RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W ASE1P50275 885 aa2.47□□□□□ -2.01
SEC22YLR268W MRPL13Q02204 264 aa2.47□□□□□ -2.01
SEC22YLR268W RSM28Q03430 361 aa2.47□□□□□ -2.01
SEC22YLR268W YEH2Q07950 538 aa2.47□□□□□ -2.01
SEC22YLR268W RPL15AP05748 204 aaKnown RBP2.46□□□□□ -2.02
SEC22YLR268W SRP54P20424 541 aaKnown RBP2.46□□□□□ -2.02
SEC22YLR268W UBC1P21734 215 aaKnown RBP2.46□□□□□ -2.02
SEC22YLR268W AGA1P32323 725 aa2.46□□□□□ -2.02
SEC22YLR268W TFC3P34111 1160 aa2.46□□□□□ -2.02
SEC22YLR268W NTR2P36118 322 aaPredicted RBP2.46□□□□□ -2.02
SEC22YLR268W SPC34P36131 295 aa2.46□□□□□ -2.02
SEC22YLR268W PSY4P38193 441 aa2.46□□□□□ -2.02
SEC22YLR268W IFA38P38286 347 aa2.46□□□□□ -2.02
SEC22YLR268W ECM10P39987 644 aa2.46□□□□□ -2.02
SEC22YLR268W SMK1P41808 388 aa2.46□□□□□ -2.02
SEC22YLR268W COS10P52924 374 aa2.46□□□□□ -2.02
SEC22YLR268W APJ1P53940 528 aa2.46□□□□□ -2.02
SEC22YLR268W GTR1Q00582 310 aa2.46□□□□□ -2.02
SEC22YLR268W RPM2Q02773 1202 aa2.46□□□□□ -2.02
SEC22YLR268W TPK1P06244 397 aa2.45□□□□□ -2.02
SEC22YLR268W AGP2P38090 596 aa2.45□□□□□ -2.02
SEC22YLR268W PHO90P39535 881 aa2.45□□□□□ -2.02
SEC22YLR268W RPN11P43588 306 aaKnown RBP2.45□□□□□ -2.02
SEC22YLR268W CTF18P49956 741 aa2.45□□□□□ -2.02
SEC22YLR268W YTP1P53584 459 aa2.45□□□□□ -2.02
SEC22YLR268W IST1P53843 298 aaPredicted RBP2.45□□□□□ -2.02
SEC22YLR268W ERP1Q05359 219 aaKnown RBP2.45□□□□□ -2.02
SEC22YLR268W VAM6Q07468 1049 aa2.45□□□□□ -2.02
SEC22YLR268W YOL159CQ08300 171 aa2.45□□□□□ -2.02
SEC22YLR268W RDR1Q08904 546 aa2.45□□□□□ -2.02
SEC22YLR268W ERG27Q12452 347 aaKnown RBP2.45□□□□□ -2.02
SEC22YLR268W HXK2P04807 486 aaKnown RBP2.44□□□□□ -2.02
SEC22YLR268W PFK2P16862 959 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
SEC22YLR268W SPE2P21182 396 aa2.44□□□□□ -2.02
SEC22YLR268W MCM4P30665 933 aaKnown RBP2.44□□□□□ -2.02
SEC22YLR268W ESL2P36168 1195 aa2.44□□□□□ -2.02
SEC22YLR268W TIF5P38431 405 aaKnown RBP2.44□□□□□ -2.02
SEC22YLR268W PTH1P38876 190 aaKnown RBP2.44□□□□□ -2.02
SEC22YLR268W UME6P39001 836 aa2.44□□□□□ -2.02
SEC22YLR268W SMC3P47037 1230 aa2.44□□□□□ -2.02
SEC22YLR268W COG1P53079 417 aa2.44□□□□□ -2.02
SEC22YLR268W NUP100Q02629 959 aa2.44□□□□□ -2.02
SEC22YLR268W YML131WQ03102 365 aa2.44□□□□□ -2.02
SEC22YLR268W TFC6Q06339 672 aa2.44□□□□□ -2.02
SEC22YLR268W COX17Q12287 69 aa2.44□□□□□ -2.02
SEC22YLR268W TOP1P04786 769 aa2.43□□□□□ -2.02
SEC22YLR268W TY2A-LR1P0C2J4 438 aa2.43□□□□□ -2.02
SEC22YLR268W TY2A-FP0CX61 438 aa2.43□□□□□ -2.02
SEC22YLR268W TY2A-GR2P0CX62 438 aa2.43□□□□□ -2.02
SEC22YLR268W TY2A-CP25383 438 aa2.43□□□□□ -2.02
SEC22YLR268W GAC1P28006 793 aa2.43□□□□□ -2.02
SEC22YLR268W CNS1P33313 385 aa2.43□□□□□ -2.02
SEC22YLR268W SLC1P33333 303 aa2.43□□□□□ -2.02
SEC22YLR268W TEF4P36008 412 aaKnown RBP2.43□□□□□ -2.02
SEC22YLR268W MIA40P36046 403 aa2.43□□□□□ -2.02
SEC22YLR268W PHD1P36093 366 aa2.43□□□□□ -2.02
SEC22YLR268W SRO77P38163 1010 aa2.43□□□□□ -2.02
SEC22YLR268W RPH1P39956 796 aa2.43□□□□□ -2.02
SEC22YLR268W YER130CP39959 443 aa2.43□□□□□ -2.02
SEC22YLR268W KAP123P40069 1113 aaKnown RBP2.43□□□□□ -2.02
SEC22YLR268W BNA1P47096 177 aa2.43□□□□□ -2.02
SEC22YLR268W CSL4P53859 292 aaPredicted RBP2.43□□□□□ -2.02
SEC22YLR268W TDA7P53882 636 aaPredicted RBP2.43□□□□□ -2.02
SEC22YLR268W TY2A-DR2Q03483 438 aa2.43□□□□□ -2.02
SEC22YLR268W VID22Q05934 901 aa2.43□□□□□ -2.02
SEC22YLR268W SSP2Q08646 371 aa2.43□□□□□ -2.02
SEC22YLR268W APL4Q12028 832 aa2.43□□□□□ -2.02
SEC22YLR268W TY2A-BQ12260 438 aa2.43□□□□□ -2.02
SEC22YLR268W TY2A-OR2Q12293 438 aa2.43□□□□□ -2.02
SEC22YLR268W TY2A-DR1Q12392 438 aa2.43□□□□□ -2.02
SEC22YLR268W TY2A-OR1Q12439 438 aa2.43□□□□□ -2.02
SEC22YLR268W ARP6Q12509 438 aa2.43□□□□□ -2.02
SEC22YLR268W TY2A-DR3Q99303 438 aa2.43□□□□□ -2.02
SEC22YLR268W SNF1P06782 633 aaKnown RBP2.42□□□□□ -2.02
SEC22YLR268W MCK1P21965 375 aaKnown RBP2.42□□□□□ -2.02
SEC22YLR268W SSH4P32343 579 aa2.42□□□□□ -2.02
SEC22YLR268W RIC1P40395 1056 aa2.42□□□□□ -2.02
SEC22YLR268W YIL060WP40519 144 aa2.42□□□□□ -2.02
SEC22YLR268W IST3P40565 148 aaPredicted RBP2.42□□□□□ -2.02
SEC22YLR268W YFR020WP43600 232 aa2.42□□□□□ -2.02
SEC22YLR268W IKS1P47042 667 aa2.42□□□□□ -2.02
SEC22YLR268W RTT101P47050 842 aa2.42□□□□□ -2.02
SEC22YLR268W RRT6P53117 311 aaPredicted RBP2.42□□□□□ -2.02
SEC22YLR268W TRM8Q12009 286 aa2.42□□□□□ -2.02
SEC22YLR268W PCD1Q12524 340 aa2.42□□□□□ -2.02
SEC22YLR268W SET6Q12529 373 aa2.42□□□□□ -2.02
SEC22YLR268W YLR302CO13544 120 aa2.41□□□□□ -2.02
SEC22YLR268W LCB1P25045 558 aaKnown RBP2.41□□□□□ -2.02
SEC22YLR268W SRB5P32585 307 aa2.41□□□□□ -2.02
SEC22YLR268W YEL045CP32616 141 aa2.41□□□□□ -2.02
SEC22YLR268W YKL050CP35736 922 aa2.41□□□□□ -2.02
SEC22YLR268W RRN3P36070 627 aa2.41□□□□□ -2.02
SEC22YLR268W YER010CP40011 234 aa2.41□□□□□ -2.02
SEC22YLR268W SWP82P43554 623 aa2.41□□□□□ -2.02
SEC22YLR268W REG1Q00816 1014 aa2.41□□□□□ -2.02
SEC22YLR268W YMR018WQ04364 514 aa2.41□□□□□ -2.02
SEC22YLR268W HEL2Q05580 639 aaKnown RBP2.41□□□□□ -2.02
SEC22YLR268W FMP45Q07651 309 aa2.41□□□□□ -2.02
SEC22YLR268W TMA16Q08687 178 aa2.41□□□□□ -2.02
SEC22YLR268W MTF1P14908 341 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms