RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C YGR250CP53316 781 aaKnown RBP3.48□□□□□ -1.85
RPN13YLR421C CSL4P53859 292 aaPredicted RBP3.48□□□□□ -1.85
RPN13YLR421C DIG1Q03063 452 aaKnown RBP3.48□□□□□ -1.85
RPN13YLR421C VPS20Q04272 221 aa3.48□□□□□ -1.85
RPN13YLR421C UTP21Q06078 939 aaPredicted RBP3.48□□□□□ -1.85
RPN13YLR421C YLR352WQ06479 807 aa3.48□□□□□ -1.85
RPN13YLR421C TAH18Q12181 623 aa3.48□□□□□ -1.85
RPN13YLR421C RPA190P10964 1664 aaKnown RBP3.48□□□□□ -1.85
RPN13YLR421C PRD1P25375 712 aa3.47□□□□□ -1.85
RPN13YLR421C SGF29P25554 259 aa3.47□□□□□ -1.85
RPN13YLR421C SWH1P35845 1188 aa3.47□□□□□ -1.85
RPN13YLR421C TEF4P36008 412 aaKnown RBP3.47□□□□□ -1.85
RPN13YLR421C MRPL10P36520 322 aa3.47□□□□□ -1.85
RPN13YLR421C ARN1P38731 627 aa3.47□□□□□ -1.85
RPN13YLR421C UME6P39001 836 aa3.47□□□□□ -1.85
RPN13YLR421C VFA1P40080 203 aa3.47□□□□□ -1.85
RPN13YLR421C RSM25P40496 264 aa3.47□□□□□ -1.85
RPN13YLR421C GPD2P41911 440 aaKnown RBP3.47□□□□□ -1.85
RPN13YLR421C NNF2P53253 936 aa3.47□□□□□ -1.85
RPN13YLR421C TRS31Q03337 283 aa3.47□□□□□ -1.85
RPN13YLR421C RCF1Q03713 159 aa3.47□□□□□ -1.85
RPN13YLR421C RCO1Q04779 684 aa3.47□□□□□ -1.85
RPN13YLR421C NKP2Q06162 153 aa3.47□□□□□ -1.85
RPN13YLR421C VAM6Q07468 1049 aa3.47□□□□□ -1.85
RPN13YLR421C HSH49Q99181 213 aaPredicted RBP3.47□□□□□ -1.85
RPN13YLR421C RPB2P08518 1224 aaKnown RBP3.46□□□□□ -1.86
RPN13YLR421C RNR2P09938 399 aaKnown RBP3.46□□□□□ -1.86
RPN13YLR421C CKA1P15790 372 aa3.46□□□□□ -1.86
RPN13YLR421C PDX1P16451 410 aa3.46□□□□□ -1.86
RPN13YLR421C TPM1P17536 199 aaKnown RBP3.46□□□□□ -1.86
RPN13YLR421C RPC53P25441 422 aa3.46□□□□□ -1.86
RPN13YLR421C RAD51P25454 400 aa3.46□□□□□ -1.86
RPN13YLR421C PGS1P25578 521 aa3.46□□□□□ -1.86
RPN13YLR421C PTC6P25646 442 aa3.46□□□□□ -1.86
RPN13YLR421C RPS7AP26786 190 aaKnown RBP3.46□□□□□ -1.86
RPN13YLR421C MSS51P32335 436 aa3.46□□□□□ -1.86
RPN13YLR421C ERG3P32353 365 aa3.46□□□□□ -1.86
RPN13YLR421C MUM2P38236 366 aa3.46□□□□□ -1.86
RPN13YLR421C LRP1P38801 184 aaKnown RBP3.46□□□□□ -1.86
RPN13YLR421C ARB1P40024 610 aaKnown RBP3.46□□□□□ -1.86
RPN13YLR421C FMP10P40098 244 aa3.46□□□□□ -1.86
RPN13YLR421C AXL1P40851 1208 aa3.46□□□□□ -1.86
RPN13YLR421C SAD1P43589 448 aa3.46□□□□□ -1.86
RPN13YLR421C BSC5P53755 489 aa3.46□□□□□ -1.86
RPN13YLR421C YNL050CP53952 270 aa3.46□□□□□ -1.86
RPN13YLR421C YDR131CQ03899 556 aa3.46□□□□□ -1.86
RPN13YLR421C SYF1Q04048 859 aaPredicted RBP3.46□□□□□ -1.86
RPN13YLR421C AIM6Q07716 390 aa3.46□□□□□ -1.86
RPN13YLR421C RTT109Q07794 436 aa3.46□□□□□ -1.86
RPN13YLR421C TLG2Q08144 397 aa3.46□□□□□ -1.86
RPN13YLR421C YPL191CQ08930 360 aa3.46□□□□□ -1.86
RPN13YLR421C SEC39Q12745 709 aa3.46□□□□□ -1.86
RPN13YLR421C YKL068W-AQ3E826 78 aa3.46□□□□□ -1.86
RPN13YLR421C DUR1,2P32528 1835 aaKnown RBP3.45□□□□□ -1.86
RPN13YLR421C FUR1P18562 216 aaKnown RBP3.45□□□□□ -1.86
RPN13YLR421C SIP1P32578 815 aa3.45□□□□□ -1.86
RPN13YLR421C RPF2P36160 344 aaKnown RBP3.45□□□□□ -1.86
RPN13YLR421C GEX2P36173 615 aa3.45□□□□□ -1.86
RPN13YLR421C YAP3P38749 330 aa3.45□□□□□ -1.86
RPN13YLR421C ERC1P38767 581 aa3.45□□□□□ -1.86
RPN13YLR421C CAB2P40506 365 aa3.45□□□□□ -1.86
RPN13YLR421C HOS2P53096 452 aaPredicted RBP3.45□□□□□ -1.86
RPN13YLR421C MFB1Q04922 465 aa3.45□□□□□ -1.86
RPN13YLR421C THI3Q07471 609 aa3.45□□□□□ -1.86
RPN13YLR421C NMD4Q12129 218 aa3.45□□□□□ -1.86
RPN13YLR421C RRG1Q12167 365 aaPredicted RBP3.45□□□□□ -1.86
RPN13YLR421C SUL2Q12325 893 aa3.45□□□□□ -1.86
RPN13YLR421C HIF1Q12373 385 aa3.45□□□□□ -1.86
RPN13YLR421C PCD1Q12524 340 aa3.45□□□□□ -1.86
RPN13YLR421C NUP188P52593 1655 aaKnown RBP3.45□□□□□ -1.86
RPN13YLR421C GCN4P03069 281 aa3.44□□□□□ -1.86
RPN13YLR421C CTT1P06115 562 aa3.44□□□□□ -1.86
RPN13YLR421C RAD3P06839 778 aa3.44□□□□□ -1.86
RPN13YLR421C PET111P08468 800 aa3.44□□□□□ -1.86
RPN13YLR421C PFK2P16862 959 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
RPN13YLR421C MRP20P32387 263 aa3.44□□□□□ -1.86
RPN13YLR421C CNS1P33313 385 aa3.44□□□□□ -1.86
RPN13YLR421C FMP46P36141 133 aaKnown RBP3.44□□□□□ -1.86
RPN13YLR421C GDT1P38301 280 aaPredicted RBP3.44□□□□□ -1.86
RPN13YLR421C FLC2P39719 783 aa3.44□□□□□ -1.86
RPN13YLR421C VRG4P40107 337 aa3.44□□□□□ -1.86
RPN13YLR421C YJR061WP40355 935 aa3.44□□□□□ -1.86
RPN13YLR421C DUO1P53168 247 aaKnown RBP3.44□□□□□ -1.86
RPN13YLR421C YPR003CP53394 754 aa3.44□□□□□ -1.86
RPN13YLR421C VPS75P53853 264 aa3.44□□□□□ -1.86
RPN13YLR421C BET4Q00618 327 aa3.44□□□□□ -1.86
RPN13YLR421C YSA1Q01976 231 aa3.44□□□□□ -1.86
RPN13YLR421C ATG21Q02887 496 aa3.44□□□□□ -1.86
RPN13YLR421C FCP1Q03254 732 aa3.44□□□□□ -1.86
RPN13YLR421C VPS64Q03944 604 aa3.44□□□□□ -1.86
RPN13YLR421C GYL1Q04322 720 aa3.44□□□□□ -1.86
RPN13YLR421C YMR317WQ04893 1140 aa3.44□□□□□ -1.86
RPN13YLR421C PDR8Q06149 701 aa3.44□□□□□ -1.86
RPN13YLR421C LEA1Q08963 238 aaPredicted RBP3.44□□□□□ -1.86
RPN13YLR421C NBP2Q12163 236 aa3.44□□□□□ -1.86
RPN13YLR421C USO1P25386 1790 aa3.43□□□□□ -1.86
RPN13YLR421C BCK1Q01389 1478 aa3.43□□□□□ -1.86
RPN13YLR421C ARG3P05150 338 aa3.43□□□□□ -1.86
RPN13YLR421C TPK1P06244 397 aa3.43□□□□□ -1.86
RPN13YLR421C RED1P14291 827 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms