Protein–RNA interactions for Protein: P40342

SWM2, Nucleolar protein SWM2, yeastyeast

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWM2P40342 NSR1YGR159C 1245 nt17.02■□□□□ 0.32
SWM2P40342 YML009W-BYML009W-B 477 nt16.48■□□□□ 0.23
SWM2P40342 NOP1YDL014W 984 nt15.87■□□□□ 0.13
SWM2P40342 MDJ1YFL016C 1536 nt15.64■□□□□ 0.09
SWM2P40342 YJL027CYJL027C 417 nt14.5□□□□□ -0.09
SWM2P40342 YKL036CYKL036C 393 nt13.97□□□□□ -0.17
SWM2P40342 SRX1YKL086W 384 nt13.76□□□□□ -0.21
SWM2P40342 SSA3YBL075C 1950 nt13.63□□□□□ -0.23
SWM2P40342 YBR190WYBR190W 312 nt13.63□□□□□ -0.23
SWM2P40342 Q0297Q0297 156 nt13.55□□□□□ -0.24
SWM2P40342 DBP2YNL112W 1641 nt13.5□□□□□ -0.25
SWM2P40342 RTC3YHR087W 336 nt13.31□□□□□ -0.28
SWM2P40342 YCR051WYCR051W 669 nt13□□□□□ -0.33
SWM2P40342 TRN1tP(UGG)A 72 nt12.81□□□□□ -0.36
SWM2P40342 SUF9tP(UGG)F 72 nt12.81□□□□□ -0.36
SWM2P40342 SUF8tP(UGG)H 72 nt12.81□□□□□ -0.36
SWM2P40342 tP(UGG)LtP(UGG)L 72 nt12.81□□□□□ -0.36
SWM2P40342 SUF7tP(UGG)M 72 nt12.81□□□□□ -0.36
SWM2P40342 tP(UGG)N1tP(UGG)N1 72 nt12.81□□□□□ -0.36
SWM2P40342 tP(UGG)N2tP(UGG)N2 72 nt12.81□□□□□ -0.36
SWM2P40342 tP(UGG)O1tP(UGG)O1 72 nt12.81□□□□□ -0.36
SWM2P40342 SUF11tP(UGG)O2 72 nt12.81□□□□□ -0.36
SWM2P40342 PUT4YOR348C 1884 nt12.8□□□□□ -0.36
SWM2P40342 RVS167YDR388W 1449 nt12.79□□□□□ -0.36
SWM2P40342 CCC1YLR220W 969 nt12.67□□□□□ -0.38
SWM2P40342 SCS3YGL126W 1143 nt12.49□□□□□ -0.41
SWM2P40342 POA1YBR022W 534 nt12.36□□□□□ -0.43
SWM2P40342 SCJ1YMR214W 1134 nt12.34□□□□□ -0.43
SWM2P40342 ARE1YCR048W 1833 nt12.34□□□□□ -0.43
SWM2P40342 YHR049C-AYHR049C-A 297 nt12.25□□□□□ -0.45
SWM2P40342 BSC6YOL137W 1494 nt12.24□□□□□ -0.45
SWM2P40342 SAH1YER043C 1350 nt12.18□□□□□ -0.46
SWM2P40342 RPP1BYDL130W 321 nt12.16□□□□□ -0.46
SWM2P40342 URN1YPR152C 1398 nt12.16□□□□□ -0.46
SWM2P40342 OPI9YLR338W 858 nt12.13□□□□□ -0.47
SWM2P40342 YOL085CYOL085C 342 nt12.1□□□□□ -0.47
SWM2P40342 SHR5YOL110W 714 nt12.1□□□□□ -0.47
SWM2P40342 SSA4YER103W 1929 nt12.07□□□□□ -0.48
SWM2P40342 SPT5YML010W 3192 nt12.04□□□□□ -0.48
SWM2P40342 RPN10YHR200W 807 nt11.97□□□□□ -0.49
SWM2P40342 PKP1YIL042C 1185 nt11.96□□□□□ -0.49
SWM2P40342 BUD23YCR047C 828 nt11.95□□□□□ -0.5
SWM2P40342 tP(UGG)O3tP(UGG)O3 72 nt11.89□□□□□ -0.51
SWM2P40342 DEP1YAL013W 1218 nt11.89□□□□□ -0.51
SWM2P40342 PUN1YLR414C 792 nt11.84□□□□□ -0.51
SWM2P40342 YNL208WYNL208W 600 nt11.74□□□□□ -0.53
SWM2P40342 PTC2YER089C 1395 nt11.73□□□□□ -0.53
SWM2P40342 NAB2YGL122C 1578 nt11.73□□□□□ -0.53
SWM2P40342 PET122YER153C 765 nt11.63□□□□□ -0.55
SWM2P40342 BDF1YLR399C 2061 nt11.61□□□□□ -0.55
SWM2P40342 MEP2YNL142W 1500 nt11.58□□□□□ -0.56
SWM2P40342 YJR018WYJR018W 363 nt11.57□□□□□ -0.56
SWM2P40342 YDJ1YNL064C 1230 nt11.56□□□□□ -0.56
SWM2P40342 SCR1SCR1 522 nt11.49□□□□□ -0.57
SWM2P40342 TAT1YBR069C 1860 nt11.48□□□□□ -0.57
SWM2P40342 YJL225CYJL225C 5277 nt11.47□□□□□ -0.57
SWM2P40342 DAL1YIR027C 1383 nt11.43□□□□□ -0.58
SWM2P40342 FIS1YIL065C 468 nt11.39□□□□□ -0.59
SWM2P40342 FPR4YLR449W 1179 nt11.39□□□□□ -0.59
SWM2P40342 GAR1YHR089C 618 nt11.37□□□□□ -0.59
SWM2P40342 PAC11YDR488C 1602 nt11.36□□□□□ -0.59
SWM2P40342 YMR090WYMR090W 684 nt11.36□□□□□ -0.59
SWM2P40342 INM2YDR287W 879 nt11.31□□□□□ -0.6
SWM2P40342 YPS1YLR120C 1710 nt11.3□□□□□ -0.6
SWM2P40342 DCW1YKL046C 1350 nt11.28□□□□□ -0.6
SWM2P40342 PHO4YFR034C 939 nt11.28□□□□□ -0.6
SWM2P40342 YHR165W-AYHR165W-A 312 nt11.28□□□□□ -0.6
SWM2P40342 RPP2BYDR382W 333 nt11.26□□□□□ -0.61
SWM2P40342 RRN5YLR141W 1092 nt11.24□□□□□ -0.61
SWM2P40342 EMI2YDR516C 1503 nt11.21□□□□□ -0.61
SWM2P40342 YBR220CYBR220C 1683 nt11.19□□□□□ -0.62
SWM2P40342 YDR095CYDR095C 411 nt11.13□□□□□ -0.63
SWM2P40342 RDN37-1RDN37-1 5354 nt11.08□□□□□ -0.63
SWM2P40342 RDN37-2RDN37-2 5354 nt11.08□□□□□ -0.63
SWM2P40342 YDL221WYDL221W 552 nt11.08□□□□□ -0.64
SWM2P40342 SDH1YKL148C 1923 nt11.06□□□□□ -0.64
SWM2P40342 ATS1YAL020C 1002 nt11.06□□□□□ -0.64
SWM2P40342 YJR120WYJR120W 351 nt11.06□□□□□ -0.64
SWM2P40342 SEC11YIR022W 504 nt11.05□□□□□ -0.64
SWM2P40342 YBL100CYBL100C 315 nt11.04□□□□□ -0.64
SWM2P40342 TIR1YER011W 765 nt11.03□□□□□ -0.64
SWM2P40342 YER088W-BYER088W-B 147 nt11.01□□□□□ -0.65
SWM2P40342 PCH2YBR186W 1695 nt10.99□□□□□ -0.65
SWM2P40342 SSA1YAL005C 1929 nt10.96□□□□□ -0.65
SWM2P40342 ALF1YNL148C 765 nt10.95□□□□□ -0.66
SWM2P40342 RPP2AYOL039W 321 nt10.95□□□□□ -0.66
SWM2P40342 GUT2YIL155C 1950 nt10.93□□□□□ -0.66
SWM2P40342 NVJ2YPR091C 2313 nt10.91□□□□□ -0.66
SWM2P40342 SCC4YER147C 1875 nt10.9□□□□□ -0.66
SWM2P40342 RSB1YOR049C 1065 nt10.88□□□□□ -0.67
SWM2P40342 CAC2YML102W 1407 nt10.87□□□□□ -0.67
SWM2P40342 FUN26YAL022C 1554 nt10.86□□□□□ -0.67
SWM2P40342 PTP1YDL230W 1008 nt10.84□□□□□ -0.67
SWM2P40342 BDH2YAL061W 1254 nt10.82□□□□□ -0.68
SWM2P40342 TRM9YML014W 840 nt10.77□□□□□ -0.69
SWM2P40342 SUF2tP(AGG)C 72 nt10.73□□□□□ -0.69
SWM2P40342 SUF10tP(AGG)N 72 nt10.73□□□□□ -0.69
SWM2P40342 IRC15YPL017C 1500 nt10.73□□□□□ -0.69
SWM2P40342 GIS3YLR094C 1509 nt10.7□□□□□ -0.7
SWM2P40342 YSC84YHR016C 1407 nt10.69□□□□□ -0.7
Retrieved 100 of 7,029 protein–RNA pairs in 22 ms