RNA–Protein interactions for RNA: YLR170C

APS1, Transcript of Small subunit of the clathrin-associated adaptor complex AP-1, yeast

Gene APS1, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS1	YLR170C	CTP1	P38152	299 aa		4.65	□□□□□ -1.67
APS1	YLR170C	TAE1	P38340	232 aa		4.65	□□□□□ -1.67
APS1	YLR170C	PPX1	P38698	397 aa		4.65	□□□□□ -1.67
APS1	YLR170C	PCL5	P38794	229 aa		4.65	□□□□□ -1.67
APS1	YLR170C	UBA4	P38820	440 aa		4.65	□□□□□ -1.67
APS1	YLR170C	LIN1	P38852	340 aa	Predicted RBP	4.65	□□□□□ -1.67
APS1	YLR170C	GIP4	P39732	760 aa		4.65	□□□□□ -1.67
APS1	YLR170C	YJL070C	P40361	888 aa		4.65	□□□□□ -1.67
APS1	YLR170C	TDA10	P42938	290 aa		4.65	□□□□□ -1.67
APS1	YLR170C	ARC1	P46672	376 aa	Known RBP	4.65	□□□□□ -1.67
APS1	YLR170C	BIR1	P47134	954 aa		4.65	□□□□□ -1.67
APS1	YLR170C	TRM12	Q04235	462 aa		4.65	□□□□□ -1.67
APS1	YLR170C	RCO1	Q04779	684 aa		4.65	□□□□□ -1.67
APS1	YLR170C	GRS2	Q06817	618 aa		4.65	□□□□□ -1.67
APS1	YLR170C	MCD1	Q12158	566 aa		4.65	□□□□□ -1.67
APS1	YLR170C	MDY2	Q12285	212 aa		4.65	□□□□□ -1.67
APS1	YLR170C	UBR1	P19812	1950 aa		4.64	□□□□□ -1.67
APS1	YLR170C	SEM1	O94742	89 aa		4.64	□□□□□ -1.67
APS1	YLR170C	COX3	P00420	269 aa		4.64	□□□□□ -1.67
APS1	YLR170C	RAD3	P06839	778 aa		4.64	□□□□□ -1.67
APS1	YLR170C	YAR066W	P0CX18	203 aa		4.64	□□□□□ -1.67
APS1	YLR170C	YHR214W	P0CX19	203 aa		4.64	□□□□□ -1.67
APS1	YLR170C	POL30	P15873	258 aa	Known RBP	4.64	□□□□□ -1.67
APS1	YLR170C	YCR090C	P25654	182 aa	Known RBP	4.64	□□□□□ -1.67
APS1	YLR170C	TFB1	P32776	642 aa		4.64	□□□□□ -1.67
APS1	YLR170C	PTM1	P32857	523 aa		4.64	□□□□□ -1.67
APS1	YLR170C	LOS1	P33418	1100 aa	Predicted RBP	4.64	□□□□□ -1.67
APS1	YLR170C	SOL2	P37262	315 aa		4.64	□□□□□ -1.67
APS1	YLR170C	AXL2	P38928	823 aa		4.64	□□□□□ -1.67
APS1	YLR170C	SAP1	P39955	897 aa	Known RBP	4.64	□□□□□ -1.67
APS1	YLR170C	YEL073C	P39974	107 aa		4.64	□□□□□ -1.67
APS1	YLR170C	HOS4	P40480	1083 aa		4.64	□□□□□ -1.67
APS1	YLR170C	IRR1	P40541	1150 aa		4.64	□□□□□ -1.67
APS1	YLR170C	AXL1	P40851	1208 aa		4.64	□□□□□ -1.67
APS1	YLR170C	STB2	P46679	850 aa		4.64	□□□□□ -1.67
APS1	YLR170C	TRS85	P46944	698 aa		4.64	□□□□□ -1.67
APS1	YLR170C	NNF1	P47149	201 aa		4.64	□□□□□ -1.67
APS1	YLR170C	MPS2	P53159	387 aa		4.64	□□□□□ -1.67
APS1	YLR170C	UBX4	P54730	416 aa		4.64	□□□□□ -1.67
APS1	YLR170C	GAS3	Q03655	524 aa		4.64	□□□□□ -1.67
APS1	YLR170C	TRM82	Q03774	444 aa		4.64	□□□□□ -1.67
APS1	YLR170C	VHS1	Q03785	461 aa		4.64	□□□□□ -1.67
APS1	YLR170C	YMR155W	Q03795	547 aa		4.64	□□□□□ -1.67
APS1	YLR170C	VTA1	Q06263	330 aa		4.64	□□□□□ -1.67
APS1	YLR170C	OMS1	Q06668	471 aa		4.64	□□□□□ -1.67
APS1	YLR170C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
APS1	YLR170C	RTT10	Q08924	1013 aa		4.64	□□□□□ -1.67
APS1	YLR170C	TMA46	Q12000	345 aa	Known RBP	4.64	□□□□□ -1.67
APS1	YLR170C	UPC2	Q12151	913 aa		4.64	□□□□□ -1.67
APS1	YLR170C	AHA1	Q12449	350 aa	Known RBP	4.64	□□□□□ -1.67
APS1	YLR170C	YPL247C	Q12523	523 aa		4.64	□□□□□ -1.67
APS1	YLR170C	DFG16	Q99234	619 aa		4.64	□□□□□ -1.67
APS1	YLR170C	YPR089W	O13585	888 aa		4.63	□□□□□ -1.67
APS1	YLR170C	SPT3	P06844	337 aa		4.63	□□□□□ -1.67
APS1	YLR170C	SEC53	P07283	254 aa	Known RBP	4.63	□□□□□ -1.67
APS1	YLR170C	FUM1	P08417	488 aa	Known RBP	4.63	□□□□□ -1.67
APS1	YLR170C	YSC84	P32793	468 aa		4.63	□□□□□ -1.67
APS1	YLR170C	FTH1	P38310	465 aa		4.63	□□□□□ -1.67
APS1	YLR170C	PHO89	P38361	574 aa		4.63	□□□□□ -1.67
APS1	YLR170C	NPT1	P39683	429 aa	Known RBP	4.63	□□□□□ -1.67
APS1	YLR170C	MAD3	P47074	515 aa		4.63	□□□□□ -1.67
APS1	YLR170C	TIS11	P47977	285 aa		4.63	□□□□□ -1.67
APS1	YLR170C	ECL1	P48235	211 aa		4.63	□□□□□ -1.67
APS1	YLR170C	TAF6	P53040	516 aa		4.63	□□□□□ -1.67
APS1	YLR170C	SHY1	P53266	389 aa		4.63	□□□□□ -1.67
APS1	YLR170C	SNO2	P53823	222 aa		4.63	□□□□□ -1.67
APS1	YLR170C	SWS2	P53937	143 aa		4.63	□□□□□ -1.67
APS1	YLR170C	SLM2	P53955	656 aa		4.63	□□□□□ -1.67
APS1	YLR170C	ARP4	P80428	489 aa		4.63	□□□□□ -1.67
APS1	YLR170C	OSH6	Q02201	448 aa		4.63	□□□□□ -1.67
APS1	YLR170C	NHP10	Q03435	203 aa		4.63	□□□□□ -1.67
APS1	YLR170C	GOT1	Q03554	138 aa		4.63	□□□□□ -1.67
APS1	YLR170C	TVP15	Q03860	143 aa		4.63	□□□□□ -1.67
APS1	YLR170C	ARG7	Q04728	441 aa		4.63	□□□□□ -1.67
APS1	YLR170C	MRX10	Q05648	414 aa		4.63	□□□□□ -1.67
APS1	YLR170C	VAM6	Q07468	1049 aa		4.63	□□□□□ -1.67
APS1	YLR170C	TRM8	Q12009	286 aa		4.63	□□□□□ -1.67
APS1	YLR170C	UBX3	Q12229	455 aa		4.63	□□□□□ -1.67
APS1	YLR170C	YBL113C	Q7M4S9	792 aa		4.63	□□□□□ -1.67
APS1	YLR170C	HSH49	Q99181	213 aa	Predicted RBP	4.63	□□□□□ -1.67
APS1	YLR170C	HEM2	P05373	342 aa		4.62	□□□□□ -1.67
APS1	YLR170C	RHO2	P06781	192 aa		4.62	□□□□□ -1.67
APS1	YLR170C	RSR1	P13856	272 aa		4.62	□□□□□ -1.67
APS1	YLR170C	HSC82	P15108	705 aa	Known RBP	4.62	□□□□□ -1.67
APS1	YLR170C	RPB4	P20433	221 aa	Predicted RBP	4.62	□□□□□ -1.67
APS1	YLR170C	CLN2	P20438	545 aa		4.62	□□□□□ -1.67
APS1	YLR170C	SKT5	P34226	696 aa		4.62	□□□□□ -1.67
APS1	YLR170C	UTH1	P36135	365 aa		4.62	□□□□□ -1.67
APS1	YLR170C	RPF2	P36160	344 aa	Known RBP	4.62	□□□□□ -1.67
APS1	YLR170C	HSM3	P38348	480 aa		4.62	□□□□□ -1.67
APS1	YLR170C	EFM1	P38732	585 aa		4.62	□□□□□ -1.67
APS1	YLR170C	YJL206C	P39529	758 aa		4.62	□□□□□ -1.67
APS1	YLR170C	TIF34	P40217	347 aa	Known RBP	4.62	□□□□□ -1.67
APS1	YLR170C	COA1	P40452	197 aa		4.62	□□□□□ -1.67
APS1	YLR170C	DSN1	P40568	576 aa		4.62	□□□□□ -1.67
APS1	YLR170C	TEL2	P53038	688 aa		4.62	□□□□□ -1.67
APS1	YLR170C	CLD1	P53264	445 aa		4.62	□□□□□ -1.67
APS1	YLR170C	RMI1	Q02685	241 aa		4.62	□□□□□ -1.67
APS1	YLR170C	ROT1	Q03691	256 aa		4.62	□□□□□ -1.67
APS1	YLR170C	CSN9	Q03981	162 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms