RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCL1	YOL010W	INN1	P53901	409 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	MOT3	P54785	490 aa	Known RBP	4.61	□□□□□ -1.67
RCL1	YOL010W	UME1	Q03010	460 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	GGA1	Q06336	557 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	TGL5	Q12043	749 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	SMF3	Q12078	473 aa	Predicted RBP	4.61	□□□□□ -1.67
RCL1	YOL010W	YOR342C	Q12182	319 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	WHI5	Q12416	295 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	SEY1	Q99287	776 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	CPA1	P07258	411 aa	Known RBP	4.6	□□□□□ -1.67
RCL1	YOL010W	HOM3	P10869	527 aa		4.6	□□□□□ -1.67
RCL1	YOL010W	APA1	P16550	321 aa	Known RBP	4.6	□□□□□ -1.67
RCL1	YOL010W	PHO84	P25297	587 aa	Known RBP	4.6	□□□□□ -1.67
RCL1	YOL010W	KAR4	P25583	335 aa		4.6	□□□□□ -1.67
RCL1	YOL010W	YCR102C	P25608	368 aa		4.6	□□□□□ -1.67
RCL1	YOL010W	MRS6	P32864	603 aa	Known RBP	4.6	□□□□□ -1.67
RCL1	YOL010W	SOL2	P37262	315 aa		4.6	□□□□□ -1.67
RCL1	YOL010W	DSS1	P39112	969 aa		4.6	□□□□□ -1.67
RCL1	YOL010W	MNN11	P46985	422 aa	Known RBP	4.6	□□□□□ -1.67
RCL1	YOL010W	NNF1	P47149	201 aa		4.6	□□□□□ -1.67
RCL1	YOL010W	RNH70	P53331	553 aa		4.6	□□□□□ -1.67
RCL1	YOL010W	FRE4	P53746	719 aa		4.6	□□□□□ -1.67
RCL1	YOL010W	VPS75	P53853	264 aa		4.6	□□□□□ -1.67
RCL1	YOL010W	EAF7	P53911	425 aa	Known RBP	4.6	□□□□□ -1.67
RCL1	YOL010W	PRP3	Q03338	469 aa	Predicted RBP	4.6	□□□□□ -1.67
RCL1	YOL010W	YLR049C	Q12110	428 aa		4.6	□□□□□ -1.67
RCL1	YOL010W	ATG9	Q12142	997 aa		4.6	□□□□□ -1.67
RCL1	YOL010W	ACF2	Q12168	779 aa		4.6	□□□□□ -1.67
RCL1	YOL010W	GPM3	Q12326	303 aa		4.6	□□□□□ -1.67
RCL1	YOL010W	CDC26	P14724	124 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	YSR3	P23501	404 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	DCC1	P25559	380 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	NFU1	P32860	256 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	MTH1	P35198	433 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	BYE1	P36106	594 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	FMP46	P36141	133 aa	Known RBP	4.59	□□□□□ -1.67
RCL1	YOL010W	PCL5	P38794	229 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	DHH1	P39517	506 aa	Known RBP	4.59	□□□□□ -1.67
RCL1	YOL010W	SPC72	P39723	622 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	YEL073C	P39974	107 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	TMN3	P40071	706 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	IST3	P40565	148 aa	Predicted RBP	4.59	□□□□□ -1.67
RCL1	YOL010W	RRT5	P43607	289 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	BNA3	P47039	444 aa	Known RBP	4.59	□□□□□ -1.67
RCL1	YOL010W	KEL2	P50090	882 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	COG1	P53079	417 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	TIM44	Q01852	431 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	RCO1	Q04779	684 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	YDR222W	Q04925	415 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	RRP15	Q06511	250 aa	Predicted RBP	4.59	□□□□□ -1.67
RCL1	YOL010W	NKP1	Q12493	238 aa		4.59	□□□□□ -1.67
RCL1	YOL010W	MDM35	O60200	86 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	PHO13	P19881	312 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	CLN1	P20437	546 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	ERG4	P25340	473 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	MSH1	P25846	959 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	AEP1	P32493	518 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	ORC2	P32833	620 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	SRP101	P32916	621 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	PHO11	P35842	467 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	MRPL10	P36520	322 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	TRM7	P38238	310 aa	Known RBP	4.58	□□□□□ -1.68
RCL1	YOL010W	PHO12	P38693	467 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	DBP8	P38719	431 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	LSM5	P40089	93 aa	Known RBP	4.58	□□□□□ -1.68
RCL1	YOL010W	GID8	P40208	455 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	MEP1	P40260	492 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	ATM1	P40416	690 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	TES1	P41903	349 aa	Known RBP	4.58	□□□□□ -1.68
RCL1	YOL010W	ROK1	P45818	564 aa	Predicted RBP	4.58	□□□□□ -1.68
RCL1	YOL010W	BUD13	P46947	266 aa	Predicted RBP	4.58	□□□□□ -1.68
RCL1	YOL010W	GPI8	P49018	411 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	TAD1	P53065	400 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	YGR021W	P53212	290 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	GND2	P53319	492 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	NGL3	Q03210	505 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	NUP53	Q03790	475 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	ATG16	Q03818	150 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	LDB18	Q07887	179 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	TEN1	Q07921	160 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	AKR2	Q12013	749 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	HER1	Q12276	1246 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	EFG1	Q3E705	233 aa	Known RBP	4.58	□□□□□ -1.68
RCL1	YOL010W	LAG2	Q92325	660 aa		4.58	□□□□□ -1.68
RCL1	YOL010W	COX1	P00401	534 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	SPO12	P17123	173 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	VPS34	P22543	875 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	MCM2	P29469	868 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	DEP1	P31385	405 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	DBF4	P32325	704 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	LHS1	P36016	881 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	BIT2	P38346	545 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	RTT107	P38850	1070 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	BEM4	P39011	633 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	MBP1	P39678	833 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	SAP1	P39955	897 aa	Known RBP	4.57	□□□□□ -1.68
RCL1	YOL010W	IRR1	P40541	1150 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	STR3	P53101	465 aa	Known RBP	4.57	□□□□□ -1.68
RCL1	YOL010W	SSL2	Q00578	843 aa		4.57	□□□□□ -1.68
RCL1	YOL010W	ECM9	Q02202	377 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms