLR385C	UBP12	P39538	1254 aa		4.85	□□□□□ -1.63
SWC7	YLR385C	YJR142W	P47173	342 aa		4.85	□□□□□ -1.63
SWC7	YLR385C	ALD3	P54114	506 aa		4.85	□□□□□ -1.63
SWC7	YLR385C	MDM1	Q01846	1127 aa		4.85	□□□□□ -1.63
SWC7	YLR385C	PKH1	Q03407	766 aa		4.85	□□□□□ -1.63
SWC7	YLR385C	RPN4	Q03465	531 aa		4.85	□□□□□ -1.63
SWC7	YLR385C	HSP82	P02829	709 aa	Known RBP	4.84	□□□□□ -1.63
SWC7	YLR385C	HSC82	P15108	705 aa	Known RBP	4.84	□□□□□ -1.63
SWC7	YLR385C	MNN1	P39106	762 aa		4.84	□□□□□ -1.63
SWC7	YLR385C	ITC1	P53125	1264 aa		4.84	□□□□□ -1.63
SWC7	YLR385C	GDE1	Q02979	1223 aa		4.84	□□□□□ -1.63
SWC7	YLR385C	IMH1	Q06704	911 aa	Known RBP	4.84	□□□□□ -1.63
SWC7	YLR385C	STB3	Q12427	513 aa		4.84	□□□□□ -1.63
SWC7	YLR385C	TY1B-A	O13527	1196 aa	Known RBP	4.83	□□□□□ -1.64
SWC7	YLR385C	SWI3	P32591	825 aa		4.83	□□□□□ -1.64
SWC7	YLR385C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
SWC7	YLR385C	YBL036C	P38197	257 aa		4.83	□□□□□ -1.64
SWC7	YLR385C	YHL050C	P38721	697 aa		4.83	□□□□□ -1.64
SWC7	YLR385C	YHR219W	P38900	624 aa		4.83	□□□□□ -1.64
SWC7	YLR385C	YEN1	P40028	759 aa		4.83	□□□□□ -1.64
SWC7	YLR385C	BUD6	P41697	788 aa		4.83	□□□□□ -1.64
SWC7	YLR385C	ATG1	P53104	897 aa		4.83	□□□□□ -1.64
SWC7	YLR385C	VMS1	Q04311	632 aa	Known RBP	4.83	□□□□□ -1.64
SWC7	YLR385C	PUS1	Q12211	544 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms