RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C SGF29P25554 259 aa2.23□□□□□ -2.05
SSD1YDR293C MGT1P26188 188 aa2.23□□□□□ -2.05
SSD1YDR293C PMI40P29952 429 aaKnown RBP2.23□□□□□ -2.05
SSD1YDR293C FRE1P32791 686 aa2.23□□□□□ -2.05
SSD1YDR293C SRP101P32916 621 aa2.23□□□□□ -2.05
SSD1YDR293C DBP7P36120 742 aaKnown RBP2.23□□□□□ -2.05
SSD1YDR293C ZRG8P40021 1076 aa2.23□□□□□ -2.05
SSD1YDR293C SWM2P40342 146 aa2.23□□□□□ -2.05
SSD1YDR293C IRC5P43610 853 aa2.23□□□□□ -2.05
SSD1YDR293C ROK1P45818 564 aaPredicted RBP2.23□□□□□ -2.05
SSD1YDR293C YJL045WP47052 634 aa2.23□□□□□ -2.05
SSD1YDR293C BIR1P47134 954 aa2.23□□□□□ -2.05
SSD1YDR293C GNP1P48813 663 aa2.23□□□□□ -2.05
SSD1YDR293C NIT3P49954 291 aa2.23□□□□□ -2.05
SSD1YDR293C SHE4P51534 789 aa2.23□□□□□ -2.05
SSD1YDR293C GET1P53192 235 aa2.23□□□□□ -2.05
SSD1YDR293C REX2P54964 269 aaKnown RBP2.23□□□□□ -2.05
SSD1YDR293C NHX1Q04121 633 aa2.23□□□□□ -2.05
SSD1YDR293C SHS1Q07657 551 aa2.23□□□□□ -2.05
SSD1YDR293C YLR001CQ07895 862 aa2.23□□□□□ -2.05
SSD1YDR293C MUM3Q08750 479 aa2.23□□□□□ -2.05
SSD1YDR293C PGC1Q08959 321 aa2.23□□□□□ -2.05
SSD1YDR293C GPM2Q12008 311 aa2.23□□□□□ -2.05
SSD1YDR293C YLL054CQ12244 843 aa2.23□□□□□ -2.05
SSD1YDR293C NSI1Q12457 570 aa2.23□□□□□ -2.05
SSD1YDR293C YOL159C-AQ3E769 90 aa2.23□□□□□ -2.05
SSD1YDR293C ATP6P00854 259 aa2.23□□□□□ -2.05
SSD1YDR293C TPK2P06245 380 aa2.23□□□□□ -2.05
SSD1YDR293C RHO2P06781 192 aa2.23□□□□□ -2.05
SSD1YDR293C FUS1P11710 512 aa2.23□□□□□ -2.05
SSD1YDR293C CMP2P14747 604 aa2.23□□□□□ -2.05
SSD1YDR293C AAC3P18238 307 aa2.23□□□□□ -2.05
SSD1YDR293C PUP3P25451 205 aaKnown RBP2.23□□□□□ -2.05
SSD1YDR293C AAD3P25612 363 aa2.23□□□□□ -2.05
SSD1YDR293C NGG1P32494 702 aa2.23□□□□□ -2.05
SSD1YDR293C SGE1P33335 543 aa2.23□□□□□ -2.05
SSD1YDR293C SPC29P33419 253 aa2.23□□□□□ -2.05
SSD1YDR293C YKR078WP36158 585 aaKnown RBP2.23□□□□□ -2.05
SSD1YDR293C PIM1P36775 1133 aa2.23□□□□□ -2.05
SSD1YDR293C YCR087C-AP37263 153 aa2.23□□□□□ -2.05
SSD1YDR293C FSH1P38777 243 aaKnown RBP2.23□□□□□ -2.05
SSD1YDR293C QNS1P38795 714 aaKnown RBP2.23□□□□□ -2.05
SSD1YDR293C KHA1P40309 873 aa2.23□□□□□ -2.05
SSD1YDR293C YIL089WP40500 205 aa2.23□□□□□ -2.05
SSD1YDR293C YJL107CP42947 387 aa2.23□□□□□ -2.05
SSD1YDR293C ORC5P50874 479 aa2.23□□□□□ -2.05
SSD1YDR293C RRN5Q02983 363 aa2.23□□□□□ -2.05
SSD1YDR293C VHS1Q03785 461 aa2.23□□□□□ -2.05
SSD1YDR293C RRT8Q08219 342 aa2.23□□□□□ -2.05
SSD1YDR293C YTM1Q12024 460 aaPredicted RBP2.23□□□□□ -2.05
SSD1YDR293C MTF1P14908 341 aaKnown RBP2.23□□□□□ -2.05
SSD1YDR293C PDC5P16467 563 aaKnown RBP2.23□□□□□ -2.05
SSD1YDR293C SAT4P25333 603 aaKnown RBP2.23□□□□□ -2.05
SSD1YDR293C BCS1P32839 456 aa2.23□□□□□ -2.05
SSD1YDR293C YKL151CP36059 337 aa2.23□□□□□ -2.05
SSD1YDR293C ROT2P38138 954 aa2.23□□□□□ -2.05
SSD1YDR293C PPE1P38796 400 aa2.23□□□□□ -2.05
SSD1YDR293C DUN1P39009 513 aa2.23□□□□□ -2.05
SSD1YDR293C FLC2P39719 783 aa2.23□□□□□ -2.05
SSD1YDR293C SAW1P39735 261 aa2.23□□□□□ -2.05
SSD1YDR293C AFG3P39925 761 aa2.23□□□□□ -2.05
SSD1YDR293C SCS2P40075 244 aaKnown RBP2.23□□□□□ -2.05
SSD1YDR293C PSF2P40359 213 aa2.23□□□□□ -2.05
SSD1YDR293C EFM5P53200 248 aaKnown RBP2.23□□□□□ -2.05
SSD1YDR293C COG2P53271 262 aa2.23□□□□□ -2.05
SSD1YDR293C IPI3P53877 555 aa2.23□□□□□ -2.05
SSD1YDR293C YNL010WP53981 241 aaKnown RBP2.23□□□□□ -2.05
SSD1YDR293C ABZ2Q03266 374 aa2.23□□□□□ -2.05
SSD1YDR293C YDR239CQ03780 787 aa2.23□□□□□ -2.05
SSD1YDR293C TPP1Q03796 238 aa2.23□□□□□ -2.05
SSD1YDR293C SPC19Q03954 165 aa2.23□□□□□ -2.05
SSD1YDR293C RRP17Q04031 235 aaPredicted RBP2.23□□□□□ -2.05
SSD1YDR293C HSP31Q04432 237 aa2.23□□□□□ -2.05
SSD1YDR293C CDA1Q06702 301 aa2.23□□□□□ -2.05
SSD1YDR293C GRC3Q07845 632 aa2.23□□□□□ -2.05
SSD1YDR293C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
SSD1YDR293C ESC8Q08119 714 aa2.23□□□□□ -2.05
SSD1YDR293C RSB1Q08417 382 aa2.23□□□□□ -2.05
SSD1YDR293C NBP2Q12163 236 aa2.23□□□□□ -2.05
SSD1YDR293C RRP42Q12277 265 aaPredicted RBP2.23□□□□□ -2.05
SSD1YDR293C RRD2Q12461 358 aa2.23□□□□□ -2.05
SSD1YDR293C SFG1Q12507 346 aa2.23□□□□□ -2.05
SSD1YDR293C YOR338WQ99326 363 aa2.23□□□□□ -2.05
SSD1YDR293C DIF1O13577 133 aa2.22□□□□□ -2.05
SSD1YDR293C SAM1P10659 382 aaKnown RBP2.22□□□□□ -2.05
SSD1YDR293C DBP3P20447 523 aaKnown RBP2.22□□□□□ -2.05
SSD1YDR293C RVS161P25343 265 aaKnown RBP2.22□□□□□ -2.05
SSD1YDR293C RRT12P25381 491 aa2.22□□□□□ -2.05
SSD1YDR293C REC104P33323 182 aa2.22□□□□□ -2.05
SSD1YDR293C CAF4P36130 643 aa2.22□□□□□ -2.05
SSD1YDR293C MUM2P38236 366 aa2.22□□□□□ -2.05
SSD1YDR293C HSL7P38274 827 aa2.22□□□□□ -2.05
SSD1YDR293C SRP72P38688 640 aaKnown RBP2.22□□□□□ -2.05
SSD1YDR293C AXL2P38928 823 aa2.22□□□□□ -2.05
SSD1YDR293C YJL206CP39529 758 aa2.22□□□□□ -2.05
SSD1YDR293C GPP2P40106 250 aaKnown RBP2.22□□□□□ -2.05
SSD1YDR293C RGI2P40188 164 aa2.22□□□□□ -2.05
SSD1YDR293C AYR1P40471 297 aa2.22□□□□□ -2.05
SSD1YDR293C IME4P41833 600 aa2.22□□□□□ -2.05
SSD1YDR293C PRP38Q00723 242 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms