RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C DNF1P32660 1571 aa4.17□□□□□ -1.74
SPT4YGR063C TY3B-GQ99315 1547 aa4.16□□□□□ -1.74
SPT4YGR063C MSH3P25336 1018 aa4.16□□□□□ -1.74
SPT4YGR063C SWI3P32591 825 aa4.16□□□□□ -1.74
SPT4YGR063C SLX5P32828 619 aaKnown RBP4.16□□□□□ -1.74
SPT4YGR063C MED8P38304 223 aa4.16□□□□□ -1.74
SPT4YGR063C SSP1P38871 571 aa4.16□□□□□ -1.74
SPT4YGR063C EPS1P40557 701 aa4.16□□□□□ -1.74
SPT4YGR063C RNT1Q02555 471 aa4.16□□□□□ -1.74
SPT4YGR063C VPS60Q03390 229 aa4.16□□□□□ -1.74
SPT4YGR063C NOP8Q08287 484 aaPredicted RBP4.16□□□□□ -1.74
SPT4YGR063C TY3B-IQ7LHG5 1498 aaKnown RBP4.16□□□□□ -1.74
SPT4YGR063C ULS1Q08562 1619 aa4.15□□□□□ -1.74
SPT4YGR063C CBF5P33322 483 aaKnown RBP RIP-Chip data4.15□□□□□ -1.75not detected
SPT4YGR063C ECM1P39715 212 aa4.15□□□□□ -1.75
SPT4YGR063C KIP3P53086 805 aaKnown RBP4.15□□□□□ -1.75
SPT4YGR063C VPS72Q03388 795 aa4.15□□□□□ -1.75
SPT4YGR063C YLR271WQ06152 274 aa4.15□□□□□ -1.75
SPT4YGR063C VPS15P22219 1454 aa4.15□□□□□ -1.75
SPT4YGR063C GEA2P39993 1459 aaKnown RBP4.15□□□□□ -1.75
SPT4YGR063C HOS3Q02959 697 aaKnown RBP4.14□□□□□ -1.75
SPT4YGR063C ESC2Q06340 456 aa4.14□□□□□ -1.75
SPT4YGR063C ETT1Q08421 412 aaKnown RBP4.14□□□□□ -1.75
SPT4YGR063C BMS1Q08965 1183 aaKnown RBP4.14□□□□□ -1.75
SPT4YGR063C RPS0AP32905 252 aaKnown RBP4.13□□□□□ -1.75
SPT4YGR063C BDF1P35817 686 aa4.13□□□□□ -1.75
SPT4YGR063C TEA1P47988 759 aa4.13□□□□□ -1.75
SPT4YGR063C YNL050CP53952 270 aa4.13□□□□□ -1.75
SPT4YGR063C RRP15Q06511 250 aaPredicted RBP4.13□□□□□ -1.75
SPT4YGR063C RVB2Q12464 471 aaKnown RBP4.13□□□□□ -1.75
SPT4YGR063C YOL087CQ99247 1116 aa4.13□□□□□ -1.75
SPT4YGR063C ATG2P53855 1592 aa4.13□□□□□ -1.75
SPT4YGR063C MET5P47169 1442 aa4.12□□□□□ -1.75
SPT4YGR063C AI2P03876 854 aa4.12□□□□□ -1.75
SPT4YGR063C RAD2P07276 1031 aa4.12□□□□□ -1.75
SPT4YGR063C CLB1P24868 471 aa4.12□□□□□ -1.75
SPT4YGR063C CLB5P30283 435 aa4.12□□□□□ -1.75
SPT4YGR063C DEP1P31385 405 aa4.12□□□□□ -1.75
SPT4YGR063C SAP190P36123 1033 aa4.12□□□□□ -1.75
SPT4YGR063C RKM3P38222 552 aa4.12□□□□□ -1.75
SPT4YGR063C BBC1P47068 1157 aa4.12□□□□□ -1.75
SPT4YGR063C LCD1Q04377 747 aa4.12□□□□□ -1.75
SPT4YGR063C RPN7Q06103 429 aaKnown RBP4.12□□□□□ -1.75
SPT4YGR063C YSH1Q06224 779 aaPredicted RBP4.12□□□□□ -1.75
SPT4YGR063C YVC1Q12324 675 aa4.12□□□□□ -1.75
SPT4YGR063C DNF2Q12675 1612 aa4.11□□□□□ -1.75
SPT4YGR063C RAD51P25454 400 aa4.11□□□□□ -1.75
SPT4YGR063C TIF4632P39936 914 aaKnown RBP4.11□□□□□ -1.75
SPT4YGR063C STU2P46675 888 aa4.11□□□□□ -1.75
SPT4YGR063C DOS2P54858 310 aa4.11□□□□□ -1.75
SPT4YGR063C HAP5Q02516 242 aa4.11□□□□□ -1.75
SPT4YGR063C ERV41Q04651 352 aa4.11□□□□□ -1.75
SPT4YGR063C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.11□□□□□ -1.75not detected
SPT4YGR063C RAD3P06839 778 aa4.1□□□□□ -1.75
SPT4YGR063C SWE1P32944 819 aa4.1□□□□□ -1.75
SPT4YGR063C MRS2Q01926 470 aa4.1□□□□□ -1.75
SPT4YGR063C VPS30Q02948 557 aa4.1□□□□□ -1.75
SPT4YGR063C ECM16Q04217 1267 aaKnown RBP4.1□□□□□ -1.75
SPT4YGR063C PDS5Q04264 1277 aa4.1□□□□□ -1.75
SPT4YGR063C SEC39Q12745 709 aa4.1□□□□□ -1.75
SPT4YGR063C RPO31P04051 1460 aa4.1□□□□□ -1.75
SPT4YGR063C TGL3P40308 642 aa4.09□□□□□ -1.75
SPT4YGR063C COG8Q04632 607 aa4.09□□□□□ -1.75
SPT4YGR063C APL5Q08951 932 aaKnown RBP4.09□□□□□ -1.75
SPT4YGR063C YRF1-4O13559 1382 aa4.09□□□□□ -1.75
SPT4YGR063C YML133CQ03099 1374 aa4.09□□□□□ -1.75
SPT4YGR063C YLL067CQ07888 1374 aa4.09□□□□□ -1.75
SPT4YGR063C YLL066CQ99208 1374 aa4.09□□□□□ -1.75
SPT4YGR063C HAP1P0CE41 1502 aa4.09□□□□□ -1.75
SPT4YGR063C YBT1P32386 1661 aa4.09□□□□□ -1.76
SPT4YGR063C CEP3P40969 608 aa4.08□□□□□ -1.76
SPT4YGR063C ROM2P51862 1356 aaKnown RBP4.08□□□□□ -1.76
SPT4YGR063C NOP7P53261 605 aaKnown RBP4.08□□□□□ -1.76
SPT4YGR063C PXR1P53335 271 aaPredicted RBP4.08□□□□□ -1.76
SPT4YGR063C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.08□□□□□ -1.76not detected
SPT4YGR063C GRX3Q03835 250 aa4.08□□□□□ -1.76
SPT4YGR063C RLP24Q07915 199 aaKnown RBP4.08□□□□□ -1.76
SPT4YGR063C MDM38Q08179 573 aa4.08□□□□□ -1.76
SPT4YGR063C IQG1Q12280 1495 aa4.07□□□□□ -1.76
SPT4YGR063C AUS1Q08409 1394 aa4.07□□□□□ -1.76
SPT4YGR063C KAR3P17119 729 aa4.07□□□□□ -1.76
SPT4YGR063C ZUO1P32527 433 aaKnown RBP4.07□□□□□ -1.76
SPT4YGR063C SWH1P35845 1188 aa4.07□□□□□ -1.76
SPT4YGR063C PBY1P38254 753 aa4.07□□□□□ -1.76
SPT4YGR063C YMR124WP39523 943 aaKnown RBP4.07□□□□□ -1.76
SPT4YGR063C RIO2P40160 425 aaKnown RBP4.07□□□□□ -1.76
SPT4YGR063C RSC1P53236 928 aa4.07□□□□□ -1.76
SPT4YGR063C SML1Q04964 104 aa4.07□□□□□ -1.76
SPT4YGR063C PUS1Q12211 544 aaKnown RBP4.07□□□□□ -1.76
SPT4YGR063C CAT8P39113 1433 aa4.06□□□□□ -1.76
SPT4YGR063C MSH1P25846 959 aa4.06□□□□□ -1.76
SPT4YGR063C MPE1P35728 441 aaKnown RBP4.06□□□□□ -1.76
SPT4YGR063C RTT107P38850 1070 aa4.06□□□□□ -1.76
SPT4YGR063C IFH1P39520 1085 aa4.06□□□□□ -1.76
SPT4YGR063C ITC1P53125 1264 aa4.06□□□□□ -1.76
SPT4YGR063C ALD3P54114 506 aa4.06□□□□□ -1.76
SPT4YGR063C TLG1Q03322 224 aa4.06□□□□□ -1.76
SPT4YGR063C SFI1Q12369 946 aa4.06□□□□□ -1.76
SPT4YGR063C MCM2P29469 868 aa4.05□□□□□ -1.76
SPT4YGR063C NDC80P40460 691 aa4.05□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms