RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C SPB1P25582 841 aaPredicted RBP2.64□□□□□ -1.99
DNL4YOR005C MRE11P32829 692 aa2.64□□□□□ -1.99
DNL4YOR005C CBF5P33322 483 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
DNL4YOR005C PMT1P33775 817 aa2.64□□□□□ -1.99
DNL4YOR005C CMC1P36064 111 aa2.64□□□□□ -1.99
DNL4YOR005C KAE1P36132 386 aa2.64□□□□□ -1.99
DNL4YOR005C SIF2P38262 535 aa2.64□□□□□ -1.99
DNL4YOR005C GND1P38720 489 aaKnown RBP2.64□□□□□ -1.99
DNL4YOR005C ARO9P38840 513 aaPredicted RBP2.64□□□□□ -1.99
DNL4YOR005C HRB1P38922 454 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
DNL4YOR005C PLB1P39105 664 aa2.64□□□□□ -1.99
DNL4YOR005C NDC80P40460 691 aa2.64□□□□□ -1.99
DNL4YOR005C CTK3P46963 296 aaPredicted RBP2.64□□□□□ -1.99
DNL4YOR005C YGL242CP53066 181 aa2.64□□□□□ -1.99
DNL4YOR005C CUL3P53202 744 aa2.64□□□□□ -1.99
DNL4YOR005C TWF1P53250 332 aa2.64□□□□□ -1.99
DNL4YOR005C VTC3Q02725 835 aa2.64□□□□□ -1.99
DNL4YOR005C WAR1Q03631 944 aa2.64□□□□□ -1.99
DNL4YOR005C RPC11Q04307 110 aaPredicted RBP2.64□□□□□ -1.99
DNL4YOR005C RXT3Q07458 294 aa2.64□□□□□ -1.99
DNL4YOR005C RPN5Q12250 445 aaKnown RBP2.64□□□□□ -1.99
DNL4YOR005C YSP3P25036 478 aa2.63□□□□□ -1.99
DNL4YOR005C CDC20P26309 610 aa2.63□□□□□ -1.99
DNL4YOR005C RFA2P26754 273 aaKnown RBP2.63□□□□□ -1.99
DNL4YOR005C BUD14P27637 709 aa2.63□□□□□ -1.99
DNL4YOR005C NTH1P32356 751 aa2.63□□□□□ -1.99
DNL4YOR005C CDC5P32562 705 aa2.63□□□□□ -1.99
DNL4YOR005C GYP6P32806 458 aa2.63□□□□□ -1.99
DNL4YOR005C WBP1P33767 430 aaKnown RBP2.63□□□□□ -1.99
DNL4YOR005C AGP2P38090 596 aa2.63□□□□□ -1.99
DNL4YOR005C YBR053CP38235 358 aa2.63□□□□□ -1.99
DNL4YOR005C GDT1P38301 280 aaPredicted RBP2.63□□□□□ -1.99
DNL4YOR005C FET5P43561 622 aa2.63□□□□□ -1.99
DNL4YOR005C DLD2P46681 530 aaKnown RBP2.63□□□□□ -1.99
DNL4YOR005C PET130P47065 347 aa2.63□□□□□ -1.99
DNL4YOR005C SNF12P53628 566 aa2.63□□□□□ -1.99
DNL4YOR005C SNO2P53823 222 aa2.63□□□□□ -1.99
DNL4YOR005C BOP3P53958 396 aa2.63□□□□□ -1.99
DNL4YOR005C YDR239CQ03780 787 aa2.63□□□□□ -1.99
DNL4YOR005C GRX3Q03835 250 aa2.63□□□□□ -1.99
DNL4YOR005C YDR132CQ03900 495 aa2.63□□□□□ -1.99
DNL4YOR005C DPB4Q04603 196 aaKnown RBP2.63□□□□□ -1.99
DNL4YOR005C MRI1Q06489 411 aaKnown RBP2.63□□□□□ -1.99
DNL4YOR005C ACK1Q07622 623 aaPredicted RBP2.63□□□□□ -1.99
DNL4YOR005C PLP2Q12017 286 aa2.63□□□□□ -1.99
DNL4YOR005C RUD3Q12234 484 aaKnown RBP2.63□□□□□ -1.99
DNL4YOR005C GAL80P04387 435 aa2.63□□□□□ -1.99
DNL4YOR005C KGD2P19262 463 aaPredicted RBP2.63□□□□□ -1.99
DNL4YOR005C PHO13P19881 312 aa2.63□□□□□ -1.99
DNL4YOR005C CDC15P27636 974 aa2.63□□□□□ -1.99
DNL4YOR005C MVD1P32377 396 aaKnown RBP2.63□□□□□ -1.99
DNL4YOR005C ZUO1P32527 433 aaKnown RBP2.63□□□□□ -1.99
DNL4YOR005C SMI1P32566 505 aa2.63□□□□□ -1.99
DNL4YOR005C CTP1P38152 299 aa2.63□□□□□ -1.99
DNL4YOR005C SPT8P38915 602 aa2.63□□□□□ -1.99
DNL4YOR005C SWP82P43554 623 aa2.63□□□□□ -1.99
DNL4YOR005C CAK1P43568 368 aaPredicted RBP2.63□□□□□ -1.99
DNL4YOR005C UBC11P52492 156 aa2.63□□□□□ -1.99
DNL4YOR005C YGR079WP53249 370 aa2.63□□□□□ -1.99
DNL4YOR005C NSG2P53898 299 aa2.63□□□□□ -1.99
DNL4YOR005C KAP120Q02932 1032 aa2.63□□□□□ -1.99
DNL4YOR005C YPL034WQ03083 165 aa2.63□□□□□ -1.99
DNL4YOR005C GCN5Q03330 439 aa2.63□□□□□ -1.99
DNL4YOR005C BUD22Q04347 519 aaKnown RBP2.63□□□□□ -1.99
DNL4YOR005C LAS17Q12446 633 aa2.63□□□□□ -1.99
DNL4YOR005C CYC7P00045 113 aa2.62□□□□□ -1.99
DNL4YOR005C SIR3P06701 978 aa2.62□□□□□ -1.99
DNL4YOR005C RAD3P06839 778 aa2.62□□□□□ -1.99
DNL4YOR005C TCD2P36101 447 aaKnown RBP2.62□□□□□ -1.99
DNL4YOR005C YHR218WP38899 603 aa2.62□□□□□ -1.99
DNL4YOR005C PCL7P40186 285 aa2.62□□□□□ -1.99
DNL4YOR005C CTR1P49573 406 aa2.62□□□□□ -1.99
DNL4YOR005C MUP1P50276 574 aa2.62□□□□□ -1.99
DNL4YOR005C VID30P53076 958 aa2.62□□□□□ -1.99
DNL4YOR005C DAK1P54838 584 aaKnown RBP2.62□□□□□ -1.99
DNL4YOR005C RPS15Q01855 142 aaKnown RBP2.62□□□□□ -1.99
DNL4YOR005C RBS1Q05672 457 aaKnown RBP2.62□□□□□ -1.99
DNL4YOR005C STE23Q06010 1027 aa2.62□□□□□ -1.99
DNL4YOR005C CRN1Q06440 651 aa2.62□□□□□ -1.99
DNL4YOR005C LUC7Q07508 261 aaPredicted RBP2.62□□□□□ -1.99
DNL4YOR005C BAG7Q12128 409 aa2.62□□□□□ -1.99
DNL4YOR005C PSY3Q12318 242 aa2.62□□□□□ -1.99
DNL4YOR005C SAC3P46674 1301 aa2.62□□□□□ -1.99
DNL4YOR005C RPL1AP0CX43 217 aaKnown RBP2.62□□□□□ -1.99
DNL4YOR005C RPL1BP0CX44 217 aaKnown RBP2.62□□□□□ -1.99
DNL4YOR005C TIF3P34167 436 aaKnown RBP2.62□□□□□ -1.99
DNL4YOR005C DAD2P36162 133 aa2.62□□□□□ -1.99
DNL4YOR005C PXL1P36166 706 aa2.62□□□□□ -1.99
DNL4YOR005C ADH5P38113 351 aaKnown RBP2.62□□□□□ -1.99
DNL4YOR005C EFM2P38347 419 aa2.62□□□□□ -1.99
DNL4YOR005C YHR054CP38780 354 aa2.62□□□□□ -1.99
DNL4YOR005C REV7P38927 245 aa2.62□□□□□ -1.99
DNL4YOR005C ATF1P40353 525 aa2.62□□□□□ -1.99
DNL4YOR005C HXT14P42833 540 aa2.62□□□□□ -1.99
DNL4YOR005C MSE1P48525 536 aa2.62□□□□□ -1.99
DNL4YOR005C MSY1P48527 492 aa2.62□□□□□ -1.99
DNL4YOR005C CAF130P53280 1122 aaPredicted RBP2.62□□□□□ -1.99
DNL4YOR005C PRO2P54885 456 aaKnown RBP2.62□□□□□ -1.99
DNL4YOR005C YAT1P80235 687 aa2.62□□□□□ -1.99
DNL4YOR005C RRB1Q04225 511 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms