RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	NFI1	Q12216	726 aa		3.75	□□□□□ -1.81
CAF20	YOR276W	RPN5	Q12250	445 aa	Known RBP	3.75	□□□□□ -1.81
CAF20	YOR276W	FRE6	Q12473	712 aa		3.75	□□□□□ -1.81
CAF20	YOR276W	RAV1	P47104	1357 aa		3.75	□□□□□ -1.81
CAF20	YOR276W	HIP1	P06775	603 aa		3.74	□□□□□ -1.81
CAF20	YOR276W	PEP4	P07267	405 aa	Known RBP	3.74	□□□□□ -1.81
CAF20	YOR276W	PRP2	P20095	876 aa	Predicted RBP	3.74	□□□□□ -1.81
CAF20	YOR276W	SUI2	P20459	304 aa	Known RBP	3.74	□□□□□ -1.81
CAF20	YOR276W	URE2	P23202	354 aa	Known RBP	3.74	□□□□□ -1.81
CAF20	YOR276W	RAD14	P28519	371 aa		3.74	□□□□□ -1.81
CAF20	YOR276W	PUP2	P32379	260 aa		3.74	□□□□□ -1.81
CAF20	YOR276W	NTC20	P38302	140 aa	Predicted RBP	3.74	□□□□□ -1.81
CAF20	YOR276W	UBA4	P38820	440 aa		3.74	□□□□□ -1.81
CAF20	YOR276W	VPS41	P38959	992 aa		3.74	□□□□□ -1.81
CAF20	YOR276W	GAT1	P43574	510 aa		3.74	□□□□□ -1.81
CAF20	YOR276W	ATG27	P46989	271 aa		3.74	□□□□□ -1.81
CAF20	YOR276W	UBP8	P50102	471 aa		3.74	□□□□□ -1.81
CAF20	YOR276W	YGL108C	P53139	140 aa		3.74	□□□□□ -1.81
CAF20	YOR276W	YNL144C	P53907	740 aa		3.74	□□□□□ -1.81
CAF20	YOR276W	RRP45	Q05636	305 aa	Known RBP	3.74	□□□□□ -1.81
CAF20	YOR276W	MMR1	Q06324	491 aa		3.74	□□□□□ -1.81
CAF20	YOR276W	THP1	Q08231	455 aa		3.74	□□□□□ -1.81
CAF20	YOR276W	DCI1	Q08558	271 aa		3.74	□□□□□ -1.81
CAF20	YOR276W	NCE102	Q12207	173 aa	RIP-Chip data	3.74	□□□□□ -1.81	not detected
CAF20	YOR276W	GAL4	P04386	881 aa		3.73	□□□□□ -1.81
CAF20	YOR276W	CBP1	P07252	654 aa		3.73	□□□□□ -1.81
CAF20	YOR276W	SPS4	P09937	338 aa		3.73	□□□□□ -1.81
CAF20	YOR276W	SRV2	P17555	526 aa	Known RBP	3.73	□□□□□ -1.81
CAF20	YOR276W	URA4	P20051	364 aa		3.73	□□□□□ -1.81
CAF20	YOR276W	RPB8	P20436	146 aa		3.73	□□□□□ -1.81
CAF20	YOR276W	PTP1	P25044	335 aa		3.73	□□□□□ -1.81
CAF20	YOR276W	KEL1	P38853	1164 aa	Known RBP	3.73	□□□□□ -1.81
CAF20	YOR276W	ULP2	P40537	1034 aa	Predicted RBP	3.73	□□□□□ -1.81
CAF20	YOR276W	HXT9	P40885	567 aa		3.73	□□□□□ -1.81
CAF20	YOR276W	ALK1	P43633	760 aa	Known RBP	3.73	□□□□□ -1.81
CAF20	YOR276W	PKP2	P53170	491 aa		3.73	□□□□□ -1.81
CAF20	YOR276W	BUD32	P53323	261 aa		3.73	□□□□□ -1.81
CAF20	YOR276W	SMM1	P53720	384 aa	Known RBP	3.73	□□□□□ -1.81
CAF20	YOR276W	EAF7	P53911	425 aa	Known RBP	3.73	□□□□□ -1.81
CAF20	YOR276W	KTR5	P53966	522 aa	Predicted RBP	3.73	□□□□□ -1.81
CAF20	YOR276W	YPL107W	Q02873	248 aa		3.73	□□□□□ -1.81
CAF20	YOR276W	SWF1	Q04629	336 aa		3.73	□□□□□ -1.81
CAF20	YOR276W	YDL218W	Q07629	317 aa		3.73	□□□□□ -1.81
CAF20	YOR276W	CUE5	Q08412	411 aa	Known RBP	3.73	□□□□□ -1.81
CAF20	YOR276W	CFT2	Q12102	859 aa	Predicted RBP	3.73	□□□□□ -1.81
CAF20	YOR276W	FRE7	Q12333	620 aa		3.73	□□□□□ -1.81
CAF20	YOR276W	LPD1	P09624	499 aa	Known RBP	3.72	□□□□□ -1.81
CAF20	YOR276W	YMR085W	P0CF18	432 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	COQ3	P27680	312 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	NIP100	P33420	868 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	LTV1	P34078	463 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	SHP1	P34223	423 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	YKL023W	P36103	277 aa	Known RBP	3.72	□□□□□ -1.81
CAF20	YOR276W	HEL1	P36113	551 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	ARA1	P38115	344 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	SER3	P40054	469 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	VRG4	P40107	337 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	URB2	P47108	1174 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	COS5	P47187	383 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	FMS1	P50264	508 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	DRN1	P53255	507 aa	Known RBP	3.72	□□□□□ -1.81
CAF20	YOR276W	HEF3	P53978	1044 aa	Known RBP	3.72	□□□□□ -1.81
CAF20	YOR276W	SKO1	Q02100	647 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	HOT1	Q03213	719 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	ACL4	Q03771	387 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	PRP42	Q03776	544 aa	Known RBP	3.72	□□□□□ -1.81
CAF20	YOR276W	COS7	Q07788	383 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	RDR1	Q08904	546 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.72	□□□□□ -1.81	not detected
CAF20	YOR276W	RRI1	Q12468	440 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	EDE1	P34216	1381 aa		3.72	□□□□□ -1.81
CAF20	YOR276W	RAD52	P06778	471 aa	Known RBP	3.71	□□□□□ -1.82
CAF20	YOR276W	CNA1	P23287	553 aa		3.71	□□□□□ -1.82
CAF20	YOR276W	KRR1	P25586	316 aa	Predicted RBP	3.71	□□□□□ -1.82
CAF20	YOR276W	RPN2	P32565	945 aa	Known RBP	3.71	□□□□□ -1.82
CAF20	YOR276W	BNA4	P38169	460 aa		3.71	□□□□□ -1.82
CAF20	YOR276W	TCM62	P38228	572 aa	Known RBP	3.71	□□□□□ -1.82
CAF20	YOR276W	YHR210C	P38893	341 aa		3.71	□□□□□ -1.82
CAF20	YOR276W	TIF4631	P39935	952 aa	Known RBP	3.71	□□□□□ -1.82
CAF20	YOR276W	XBP1	P40489	647 aa		3.71	□□□□□ -1.82
CAF20	YOR276W	OCA1	P50946	238 aa	Predicted RBP	3.71	□□□□□ -1.82
CAF20	YOR276W	ZPR1	P53303	486 aa	Known RBP	3.71	□□□□□ -1.82
CAF20	YOR276W	EOS1	P53938	366 aa		3.71	□□□□□ -1.82
CAF20	YOR276W	SLG1	P54867	378 aa		3.71	□□□□□ -1.82
CAF20	YOR276W	SHR3	Q02774	210 aa		3.71	□□□□□ -1.82
CAF20	YOR276W	YMR130W	Q04223	302 aa		3.71	□□□□□ -1.82
CAF20	YOR276W	ARP10	Q04549	284 aa		3.71	□□□□□ -1.82
CAF20	YOR276W	MCP2	Q06567	569 aa		3.71	□□□□□ -1.82
CAF20	YOR276W	UAF30	Q08747	228 aa		3.71	□□□□□ -1.82
CAF20	YOR276W	VAM3	Q12241	283 aa		3.71	□□□□□ -1.82
CAF20	YOR276W	RPL1A	P0CX43	217 aa	Known RBP	3.7	□□□□□ -1.82
CAF20	YOR276W	RPL1B	P0CX44	217 aa	Known RBP	3.7	□□□□□ -1.82
CAF20	YOR276W	CLN1	P20437	546 aa		3.7	□□□□□ -1.82
CAF20	YOR276W	SGV1	P23293	657 aa	Known RBP	3.7	□□□□□ -1.82
CAF20	YOR276W	BRF1	P29056	596 aa		3.7	□□□□□ -1.82
CAF20	YOR276W	MSN2	P33748	704 aa		3.7	□□□□□ -1.82
CAF20	YOR276W	LAS1	P36146	502 aa	Predicted RBP	3.7	□□□□□ -1.82
CAF20	YOR276W	POP2	P39008	433 aa		3.7	□□□□□ -1.82
CAF20	YOR276W	SOL4	P53315	255 aa		3.7	□□□□□ -1.82
CAF20	YOR276W	YPL014W	Q02606	381 aa		3.7	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms