RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W PHA2P32452 334 aa5.54□□□□□ -1.52
SHM1YBR263W PTM1P32857 523 aa5.54□□□□□ -1.52
SHM1YBR263W TIP20P33891 701 aa5.54□□□□□ -1.52
SHM1YBR263W PHO89P38361 574 aa5.54□□□□□ -1.52
SHM1YBR263W RRP3P38712 501 aaKnown RBP5.54□□□□□ -1.52
SHM1YBR263W EFM1P38732 585 aa5.54□□□□□ -1.52
SHM1YBR263W LIN1P38852 340 aaPredicted RBP5.54□□□□□ -1.52
SHM1YBR263W NAB3P38996 802 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
SHM1YBR263W MPT5P39016 859 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
SHM1YBR263W CCT6P39079 546 aa5.54□□□□□ -1.52
SHM1YBR263W MGS1P40151 587 aa5.54□□□□□ -1.52
SHM1YBR263W PAN2P53010 1115 aaPredicted RBP5.54□□□□□ -1.52
SHM1YBR263W YNL058CP53947 316 aa5.54□□□□□ -1.52
SHM1YBR263W UBX4P54730 416 aa5.54□□□□□ -1.52
SHM1YBR263W TGL2P54857 326 aa5.54□□□□□ -1.52
SHM1YBR263W GOT1Q03554 138 aa5.54□□□□□ -1.52
SHM1YBR263W YMR155WQ03795 547 aa5.54□□□□□ -1.52
SHM1YBR263W ARX1Q03862 593 aaKnown RBP5.54□□□□□ -1.52
SHM1YBR263W SPO20Q04359 397 aa5.54□□□□□ -1.52
SHM1YBR263W SSL1Q04673 461 aaPredicted RBP5.54□□□□□ -1.52
SHM1YBR263W SRO7Q12038 1033 aa5.54□□□□□ -1.52
SHM1YBR263W GTT2Q12390 233 aa5.54□□□□□ -1.52
SHM1YBR263W YPL247CQ12523 523 aa5.54□□□□□ -1.52
SHM1YBR263W YPR089WO13585 888 aa5.53□□□□□ -1.52
SHM1YBR263W SEM1O94742 89 aa5.53□□□□□ -1.52
SHM1YBR263W COX3P00420 269 aa5.53□□□□□ -1.52
SHM1YBR263W TFB1P32776 642 aa5.53□□□□□ -1.52
SHM1YBR263W YSC84P32793 468 aa5.53□□□□□ -1.52
SHM1YBR263W ASK1P35734 292 aa5.53□□□□□ -1.52
SHM1YBR263W RIM2P38127 377 aa5.53□□□□□ -1.52
SHM1YBR263W YHR020WP38708 688 aaKnown RBP5.53□□□□□ -1.52
SHM1YBR263W HSE1P38753 452 aa5.53□□□□□ -1.52
SHM1YBR263W DSN1P40568 576 aa5.53□□□□□ -1.52
SHM1YBR263W YFR018CP43599 363 aa5.53□□□□□ -1.52
SHM1YBR263W CCE1Q03702 353 aa5.53□□□□□ -1.52
SHM1YBR263W HPT1Q04178 221 aaKnown RBP5.53□□□□□ -1.52
SHM1YBR263W RCO1Q04779 684 aa5.53□□□□□ -1.52
SHM1YBR263W RSC3Q06639 885 aa5.53□□□□□ -1.52
SHM1YBR263W OMS1Q06668 471 aa5.53□□□□□ -1.52
SHM1YBR263W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
SHM1YBR263W RTT10Q08924 1013 aa5.53□□□□□ -1.52
SHM1YBR263W APC9Q12107 265 aa5.53□□□□□ -1.52
SHM1YBR263W MDY2Q12285 212 aa5.53□□□□□ -1.52
SHM1YBR263W FUM1P08417 488 aaKnown RBP5.52□□□□□ -1.53
SHM1YBR263W YAR066WP0CX18 203 aa5.52□□□□□ -1.53
SHM1YBR263W YHR214WP0CX19 203 aa5.52□□□□□ -1.53
SHM1YBR263W TOD6P34219 525 aa5.52□□□□□ -1.53
SHM1YBR263W YEL073CP39974 107 aa5.52□□□□□ -1.53
SHM1YBR263W LSM5P40089 93 aaKnown RBP5.52□□□□□ -1.53
SHM1YBR263W YIL108WP40483 696 aaKnown RBP5.52□□□□□ -1.53
SHM1YBR263W GCD14P46959 383 aaPredicted RBP5.52□□□□□ -1.53
SHM1YBR263W NNF1P47149 201 aa5.52□□□□□ -1.53
SHM1YBR263W TIS11P47977 285 aa5.52□□□□□ -1.53
SHM1YBR263W CLD1P53264 445 aa5.52□□□□□ -1.53
SHM1YBR263W RCF2P53721 224 aa5.52□□□□□ -1.53
SHM1YBR263W IST1P53843 298 aaPredicted RBP5.52□□□□□ -1.53
SHM1YBR263W SWS2P53937 143 aa5.52□□□□□ -1.53
SHM1YBR263W TAF12Q03761 539 aa5.52□□□□□ -1.53
SHM1YBR263W YFT2Q06676 274 aa5.52□□□□□ -1.53
SHM1YBR263W SPE4Q12455 300 aa5.52□□□□□ -1.53
SHM1YBR263W YMR085WP0CF18 432 aa5.51□□□□□ -1.53
SHM1YBR263W MSH1P25846 959 aa5.51□□□□□ -1.53
SHM1YBR263W SPR1P32603 445 aa5.51□□□□□ -1.53
SHM1YBR263W YHR045WP38775 560 aa5.51□□□□□ -1.53
SHM1YBR263W YDR089WP38966 869 aa5.51□□□□□ -1.53
SHM1YBR263W CIN4P39110 191 aa5.51□□□□□ -1.53
SHM1YBR263W AXL1P40851 1208 aa5.51□□□□□ -1.53
SHM1YBR263W FAR3P46671 204 aa5.51□□□□□ -1.53
SHM1YBR263W BIR1P47134 954 aa5.51□□□□□ -1.53
SHM1YBR263W AIF1P52923 378 aa5.51□□□□□ -1.53
SHM1YBR263W ZRG17P53735 605 aa5.51□□□□□ -1.53
SHM1YBR263W ECM9Q02202 377 aa5.51□□□□□ -1.53
SHM1YBR263W TRM82Q03774 444 aa5.51□□□□□ -1.53
SHM1YBR263W PLB3Q08108 686 aa5.51□□□□□ -1.53
SHM1YBR263W RPS13P05756 151 aaKnown RBP5.51□□□□□ -1.53
SHM1YBR263W RPB4P20433 221 aaPredicted RBP5.51□□□□□ -1.53
SHM1YBR263W YCR090CP25654 182 aaKnown RBP5.51□□□□□ -1.53
SHM1YBR263W ATP11P32453 318 aa5.51□□□□□ -1.53
SHM1YBR263W SKT5P34226 696 aa5.51□□□□□ -1.53
SHM1YBR263W NUP120P35729 1037 aa5.51□□□□□ -1.53
SHM1YBR263W YPT52P36018 234 aaKnown RBP5.51□□□□□ -1.53
SHM1YBR263W RRN3P36070 627 aa5.51□□□□□ -1.53
SHM1YBR263W UTH1P36135 365 aa5.51□□□□□ -1.53
SHM1YBR263W RPF2P36160 344 aaKnown RBP5.51□□□□□ -1.53
SHM1YBR263W UBA4P38820 440 aa5.51□□□□□ -1.53
SHM1YBR263W MEP1P40260 492 aa5.51□□□□□ -1.53
SHM1YBR263W UTP18P40362 594 aaPredicted RBP5.51□□□□□ -1.53
SHM1YBR263W TDA10P42938 290 aa5.51□□□□□ -1.53
SHM1YBR263W STB2P46679 850 aa5.51□□□□□ -1.53
SHM1YBR263W MAD3P47074 515 aa5.51□□□□□ -1.53
SHM1YBR263W RMI1Q02685 241 aa5.51□□□□□ -1.53
SHM1YBR263W NHP10Q03435 203 aa5.51□□□□□ -1.53
SHM1YBR263W GRS2Q06817 618 aa5.51□□□□□ -1.53
SHM1YBR263W VAM6Q07468 1049 aa5.51□□□□□ -1.53
SHM1YBR263W ENT4Q07872 247 aa5.51□□□□□ -1.53
SHM1YBR263W TMA46Q12000 345 aaKnown RBP5.51□□□□□ -1.53
SHM1YBR263W PST1Q12355 444 aa5.51□□□□□ -1.53
SHM1YBR263W SEN1Q00416 2231 aaKnown RBP5.5□□□□□ -1.53
SHM1YBR263W CDC21P06785 304 aa5.5□□□□□ -1.53
SHM1YBR263W MET8P15807 274 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms