RNA–Protein interactions for RNA: YCR067C

SED4, Transcript of Integral ER membrane protein that stimulates Sar1p GTPase activity, yeastyeast

Gene SED4, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED4YCR067C SPA2P23201 1466 aaKnown RBP8.63□□□□□ -1.03
SED4YCR067C SGS1P35187 1447 aa8.41□□□□□ -1.06
SED4YCR067C INO80P53115 1489 aa8.35□□□□□ -1.07
SED4YCR067C SSN2P38931 1420 aa8.34□□□□□ -1.07
SED4YCR067C SKI3P17883 1432 aaKnown RBP8.07□□□□□ -1.12
SED4YCR067C TY1B-DR4Q07793 1604 aa8.06□□□□□ -1.12
SED4YCR067C TCB3Q03640 1545 aaKnown RBP8.01□□□□□ -1.13
SED4YCR067C CHD1P32657 1468 aa7.93□□□□□ -1.14
SED4YCR067C HSL1P34244 1518 aa7.83□□□□□ -1.16
SED4YCR067C SIN3P22579 1536 aa7.8□□□□□ -1.16
SED4YCR067C THO2P53552 1597 aaKnown RBP7.75□□□□□ -1.17
SED4YCR067C XRN1P22147 1528 aaKnown RBP7.74□□□□□ -1.17
SED4YCR067C DRS1P32892 752 aaKnown RBP7.73□□□□□ -1.17
SED4YCR067C HIR3P47171 1648 aa7.71□□□□□ -1.17
SED4YCR067C MMS22Q06164 1454 aa7.71□□□□□ -1.18
SED4YCR067C SSK2P53599 1579 aa7.7□□□□□ -1.18
SED4YCR067C SPT6P23615 1451 aaKnown RBP7.69□□□□□ -1.18
SED4YCR067C REV3P14284 1504 aa7.63□□□□□ -1.19
SED4YCR067C UFD4P33202 1483 aa7.61□□□□□ -1.19
SED4YCR067C ESP1Q03018 1630 aa7.6□□□□□ -1.19
SED4YCR067C NUP170P38181 1502 aa7.57□□□□□ -1.2
SED4YCR067C MYO2P19524 1574 aaKnown RBP7.57□□□□□ -1.2
SED4YCR067C STU1P38198 1513 aa7.54□□□□□ -1.2
SED4YCR067C MON2P48563 1636 aaPredicted RBP7.51□□□□□ -1.21
SED4YCR067C POL1P13382 1468 aa7.51□□□□□ -1.21
SED4YCR067C SWR1Q05471 1514 aa7.48□□□□□ -1.21
SED4YCR067C ECM5Q03214 1411 aa7.46□□□□□ -1.22
SED4YCR067C ATG2P53855 1592 aa7.41□□□□□ -1.22
SED4YCR067C TRM732Q03496 1420 aa7.39□□□□□ -1.23
SED4YCR067C YPK9Q12697 1472 aa7.39□□□□□ -1.23
SED4YCR067C MYO4P32492 1471 aa7.39□□□□□ -1.23
SED4YCR067C MLP2P40457 1679 aa7.37□□□□□ -1.23
SED4YCR067C BPT1P14772 1559 aa7.35□□□□□ -1.23
SED4YCR067C SPP41P38904 1435 aa7.35□□□□□ -1.23
SED4YCR067C TY1B-DR3Q99231 1755 aa7.35□□□□□ -1.23
SED4YCR067C YOR1P53049 1477 aa7.34□□□□□ -1.23
SED4YCR067C DNA2P38859 1522 aa7.33□□□□□ -1.24
SED4YCR067C YTA7P40340 1379 aa7.32□□□□□ -1.24
SED4YCR067C TAF2P23255 1407 aa7.32□□□□□ -1.24
SED4YCR067C TY2B-LR1P0C2J3 1770 aa7.31□□□□□ -1.24
SED4YCR067C TY2B-FP0CX63 1770 aa7.31□□□□□ -1.24
SED4YCR067C TY2B-GR2P0CX64 1770 aa7.31□□□□□ -1.24
SED4YCR067C TY2B-CP25384 1770 aa7.31□□□□□ -1.24
SED4YCR067C TY2B-DR2Q03494 1770 aa7.31□□□□□ -1.24
SED4YCR067C TY1B-DR1Q03855 1755 aa7.31□□□□□ -1.24
SED4YCR067C TY2B-DR3Q07791 1770 aaKnown RBP7.31□□□□□ -1.24
SED4YCR067C TY2B-OR1Q12113 1770 aa7.31□□□□□ -1.24
SED4YCR067C TY2B-DR1Q12472 1770 aa7.31□□□□□ -1.24
SED4YCR067C TY2B-OR2Q12501 1770 aa7.31□□□□□ -1.24
SED4YCR067C SCC2Q04002 1493 aa7.31□□□□□ -1.24
SED4YCR067C RKR1Q04781 1562 aa7.3□□□□□ -1.24
SED4YCR067C TY2B-BQ12491 1770 aa7.27□□□□□ -1.25
SED4YCR067C IKI3Q06706 1349 aaKnown RBP7.27□□□□□ -1.25
SED4YCR067C NSR1P27476 414 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25not detected
SED4YCR067C PEP1P32319 1579 aa7.27□□□□□ -1.25
SED4YCR067C BUD4P47136 1447 aa7.27□□□□□ -1.25
SED4YCR067C NOP2P40991 618 aaKnown RBP7.26□□□□□ -1.25
SED4YCR067C ULS1Q08562 1619 aa7.25□□□□□ -1.25
SED4YCR067C RPO31P04051 1460 aa7.23□□□□□ -1.25
SED4YCR067C SMC4Q12267 1418 aa7.23□□□□□ -1.25
SED4YCR067C SNQ2P32568 1501 aaKnown RBP7.23□□□□□ -1.25
SED4YCR067C TY1B-HO13535 1793 aa7.2□□□□□ -1.26
SED4YCR067C TY1B-DR5P0C2I2 1755 aa7.2□□□□□ -1.26
SED4YCR067C TY1B-DR6P0C2I3 1755 aa7.2□□□□□ -1.26
SED4YCR067C TY1B-LR2P0C2I5 1755 aa7.2□□□□□ -1.26
SED4YCR067C TY1B-LR3P0C2I6 1755 aaKnown RBP7.2□□□□□ -1.26
SED4YCR067C TY1B-PR1P0C2I9 1755 aaKnown RBP7.2□□□□□ -1.26
SED4YCR067C TY1B-PR2P0C2J0 1756 aa7.2□□□□□ -1.26
SED4YCR067C TY1B-PR3P0C2J1 1755 aaKnown RBP7.2□□□□□ -1.26
SED4YCR067C TY1B-JR1P47098 1755 aa7.2□□□□□ -1.26
SED4YCR067C TY1B-ML2Q03434 1755 aaKnown RBP7.2□□□□□ -1.26
SED4YCR067C TY1B-ER1Q03612 1755 aa7.2□□□□□ -1.26
SED4YCR067C TY1B-ML1Q04711 1755 aaKnown RBP7.2□□□□□ -1.26
SED4YCR067C TY1B-GR2Q12269 1755 aa7.2□□□□□ -1.26
SED4YCR067C TY1B-OLQ12273 1755 aa7.2□□□□□ -1.26
SED4YCR067C TY1B-PLQ12414 1755 aaKnown RBP7.2□□□□□ -1.26
SED4YCR067C YCF1P39109 1515 aaKnown RBP7.2□□□□□ -1.26
SED4YCR067C ESC1Q03661 1658 aaKnown RBP7.2□□□□□ -1.26
SED4YCR067C TY3B-GQ99315 1547 aa7.18□□□□□ -1.26
SED4YCR067C YBT1P32386 1661 aa7.17□□□□□ -1.26
SED4YCR067C PDR10P51533 1564 aa7.16□□□□□ -1.26
SED4YCR067C TOP2P06786 1428 aaKnown RBP7.16□□□□□ -1.26
SED4YCR067C TY1B-BRQ12193 1756 aa7.15□□□□□ -1.26
SED4YCR067C TY1B-GR3Q12316 1755 aa7.15□□□□□ -1.26
SED4YCR067C TY1B-ORQ92393 1755 aa7.15□□□□□ -1.26
SED4YCR067C KOG1P38873 1557 aa7.15□□□□□ -1.26
SED4YCR067C PDR15Q04182 1529 aaKnown RBP7.14□□□□□ -1.27
SED4YCR067C STH1P32597 1359 aa7.13□□□□□ -1.27
SED4YCR067C PDR5P33302 1511 aaKnown RBP7.11□□□□□ -1.27
SED4YCR067C SSM4P40318 1319 aa7.11□□□□□ -1.27
SED4YCR067C TY1B-JR2P47100 1755 aaKnown RBP7.08□□□□□ -1.28
SED4YCR067C TY1B-ER2Q03619 1755 aa7.08□□□□□ -1.28
SED4YCR067C TY1B-MR1Q04214 1755 aa7.08□□□□□ -1.28
SED4YCR067C TY1B-MR2Q04670 1755 aaKnown RBP7.08□□□□□ -1.28
SED4YCR067C TY1B-LR1Q12088 1755 aaKnown RBP7.08□□□□□ -1.28
SED4YCR067C TY1B-NL1Q12112 1755 aa7.08□□□□□ -1.28
SED4YCR067C TY1B-GR1Q12141 1755 aa7.08□□□□□ -1.28
SED4YCR067C TY1B-BLQ12490 1755 aa7.08□□□□□ -1.28
SED4YCR067C RSE1Q04693 1361 aaKnown RBP7.06□□□□□ -1.28
SED4YCR067C IRC20Q06554 1556 aa7.06□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms