RNA–Protein interactions for RNA: YCR067C

SED4, Transcript of Integral ER membrane protein that stimulates Sar1p GTPase activity, yeast

Gene SED4, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SED4	YCR067C	GPH1	P06738	902 aa	Known RBP	4.95	□□□□□ -1.62
SED4	YCR067C	CCA1	P21269	546 aa		4.95	□□□□□ -1.62
SED4	YCR067C	HIR2	P32480	875 aa		4.95	□□□□□ -1.62
SED4	YCR067C	NOP4	P37838	685 aa	Known RBP	4.95	□□□□□ -1.62
SED4	YCR067C	YHR054C	P38780	354 aa		4.95	□□□□□ -1.62
SED4	YCR067C	RSC30	P38781	883 aa		4.95	□□□□□ -1.62
SED4	YCR067C	YKE4	P40544	346 aa		4.95	□□□□□ -1.62
SED4	YCR067C	ALB1	P47019	175 aa	Predicted RBP	4.95	□□□□□ -1.62
SED4	YCR067C	EFM3	P47163	339 aa		4.95	□□□□□ -1.62
SED4	YCR067C	SCW11	P53189	542 aa		4.95	□□□□□ -1.62
SED4	YCR067C	VAC7	P53950	1165 aa		4.95	□□□□□ -1.62
SED4	YCR067C	REX2	P54964	269 aa	Known RBP	4.95	□□□□□ -1.62
SED4	YCR067C	SDH1	Q00711	640 aa		4.95	□□□□□ -1.62
SED4	YCR067C	SLU7	Q02775	382 aa	Known RBP	4.95	□□□□□ -1.62
SED4	YCR067C	UGO1	Q03327	502 aa		4.95	□□□□□ -1.62
SED4	YCR067C	HER2	Q03557	464 aa		4.95	□□□□□ -1.62
SED4	YCR067C	YDL073W	Q07454	984 aa		4.95	□□□□□ -1.62
SED4	YCR067C	RAX1	Q08760	435 aa		4.95	□□□□□ -1.62
SED4	YCR067C	YRR1	Q12172	810 aa		4.95	□□□□□ -1.62
SED4	YCR067C	YGK3	Q12222	375 aa	Predicted RBP	4.95	□□□□□ -1.62
SED4	YCR067C	WTM1	Q12363	437 aa	Known RBP	4.95	□□□□□ -1.62
SED4	YCR067C	CDC19	P00549	500 aa	Known RBP	4.94	□□□□□ -1.62
SED4	YCR067C	HPR1	P17629	752 aa	Known RBP	4.94	□□□□□ -1.62
SED4	YCR067C	AIM26	P32858	118 aa		4.94	□□□□□ -1.62
SED4	YCR067C	YKL063C	P35725	167 aa		4.94	□□□□□ -1.62
SED4	YCR067C	TVP38	P36164	337 aa		4.94	□□□□□ -1.62
SED4	YCR067C	MMS4	P38257	691 aa		4.94	□□□□□ -1.62
SED4	YCR067C	YBR137W	P38276	179 aa		4.94	□□□□□ -1.62
SED4	YCR067C	STB5	P38699	743 aa		4.94	□□□□□ -1.62
SED4	YCR067C	MUP3	P38734	546 aa		4.94	□□□□□ -1.62
SED4	YCR067C	SFB3	P38810	929 aa		4.94	□□□□□ -1.62
SED4	YCR067C	SHU2	P38957	223 aa		4.94	□□□□□ -1.62
SED4	YCR067C	VMA7	P39111	118 aa		4.94	□□□□□ -1.62
SED4	YCR067C	EXO1	P39875	702 aa		4.94	□□□□□ -1.62
SED4	YCR067C	FIR1	P40020	876 aa		4.94	□□□□□ -1.62
SED4	YCR067C	YGR168C	P53293	376 aa		4.94	□□□□□ -1.62
SED4	YCR067C	GCN5	Q03330	439 aa		4.94	□□□□□ -1.62
SED4	YCR067C	MRX10	Q05648	414 aa		4.94	□□□□□ -1.62
SED4	YCR067C	ENT2	Q05785	613 aa		4.94	□□□□□ -1.62
SED4	YCR067C	SGT1	Q08446	395 aa		4.94	□□□□□ -1.62
SED4	YCR067C	SMF3	Q12078	473 aa	Predicted RBP	4.94	□□□□□ -1.62
SED4	YCR067C	CFT2	Q12102	859 aa	Predicted RBP	4.94	□□□□□ -1.62
SED4	YCR067C	YHR213W-A	Q8TGT4	77 aa		4.94	□□□□□ -1.62
SED4	YCR067C	PUT2	P07275	575 aa		4.94	□□□□□ -1.62
SED4	YCR067C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SED4	YCR067C	DIT1	P21623	536 aa		4.94	□□□□□ -1.62
SED4	YCR067C	CIN8	P27895	1000 aa		4.94	□□□□□ -1.62
SED4	YCR067C	KTR4	P38131	464 aa		4.94	□□□□□ -1.62
SED4	YCR067C	MBA1	P38300	278 aa		4.94	□□□□□ -1.62
SED4	YCR067C	ACO2	P39533	789 aa		4.94	□□□□□ -1.62
SED4	YCR067C	YIR007W	P40566	764 aa		4.94	□□□□□ -1.62
SED4	YCR067C	GCD10	P41814	478 aa		4.94	□□□□□ -1.62
SED4	YCR067C	ROM1	P53046	1155 aa		4.94	□□□□□ -1.62
SED4	YCR067C	YGR283C	P53336	341 aa	Predicted RBP	4.94	□□□□□ -1.62
SED4	YCR067C	NHX1	Q04121	633 aa		4.94	□□□□□ -1.62
SED4	YCR067C	UAF30	Q08747	228 aa		4.94	□□□□□ -1.62
SED4	YCR067C	ACF2	Q12168	779 aa		4.94	□□□□□ -1.62
SED4	YCR067C	RTR2	Q12378	196 aa		4.94	□□□□□ -1.62
SED4	YCR067C	SEC53	P07283	254 aa	Known RBP	4.94	□□□□□ -1.62
SED4	YCR067C	AAT2	P23542	418 aa	Known RBP	4.94	□□□□□ -1.62
SED4	YCR067C	PEX1	P24004	1043 aa		4.94	□□□□□ -1.62
SED4	YCR067C	RHB1	P25378	209 aa		4.94	□□□□□ -1.62
SED4	YCR067C	SGF29	P25554	259 aa		4.94	□□□□□ -1.62
SED4	YCR067C	PPZ1	P26570	692 aa		4.94	□□□□□ -1.62
SED4	YCR067C	HSL7	P38274	827 aa		4.94	□□□□□ -1.62
SED4	YCR067C	YHR020W	P38708	688 aa	Known RBP	4.94	□□□□□ -1.62
SED4	YCR067C	MNN9	P39107	395 aa	Known RBP	4.94	□□□□□ -1.62
SED4	YCR067C	YJL218W	P40892	196 aa	Known RBP	4.94	□□□□□ -1.62
SED4	YCR067C	AAD14	P42884	376 aa		4.94	□□□□□ -1.62
SED4	YCR067C	GSM1	P42950	618 aa		4.94	□□□□□ -1.62
SED4	YCR067C	HAM1	P47119	197 aa	Known RBP	4.94	□□□□□ -1.62
SED4	YCR067C	YJR154W	P47181	346 aa		4.94	□□□□□ -1.62
SED4	YCR067C	NBP35	P52920	328 aa		4.94	□□□□□ -1.62
SED4	YCR067C	COG1	P53079	417 aa		4.94	□□□□□ -1.62
SED4	YCR067C	LSM3	P57743	89 aa	Known RBP	4.94	□□□□□ -1.62
SED4	YCR067C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SED4	YCR067C	MRPL13	Q02204	264 aa		4.94	□□□□□ -1.62
SED4	YCR067C	ELP3	Q02908	557 aa	Known RBP	4.94	□□□□□ -1.62
SED4	YCR067C	RAD33	Q04231	177 aa		4.94	□□□□□ -1.62
SED4	YCR067C	YMR111C	Q04461	462 aa	Predicted RBP	4.94	□□□□□ -1.62
SED4	YCR067C	UBX5	Q06682	500 aa		4.94	□□□□□ -1.62
SED4	YCR067C	SYT1	Q06836	1226 aa		4.94	□□□□□ -1.62
SED4	YCR067C	DTD1	Q07648	150 aa	Known RBP	4.94	□□□□□ -1.62
SED4	YCR067C	GPB1	Q08886	897 aa		4.94	□□□□□ -1.62
SED4	YCR067C	YOL107W	Q12239	342 aa		4.94	□□□□□ -1.62
SED4	YCR067C	HTA2	P04912	132 aa		4.93	□□□□□ -1.62
SED4	YCR067C	GLN4	P13188	809 aa	Known RBP	4.93	□□□□□ -1.62
SED4	YCR067C	YAP1	P19880	650 aa	Known RBP	4.93	□□□□□ -1.62
SED4	YCR067C	VBA3	P25594	458 aa		4.93	□□□□□ -1.62
SED4	YCR067C	VBA5	P36172	582 aa		4.93	□□□□□ -1.62
SED4	YCR067C	YBL029W	P38201	376 aa		4.93	□□□□□ -1.62
SED4	YCR067C	YHR033W	P38690	423 aa		4.93	□□□□□ -1.62
SED4	YCR067C	SWD1	P39706	426 aa		4.93	□□□□□ -1.62
SED4	YCR067C	PTR3	P43606	678 aa		4.93	□□□□□ -1.62
SED4	YCR067C	NUP85	P46673	744 aa		4.93	□□□□□ -1.62
SED4	YCR067C	APS3	P47064	194 aa		4.93	□□□□□ -1.62
SED4	YCR067C	MTR3	P48240	250 aa	Predicted RBP	4.93	□□□□□ -1.62
SED4	YCR067C	ALG11	P53954	548 aa	Known RBP	4.93	□□□□□ -1.62
SED4	YCR067C	DOT1	Q04089	582 aa	Known RBP	4.93	□□□□□ -1.62
SED4	YCR067C	EMI2	Q04409	500 aa	Known RBP	4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms