RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C ZPS1Q12512 249 aa1.32□□□□□ -2.2
SEC3YER008C DYN1P36022 4092 aa1.32□□□□□ -2.2
SEC3YER008C SEC3P33332 1336 aaKnown RBP1.32□□□□□ -2.2
SEC3YER008C FBP1P09201 348 aa1.32□□□□□ -2.2
SEC3YER008C HOM2P13663 365 aaKnown RBP1.32□□□□□ -2.2
SEC3YER008C URE2P23202 354 aaKnown RBP1.32□□□□□ -2.2
SEC3YER008C PTP1P25044 335 aa1.32□□□□□ -2.2
SEC3YER008C LCB1P25045 558 aaKnown RBP1.32□□□□□ -2.2
SEC3YER008C GEX2P36173 615 aa1.32□□□□□ -2.2
SEC3YER008C YHR218WP38899 603 aa1.32□□□□□ -2.2
SEC3YER008C PCL7P40186 285 aa1.32□□□□□ -2.2
SEC3YER008C LRO1P40345 661 aa1.32□□□□□ -2.2
SEC3YER008C SSU1P41930 458 aa1.32□□□□□ -2.2
SEC3YER008C BST1P43571 1029 aa1.32□□□□□ -2.2
SEC3YER008C GLO1P50107 326 aa1.32□□□□□ -2.2
SEC3YER008C BUD17P53727 317 aa1.32□□□□□ -2.2
SEC3YER008C RPA49Q01080 415 aaPredicted RBP1.32□□□□□ -2.2
SEC3YER008C YML037CQ03703 340 aa1.32□□□□□ -2.2
SEC3YER008C TMN2Q04562 672 aa1.32□□□□□ -2.2
SEC3YER008C DON1Q05610 365 aa1.32□□□□□ -2.2
SEC3YER008C SIL1Q08199 421 aa1.32□□□□□ -2.2
SEC3YER008C SGT2Q12118 346 aaKnown RBP1.32□□□□□ -2.2
SEC3YER008C RPN5Q12250 445 aaKnown RBP1.32□□□□□ -2.2
SEC3YER008C MDY2Q12285 212 aa1.32□□□□□ -2.2
SEC3YER008C LAS17Q12446 633 aa1.32□□□□□ -2.2
SEC3YER008C HSP82P02829 709 aaKnown RBP1.31□□□□□ -2.2
SEC3YER008C CDC24P11433 854 aaPredicted RBP1.31□□□□□ -2.2
SEC3YER008C MRP13P12686 339 aa1.31□□□□□ -2.2
SEC3YER008C ADH7P25377 361 aa1.31□□□□□ -2.2
SEC3YER008C AUR1P36107 401 aaPredicted RBP1.31□□□□□ -2.2
SEC3YER008C HEL1P36113 551 aa1.31□□□□□ -2.2
SEC3YER008C REG2P38232 338 aa1.31□□□□□ -2.2
SEC3YER008C CCT6P39079 546 aa1.31□□□□□ -2.2
SEC3YER008C BDH2P39713 417 aa1.31□□□□□ -2.2
SEC3YER008C VMA13P41807 478 aaKnown RBP1.31□□□□□ -2.2
SEC3YER008C IPI3P53877 555 aa1.31□□□□□ -2.2
SEC3YER008C PRP3Q03338 469 aaPredicted RBP1.31□□□□□ -2.2
SEC3YER008C YPT7P32939 208 aa1.31□□□□□ -2.2
SEC3YER008C STV1P37296 890 aa1.31□□□□□ -2.2
SEC3YER008C PCH2P38126 564 aa1.31□□□□□ -2.2
SEC3YER008C MOH1P38191 138 aa1.31□□□□□ -2.2
SEC3YER008C RTT105P40063 208 aa1.31□□□□□ -2.2
SEC3YER008C GCD10P41814 478 aa1.31□□□□□ -2.2
SEC3YER008C FYV8P46949 817 aaKnown RBP1.31□□□□□ -2.2
SEC3YER008C PRO2P54885 456 aaKnown RBP1.31□□□□□ -2.2
SEC3YER008C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
SEC3YER008C VAM6Q07468 1049 aa1.31□□□□□ -2.2
SEC3YER008C AIM6Q07716 390 aa1.31□□□□□ -2.2
SEC3YER008C TY3A-GQ12173 290 aa1.31□□□□□ -2.2
SEC3YER008C TY3A-IQ99219 290 aa1.31□□□□□ -2.2
SEC3YER008C YPT6Q99260 215 aa1.31□□□□□ -2.2
SEC3YER008C VCX1Q99385 411 aa1.31□□□□□ -2.2
SEC3YER008C PET122P10355 254 aa1.31□□□□□ -2.2
SEC3YER008C PRP2P20095 876 aaPredicted RBP1.31□□□□□ -2.2
SEC3YER008C MET18P40469 1032 aa1.31□□□□□ -2.2
SEC3YER008C ARF3P40994 183 aaRIP-Chip data1.31□□□□□ -2.2 RIP-Chip
SEC3YER008C IMO32P53219 342 aa1.31□□□□□ -2.2
SEC3YER008C EFR3Q03653 782 aaKnown RBP1.31□□□□□ -2.2
SEC3YER008C DPB4Q04603 196 aaKnown RBP1.31□□□□□ -2.2
SEC3YER008C IRC10Q08118 586 aa1.31□□□□□ -2.2
SEC3YER008C GPN2Q08726 347 aaPredicted RBP1.31□□□□□ -2.2
SEC3YER008C MRN1Q08925 612 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
SEC3YER008C YLR049CQ12110 428 aa1.31□□□□□ -2.2
SEC3YER008C PRS5Q12265 496 aaKnown RBP1.31□□□□□ -2.2
SEC3YER008C ARD1P07347 238 aaPredicted RBP1.31□□□□□ -2.2
SEC3YER008C URK1P27515 501 aa1.31□□□□□ -2.2
SEC3YER008C RPT5P33297 434 aaKnown RBP1.31□□□□□ -2.2
SEC3YER008C CCL1P37366 393 aa1.31□□□□□ -2.2
SEC3YER008C PFF1P38244 976 aa1.31□□□□□ -2.2
SEC3YER008C SAP1P39955 897 aaKnown RBP1.31□□□□□ -2.2
SEC3YER008C AIP1P46680 615 aaKnown RBP1.31□□□□□ -2.2
SEC3YER008C IMD4P50094 524 aaKnown RBP1.31□□□□□ -2.2
SEC3YER008C MNP1P53163 194 aaPredicted RBP1.31□□□□□ -2.2
SEC3YER008C PEF1P53238 335 aa1.31□□□□□ -2.2
SEC3YER008C ATP23P53722 227 aa1.31□□□□□ -2.2
SEC3YER008C RLM1Q12224 676 aa1.31□□□□□ -2.2
SEC3YER008C CEX1Q12453 761 aa1.31□□□□□ -2.2
SEC3YER008C CTF3Q12748 733 aa1.31□□□□□ -2.2
SEC3YER008C YML133CQ03099 1374 aa1.3□□□□□ -2.2
SEC3YER008C YLL067CQ07888 1374 aa1.3□□□□□ -2.2
SEC3YER008C RPN13O13563 156 aa1.3□□□□□ -2.2
SEC3YER008C GYP6P32806 458 aa1.3□□□□□ -2.2
SEC3YER008C SUR1P33300 382 aa1.3□□□□□ -2.2
SEC3YER008C TIF3P34167 436 aaKnown RBP1.3□□□□□ -2.2
SEC3YER008C YBL029WP38201 376 aa1.3□□□□□ -2.2
SEC3YER008C RRT2P38332 387 aa1.3□□□□□ -2.2
SEC3YER008C BUD16P39988 312 aa1.3□□□□□ -2.2
SEC3YER008C RGI2P40188 164 aa1.3□□□□□ -2.2
SEC3YER008C ATF1P40353 525 aa1.3□□□□□ -2.2
SEC3YER008C XBP1P40489 647 aa1.3□□□□□ -2.2
SEC3YER008C AGX1P43567 385 aa1.3□□□□□ -2.2
SEC3YER008C IMA1P53051 589 aa1.3□□□□□ -2.2
SEC3YER008C YNL144CP53907 740 aa1.3□□□□□ -2.2
SEC3YER008C UBP16Q02863 499 aa1.3□□□□□ -2.2
SEC3YER008C YDR109CQ04585 715 aa1.3□□□□□ -2.2
SEC3YER008C MRD1Q06106 887 aaKnown RBP1.3□□□□□ -2.2
SEC3YER008C TCO89Q08921 799 aa1.3□□□□□ -2.2
SEC3YER008C RIM20Q12033 661 aa1.3□□□□□ -2.2
SEC3YER008C ARG80P07249 177 aa1.3□□□□□ -2.2
SEC3YER008C TUB1P09733 447 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms