RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C ARG1P22768 420 aa7.8□□□□□ -1.16
LSP1YPL004C CRM1P30822 1084 aaKnown RBP7.8□□□□□ -1.16
LSP1YPL004C SPT16P32558 1035 aaKnown RBP7.8□□□□□ -1.16
LSP1YPL004C NUP120P35729 1037 aa7.8□□□□□ -1.16
LSP1YPL004C NTR2P36118 322 aaPredicted RBP7.8□□□□□ -1.16
LSP1YPL004C OCA5P38738 679 aa7.8□□□□□ -1.16
LSP1YPL004C COA1P40452 197 aa7.8□□□□□ -1.16
LSP1YPL004C FAR3P46671 204 aa7.8□□□□□ -1.16
LSP1YPL004C GCV1P48015 400 aa7.8□□□□□ -1.16
LSP1YPL004C AIF1P52923 378 aa7.8□□□□□ -1.16
LSP1YPL004C TEL2P53038 688 aa7.8□□□□□ -1.16
LSP1YPL004C COS12P53053 380 aa7.8□□□□□ -1.16
LSP1YPL004C EFM5P53200 248 aaKnown RBP7.8□□□□□ -1.16
LSP1YPL004C IBD2P53892 351 aa7.8□□□□□ -1.16
LSP1YPL004C NAM8Q00539 523 aaKnown RBP7.8□□□□□ -1.16
LSP1YPL004C SEC10Q06245 871 aa7.8□□□□□ -1.16
LSP1YPL004C YOL019WQ08157 551 aa7.8□□□□□ -1.16
LSP1YPL004C APC9Q12107 265 aa7.8□□□□□ -1.16
LSP1YPL004C RRP42Q12277 265 aaPredicted RBP7.8□□□□□ -1.16
LSP1YPL004C AHA1Q12449 350 aaKnown RBP7.8□□□□□ -1.16
LSP1YPL004C GAL4P04386 881 aa7.79□□□□□ -1.16
LSP1YPL004C CWP1P28319 239 aa7.79□□□□□ -1.16
LSP1YPL004C PET309P32522 965 aaPredicted RBP7.79□□□□□ -1.16
LSP1YPL004C DOM34P33309 386 aa7.79□□□□□ -1.16
LSP1YPL004C RIM11P38615 370 aa7.79□□□□□ -1.16
LSP1YPL004C UME6P39001 836 aa7.79□□□□□ -1.16
LSP1YPL004C MGS1P40151 587 aa7.79□□□□□ -1.16
LSP1YPL004C LRO1P40345 661 aa7.79□□□□□ -1.16
LSP1YPL004C DUG1P43616 481 aaKnown RBP7.79□□□□□ -1.16
LSP1YPL004C YJR030CP47101 745 aa7.79□□□□□ -1.16
LSP1YPL004C YOR238WQ08634 303 aa7.79□□□□□ -1.16
LSP1YPL004C GPR1Q12361 961 aa7.79□□□□□ -1.16
LSP1YPL004C SKM1Q12469 655 aa7.79□□□□□ -1.16
LSP1YPL004C AI3P03877 415 aa7.78□□□□□ -1.16
LSP1YPL004C RHO2P06781 192 aa7.78□□□□□ -1.16
LSP1YPL004C HSC82P15108 705 aaKnown RBP7.78□□□□□ -1.16
LSP1YPL004C GUK1P15454 187 aaKnown RBP7.78□□□□□ -1.16
LSP1YPL004C VAC17P25591 423 aa7.78□□□□□ -1.16
LSP1YPL004C YSC84P32793 468 aa7.78□□□□□ -1.16
LSP1YPL004C SDH3P33421 198 aa7.78□□□□□ -1.16
LSP1YPL004C INM1P38710 295 aa7.78□□□□□ -1.16
LSP1YPL004C AXL2P38928 823 aa7.78□□□□□ -1.16
LSP1YPL004C LYS1P38998 373 aaRIP-Chip data7.78□□□□□ -1.16not detected
LSP1YPL004C NDE1P40215 560 aa7.78□□□□□ -1.16
LSP1YPL004C PRM2P40534 656 aa7.78□□□□□ -1.16
LSP1YPL004C SGF73P53165 657 aa7.78□□□□□ -1.16
LSP1YPL004C SLM2P53955 656 aa7.78□□□□□ -1.16
LSP1YPL004C UBX4P54730 416 aa7.78□□□□□ -1.16
LSP1YPL004C GAS3Q03655 524 aa7.78□□□□□ -1.16
LSP1YPL004C STP3Q05937 343 aa7.78□□□□□ -1.16
LSP1YPL004C RIF2Q06208 395 aa7.78□□□□□ -1.16
LSP1YPL004C HDA3Q06623 655 aa7.78□□□□□ -1.16
LSP1YPL004C RAD34Q06665 692 aa7.78□□□□□ -1.16
LSP1YPL004C ENT4Q07872 247 aa7.78□□□□□ -1.16
LSP1YPL004C TMA46Q12000 345 aaKnown RBP7.78□□□□□ -1.16
LSP1YPL004C DIN7Q12086 430 aa7.78□□□□□ -1.16
LSP1YPL004C ATG29Q12092 213 aa7.78□□□□□ -1.16
LSP1YPL004C YDR262WQ12331 272 aa7.78□□□□□ -1.16
LSP1YPL004C BRR1Q99177 341 aaPredicted RBP7.78□□□□□ -1.16
LSP1YPL004C LAT1P12695 482 aaKnown RBP7.77□□□□□ -1.17
LSP1YPL004C FUR1P18562 216 aaKnown RBP7.77□□□□□ -1.17
LSP1YPL004C SEC15P22224 910 aa7.77□□□□□ -1.17
LSP1YPL004C HEM3P28789 327 aa7.77□□□□□ -1.17
LSP1YPL004C MEI5P32489 222 aa7.77□□□□□ -1.17
LSP1YPL004C SKN1P33336 771 aa7.77□□□□□ -1.17
LSP1YPL004C STS1P38637 319 aa7.77□□□□□ -1.17
LSP1YPL004C YDR089WP38966 869 aa7.77□□□□□ -1.17
LSP1YPL004C GGC1P38988 300 aa7.77□□□□□ -1.17
LSP1YPL004C YRB1P41920 201 aaKnown RBP7.77□□□□□ -1.17
LSP1YPL004C MAD3P47074 515 aa7.77□□□□□ -1.17
LSP1YPL004C LSM3P57743 89 aaKnown RBP7.77□□□□□ -1.17
LSP1YPL004C OMS1Q06668 471 aa7.77□□□□□ -1.17
LSP1YPL004C YDR056CQ12025 205 aa7.77□□□□□ -1.17
LSP1YPL004C YDR061WQ12298 539 aa7.77□□□□□ -1.17
LSP1YPL004C RRP12Q12754 1228 aaKnown RBP7.77□□□□□ -1.17
LSP1YPL004C NMT1P14743 455 aa7.76□□□□□ -1.17
LSP1YPL004C RPS1AP33442 255 aaKnown RBP7.76□□□□□ -1.17
LSP1YPL004C TDA10P42938 290 aa7.76□□□□□ -1.17
LSP1YPL004C YJL049WP47048 450 aa7.76□□□□□ -1.17
LSP1YPL004C TAF6P53040 516 aa7.76□□□□□ -1.17
LSP1YPL004C ARE2P53629 642 aaKnown RBP7.76□□□□□ -1.17
LSP1YPL004C YNL260CP53846 198 aa7.76□□□□□ -1.17
LSP1YPL004C YPL109CQ02981 657 aa7.76□□□□□ -1.17
LSP1YPL004C YML131WQ03102 365 aa7.76□□□□□ -1.17
LSP1YPL004C TVP15Q03860 143 aa7.76□□□□□ -1.17
LSP1YPL004C YDL121CQ07541 149 aa7.76□□□□□ -1.17
LSP1YPL004C GPB1Q08886 897 aa7.76□□□□□ -1.17
LSP1YPL004C IOC2Q12072 812 aa7.76□□□□□ -1.17
LSP1YPL004C RGT2Q12300 763 aa7.76□□□□□ -1.17
LSP1YPL004C MST1P07236 462 aa7.75□□□□□ -1.17
LSP1YPL004C GAL7P08431 366 aa7.75□□□□□ -1.17
LSP1YPL004C CMP2P14747 604 aa7.75□□□□□ -1.17
LSP1YPL004C ART10P18634 518 aaKnown RBP7.75□□□□□ -1.17
LSP1YPL004C HXT4P32467 576 aa7.75□□□□□ -1.17
LSP1YPL004C SFC1P33303 322 aa7.75□□□□□ -1.17
LSP1YPL004C CBF5P33322 483 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
LSP1YPL004C PTH2P34222 208 aa7.75□□□□□ -1.17
LSP1YPL004C RMA1P36001 430 aaKnown RBP7.75□□□□□ -1.17
LSP1YPL004C EMC3P36039 253 aa7.75□□□□□ -1.17
LSP1YPL004C RRN3P36070 627 aa7.75□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms