RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W SPF1P39986 1215 aaKnown RBP5.01□□□□□ -1.61
PRE7YBL041W CPR6P53691 371 aaKnown RBP5.01□□□□□ -1.61
PRE7YBL041W FRE4P53746 719 aa5.01□□□□□ -1.61
PRE7YBL041W NOP15P53927 220 aaPredicted RBP5.01□□□□□ -1.61
PRE7YBL041W YKR011CQ02209 353 aa5.01□□□□□ -1.61
PRE7YBL041W YMR160WQ03823 816 aa5.01□□□□□ -1.61
PRE7YBL041W SML1Q04964 104 aa5.01□□□□□ -1.61
PRE7YBL041W ECI1Q05871 280 aa5.01□□□□□ -1.61
PRE7YBL041W PLB3Q08108 686 aa5.01□□□□□ -1.61
PRE7YBL041W IMA2Q08295 589 aa5.01□□□□□ -1.61
PRE7YBL041W FRE5Q08908 694 aa5.01□□□□□ -1.61
PRE7YBL041W TRM8Q12009 286 aa5.01□□□□□ -1.61
PRE7YBL041W SMF3Q12078 473 aaPredicted RBP5.01□□□□□ -1.61
PRE7YBL041W LDB17Q12342 491 aa5.01□□□□□ -1.61
PRE7YBL041W GCN1P33892 2672 aaKnown RBP5.01□□□□□ -1.61
PRE7YBL041W MEC1P38111 2368 aa5.01□□□□□ -1.61
PRE7YBL041W CSF1Q12150 2958 aa5□□□□□ -1.61
PRE7YBL041W CPA1P07258 411 aaKnown RBP5□□□□□ -1.61
PRE7YBL041W ABF1P14164 731 aa5□□□□□ -1.61
PRE7YBL041W PPH21P23594 369 aa5□□□□□ -1.61
PRE7YBL041W PAP1P29468 568 aaKnown RBP5□□□□□ -1.61
PRE7YBL041W CNS1P33313 385 aa5□□□□□ -1.61
PRE7YBL041W MFT1P33441 392 aaKnown RBP5□□□□□ -1.61
PRE7YBL041W WBP1P33767 430 aaKnown RBP5□□□□□ -1.61
PRE7YBL041W TFC3P34111 1160 aa5□□□□□ -1.61
PRE7YBL041W PEX5P35056 612 aa5□□□□□ -1.61
PRE7YBL041W GMH1P36125 273 aa5□□□□□ -1.61
PRE7YBL041W MAK5P38112 773 aaPredicted RBP5□□□□□ -1.61
PRE7YBL041W POP4P38336 279 aa5□□□□□ -1.61
PRE7YBL041W PCL5P38794 229 aa5□□□□□ -1.61
PRE7YBL041W YAL037WP39728 267 aa5□□□□□ -1.61
PRE7YBL041W IME4P41833 600 aa5□□□□□ -1.61
PRE7YBL041W PXA1P41909 870 aa5□□□□□ -1.61
PRE7YBL041W CTK3P46963 296 aaPredicted RBP5□□□□□ -1.61
PRE7YBL041W JSN1P47135 1091 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
PRE7YBL041W RTA1P53047 317 aa5□□□□□ -1.61
PRE7YBL041W RPL22BP56628 122 aaKnown RBP5□□□□□ -1.61
PRE7YBL041W PET117Q02771 107 aa5□□□□□ -1.61
PRE7YBL041W TRS31Q03337 283 aa5□□□□□ -1.61
PRE7YBL041W EMI1Q04406 187 aa5□□□□□ -1.61
PRE7YBL041W BLS1Q06071 122 aa5□□□□□ -1.61
PRE7YBL041W YDR061WQ12298 539 aa5□□□□□ -1.61
PRE7YBL041W SEM1O94742 89 aa4.99□□□□□ -1.61
PRE7YBL041W YML002WP0CF17 737 aa4.99□□□□□ -1.61
PRE7YBL041W PET123P17558 318 aa4.99□□□□□ -1.61
PRE7YBL041W GID7P25569 745 aa4.99□□□□□ -1.61
PRE7YBL041W CWP1P28319 239 aa4.99□□□□□ -1.61
PRE7YBL041W PRP18P33411 251 aaPredicted RBP4.99□□□□□ -1.61
PRE7YBL041W STB6P36085 766 aa4.99□□□□□ -1.61
PRE7YBL041W MRPL37P36532 105 aa4.99□□□□□ -1.61
PRE7YBL041W MRP21P38175 177 aa4.99□□□□□ -1.61
PRE7YBL041W YSW1P38280 609 aa4.99□□□□□ -1.61
PRE7YBL041W VHC1P38329 1120 aa4.99□□□□□ -1.61
PRE7YBL041W SEO1P39709 593 aa4.99□□□□□ -1.61
PRE7YBL041W IRR1P40541 1150 aa4.99□□□□□ -1.61
PRE7YBL041W CEP3P40969 608 aa4.99□□□□□ -1.61
PRE7YBL041W TAH11P47112 604 aa4.99□□□□□ -1.61
PRE7YBL041W UTP6Q02354 440 aaKnown RBP4.99□□□□□ -1.61
PRE7YBL041W EGD1Q02642 157 aaKnown RBP4.99□□□□□ -1.61
PRE7YBL041W LGE1Q02796 332 aaKnown RBP4.99□□□□□ -1.61
PRE7YBL041W ARX1Q03862 593 aaKnown RBP4.99□□□□□ -1.61
PRE7YBL041W NHX1Q04121 633 aa4.99□□□□□ -1.61
PRE7YBL041W YIL046W-AQ3E7Z4 54 aa4.99□□□□□ -1.61
PRE7YBL041W RED1P14291 827 aa4.98□□□□□ -1.61
PRE7YBL041W HSP60P19882 572 aaKnown RBP4.98□□□□□ -1.61
PRE7YBL041W DAL82P21705 255 aa4.98□□□□□ -1.61
PRE7YBL041W RFA1P22336 621 aaKnown RBP4.98□□□□□ -1.61
PRE7YBL041W YSR3P23501 404 aa4.98□□□□□ -1.61
PRE7YBL041W MSH1P25846 959 aa4.98□□□□□ -1.61
PRE7YBL041W MRPL9P31334 269 aa4.98□□□□□ -1.61
PRE7YBL041W SPC42P36094 363 aa4.98□□□□□ -1.61
PRE7YBL041W PIM1P36775 1133 aa4.98□□□□□ -1.61
PRE7YBL041W PBP2P38151 413 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
PRE7YBL041W SMF1P38925 575 aa4.98□□□□□ -1.61
PRE7YBL041W ALG8P40351 577 aa4.98□□□□□ -1.61
PRE7YBL041W YJL107CP42947 387 aa4.98□□□□□ -1.61
PRE7YBL041W HXT16P47185 567 aa4.98□□□□□ -1.61
PRE7YBL041W PEX8P53248 589 aa4.98□□□□□ -1.61
PRE7YBL041W ZRG17P53735 605 aa4.98□□□□□ -1.61
PRE7YBL041W TIM44Q01852 431 aa4.98□□□□□ -1.61
PRE7YBL041W RPN9Q04062 393 aaKnown RBP4.98□□□□□ -1.61
PRE7YBL041W URH1Q04179 340 aa4.98□□□□□ -1.61
PRE7YBL041W YDR109CQ04585 715 aa4.98□□□□□ -1.61
PRE7YBL041W RCO1Q04779 684 aa4.98□□□□□ -1.61
PRE7YBL041W VTA1Q06263 330 aa4.98□□□□□ -1.61
PRE7YBL041W TDA5Q06417 326 aaKnown RBP4.98□□□□□ -1.61
PRE7YBL041W SLD7Q08457 257 aa4.98□□□□□ -1.61
PRE7YBL041W GTT2Q12390 233 aa4.98□□□□□ -1.61
PRE7YBL041W SKM1Q12469 655 aa4.98□□□□□ -1.61
PRE7YBL041W RMD5Q12508 421 aa4.98□□□□□ -1.61
PRE7YBL041W STT4P37297 1900 aa4.97□□□□□ -1.61
PRE7YBL041W RIP1P08067 215 aa4.97□□□□□ -1.61
PRE7YBL041W STE4P18851 423 aa4.97□□□□□ -1.61
PRE7YBL041W YCL068CP25593 260 aa4.97□□□□□ -1.61
PRE7YBL041W MGT1P26188 188 aa4.97□□□□□ -1.61
PRE7YBL041W GCG1P32656 232 aaKnown RBP4.97□□□□□ -1.61
PRE7YBL041W YBR184WP38299 523 aa4.97□□□□□ -1.61
PRE7YBL041W DED81P38707 554 aaKnown RBP4.97□□□□□ -1.61
PRE7YBL041W YEL073CP39974 107 aa4.97□□□□□ -1.61
PRE7YBL041W NDC80P40460 691 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms