RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	MAD1	P40957	749 aa		2.41	□□□□□ -2.02
YCS4	YLR272C	MID1	P41821	548 aa		2.41	□□□□□ -2.02
YCS4	YLR272C	YBL113C	Q7M4S9	792 aa		2.41	□□□□□ -2.02
YCS4	YLR272C	SNU71	P53207	620 aa	Known RBP	2.41	□□□□□ -2.02
YCS4	YLR272C	PUN1	Q06991	263 aa		2.41	□□□□□ -2.02
YCS4	YLR272C	OYE2	Q03558	400 aa	Known RBP	2.4	□□□□□ -2.02
YCS4	YLR272C	GLO3	P38682	493 aa	Known RBP	2.4	□□□□□ -2.03
YCS4	YLR272C	PDI1	P17967	522 aa	Known RBP	2.39	□□□□□ -2.03
YCS4	YLR272C	KIP2	P28743	706 aa		2.39	□□□□□ -2.03
YCS4	YLR272C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	2.39	□□□□□ -2.03	not detected
YCS4	YLR272C	RRN6	P32786	894 aa		2.39	□□□□□ -2.03
YCS4	YLR272C	TTI1	P36097	1038 aa		2.39	□□□□□ -2.03
YCS4	YLR272C	NIS1	P53939	407 aa		2.39	□□□□□ -2.03
YCS4	YLR272C	PML39	Q03760	334 aa		2.39	□□□□□ -2.03
YCS4	YLR272C	YOL036W	Q08206	761 aa		2.39	□□□□□ -2.03
YCS4	YLR272C	ENO2	P00925	437 aa	Known RBP	2.38	□□□□□ -2.03
YCS4	YLR272C	KTR1	P27810	393 aa	Known RBP	2.38	□□□□□ -2.03
YCS4	YLR272C	YGR273C	P53329	174 aa		2.38	□□□□□ -2.03
YCS4	YLR272C	YDL206W	Q12424	762 aa		2.38	□□□□□ -2.03
YCS4	YLR272C	YPR148C	Q06523	435 aa		2.38	□□□□□ -2.03
YCS4	YLR272C	MIP1	P15801	1254 aa		2.37	□□□□□ -2.03
YCS4	YLR272C	EMP47	P43555	445 aa		2.37	□□□□□ -2.03
YCS4	YLR272C	HPC2	Q01448	625 aa		2.37	□□□□□ -2.03
YCS4	YLR272C	GYP1	Q08484	637 aa		2.37	□□□□□ -2.03
YCS4	YLR272C	TRM1	P15565	570 aa	Known RBP	2.37	□□□□□ -2.03
YCS4	YLR272C	POL32	P47110	350 aa		2.37	□□□□□ -2.03
YCS4	YLR272C	SOH1	P38633	127 aa		2.37	□□□□□ -2.03
YCS4	YLR272C	SRP40	P32583	406 aa	Predicted RBP	2.36	□□□□□ -2.03
YCS4	YLR272C	IPL1	P38991	367 aa		2.36	□□□□□ -2.03
YCS4	YLR272C	YEL023C	P39992	682 aa		2.36	□□□□□ -2.03
YCS4	YLR272C	SUT1	P53032	299 aa	Known RBP	2.36	□□□□□ -2.03
YCS4	YLR272C	ECM2	P38241	364 aa	Known RBP	2.36	□□□□□ -2.03
YCS4	YLR272C	SVF1	Q05515	481 aa		2.36	□□□□□ -2.03
YCS4	YLR272C	FUR4	P05316	633 aa	Known RBP	2.35	□□□□□ -2.03
YCS4	YLR272C	TGL4	P36165	910 aa		2.35	□□□□□ -2.03
YCS4	YLR272C	BMT6	Q12291	365 aa		2.35	□□□□□ -2.03
YCS4	YLR272C	RTG1	P32607	177 aa		2.35	□□□□□ -2.03
YCS4	YLR272C	FRK1	Q03002	865 aa	Predicted RBP	2.35	□□□□□ -2.03
YCS4	YLR272C	ERF2	Q06551	359 aa		2.35	□□□□□ -2.03
YCS4	YLR272C	LDB19	Q12502	818 aa		2.35	□□□□□ -2.03
YCS4	YLR272C	NUD1	P32336	851 aa		2.35	□□□□□ -2.03
YCS4	YLR272C	YKL091C	P33324	310 aa	Known RBP	2.35	□□□□□ -2.03
YCS4	YLR272C	PAT1	P25644	796 aa	Known RBP	2.34	□□□□□ -2.03
YCS4	YLR272C	ALA1	P40825	983 aa	Known RBP	2.34	□□□□□ -2.03
YCS4	YLR272C	RRN7	P40992	514 aa		2.34	□□□□□ -2.03
YCS4	YLR272C	CLB5	P30283	435 aa		2.34	□□□□□ -2.03
YCS4	YLR272C	APP1	P53933	587 aa		2.34	□□□□□ -2.03
YCS4	YLR272C	NCR1	Q12200	1170 aa		2.34	□□□□□ -2.03
YCS4	YLR272C	YEL077C	Q3E7X8	1277 aa		2.34	□□□□□ -2.03
YCS4	YLR272C	GAR1	P28007	205 aa	Known RBP	2.34	□□□□□ -2.04
YCS4	YLR272C	MGE1	P38523	228 aa		2.34	□□□□□ -2.04
YCS4	YLR272C	PDR1	P12383	1068 aa		2.33	□□□□□ -2.04
YCS4	YLR272C	RGR1	P19263	1082 aa		2.33	□□□□□ -2.04
YCS4	YLR272C	PRI2	P20457	528 aa		2.33	□□□□□ -2.04
YCS4	YLR272C	NOB1	Q08444	459 aa	Known RBP	2.33	□□□□□ -2.04
YCS4	YLR272C	MCM2	P29469	868 aa		2.33	□□□□□ -2.04
YCS4	YLR272C	PSE1	P32337	1089 aa	Known RBP	2.33	□□□□□ -2.04
YCS4	YLR272C	TBS1	P38114	1094 aa		2.33	□□□□□ -2.04
YCS4	YLR272C	VAC8	P39968	578 aa		2.33	□□□□□ -2.04
YCS4	YLR272C	VAN1	P23642	535 aa		2.33	□□□□□ -2.04
YCS4	YLR272C	ILV3	P39522	585 aa	Known RBP	2.33	□□□□□ -2.04
YCS4	YLR272C	CWH41	P53008	833 aa		2.33	□□□□□ -2.04
YCS4	YLR272C	KXD1	P53158	218 aa		2.33	□□□□□ -2.04
YCS4	YLR272C	SLI15	P38283	698 aa		2.32	□□□□□ -2.04
YCS4	YLR272C	ERP5	P38819	212 aa		2.32	□□□□□ -2.04
YCS4	YLR272C	CSC1	Q06538	782 aa		2.32	□□□□□ -2.04
YCS4	YLR272C	PRE9	P23638	258 aa	Known RBP	2.32	□□□□□ -2.04
YCS4	YLR272C	PUP1	P25043	261 aa		2.32	□□□□□ -2.04
YCS4	YLR272C	YHL050C	P38721	697 aa		2.32	□□□□□ -2.04
YCS4	YLR272C	YHR219W	P38900	624 aa		2.32	□□□□□ -2.04
YCS4	YLR272C	TIF11	P38912	153 aa	Known RBP	2.32	□□□□□ -2.04
YCS4	YLR272C	MVP1	P40959	511 aa	Known RBP	2.32	□□□□□ -2.04
YCS4	YLR272C	YDR090C	Q03193	310 aa		2.32	□□□□□ -2.04
YCS4	YLR272C	YOR131C	Q12486	218 aa		2.32	□□□□□ -2.04
YCS4	YLR272C	SPT16	P32558	1035 aa	Known RBP	2.31	□□□□□ -2.04
YCS4	YLR272C	PUS5	Q06244	254 aa		2.31	□□□□□ -2.04
YCS4	YLR272C	WRS1	Q12109	432 aa	Known RBP	2.31	□□□□□ -2.04
YCS4	YLR272C	SRF1	Q12516	437 aa		2.31	□□□□□ -2.04
YCS4	YLR272C	BRN1	P38170	754 aa		2.31	□□□□□ -2.04
YCS4	YLR272C	YHL008C	P38750	627 aa		2.31	□□□□□ -2.04
YCS4	YLR272C	DAN4	P47179	1161 aa		2.31	□□□□□ -2.04
YCS4	YLR272C	MCM16	Q12262	181 aa		2.31	□□□□□ -2.04
YCS4	YLR272C	TEC1	P18412	486 aa		2.31	□□□□□ -2.04
YCS4	YLR272C	NMA111	P53920	997 aa		2.31	□□□□□ -2.04
YCS4	YLR272C	TRP5	P00931	707 aa	Known RBP	2.3	□□□□□ -2.04
YCS4	YLR272C	ALD6	P54115	500 aa	Known RBP	2.3	□□□□□ -2.04
YCS4	YLR272C	STE20	Q03497	939 aa	Known RBP	2.3	□□□□□ -2.04
YCS4	YLR272C	IXR1	P33417	597 aa		2.3	□□□□□ -2.04
YCS4	YLR272C	MET1	P36150	593 aa		2.3	□□□□□ -2.04
YCS4	YLR272C	PUS6	P53294	404 aa		2.3	□□□□□ -2.04
YCS4	YLR272C	BDS1	Q08347	646 aa		2.3	□□□□□ -2.04
YCS4	YLR272C	GUT2	P32191	649 aa		2.3	□□□□□ -2.04
YCS4	YLR272C	STM1	P39015	273 aa	Known RBP	2.3	□□□□□ -2.04
YCS4	YLR272C	ISR1	Q06098	443 aa	Known RBP	2.3	□□□□□ -2.04
YCS4	YLR272C	LAM6	Q08001	693 aa		2.3	□□□□□ -2.04
YCS4	YLR272C	ALR1	Q08269	859 aa		2.3	□□□□□ -2.04
YCS4	YLR272C	CDC53	Q12018	815 aa	Known RBP	2.3	□□□□□ -2.04
YCS4	YLR272C	EAP1	P36041	632 aa	Known RBP	2.29	□□□□□ -2.04
YCS4	YLR272C	UTP7	P40055	554 aa	Known RBP	2.29	□□□□□ -2.04
YCS4	YLR272C	ALD4	P46367	519 aa	Known RBP	2.29	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms