RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCD2	YKL027W	CRN1	Q06440	651 aa		11.55	□□□□□ -0.56
TCD2	YKL027W	MCD1	Q12158	566 aa		11.55	□□□□□ -0.56
TCD2	YKL027W	NAG1	Q8TGN9	163 aa		11.55	□□□□□ -0.56
TCD2	YKL027W	CDC10	P25342	322 aa	Known RBP	11.54	□□□□□ -0.56
TCD2	YKL027W	SFP1	P32432	683 aa		11.54	□□□□□ -0.56
TCD2	YKL027W	LRG1	P35688	1017 aa		11.54	□□□□□ -0.56
TCD2	YKL027W	YPT52	P36018	234 aa	Known RBP	11.54	□□□□□ -0.56
TCD2	YKL027W	SRX1	P36077	127 aa		11.54	□□□□□ -0.56
TCD2	YKL027W	GIP4	P39732	760 aa		11.54	□□□□□ -0.56
TCD2	YKL027W	AXL1	P40851	1208 aa		11.54	□□□□□ -0.56
TCD2	YKL027W	TDA10	P42938	290 aa		11.54	□□□□□ -0.56
TCD2	YKL027W	RNY1	Q02933	434 aa	Known RBP	11.54	□□□□□ -0.56
TCD2	YKL027W	YMR155W	Q03795	547 aa		11.54	□□□□□ -0.56
TCD2	YKL027W	ARX1	Q03862	593 aa	Known RBP	11.54	□□□□□ -0.56
TCD2	YKL027W	EMI1	Q04406	187 aa		11.54	□□□□□ -0.56
TCD2	YKL027W	RCO1	Q04779	684 aa		11.54	□□□□□ -0.56
TCD2	YKL027W	HEM2	P05373	342 aa		11.53	□□□□□ -0.56
TCD2	YKL027W	YCR090C	P25654	182 aa	Known RBP	11.53	□□□□□ -0.56
TCD2	YKL027W	MCM5	P29496	775 aa	Known RBP	11.53	□□□□□ -0.56
TCD2	YKL027W	PTM1	P32857	523 aa		11.53	□□□□□ -0.56
TCD2	YKL027W	HSE1	P38753	452 aa		11.53	□□□□□ -0.56
TCD2	YKL027W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	11.53	□□□□□ -0.56	not detected
TCD2	YKL027W	CLD1	P53264	445 aa		11.53	□□□□□ -0.56
TCD2	YKL027W	SSL1	Q04673	461 aa	Predicted RBP	11.53	□□□□□ -0.56
TCD2	YKL027W	ALR1	Q08269	859 aa		11.53	□□□□□ -0.56
TCD2	YKL027W	VPS68	Q12016	184 aa		11.53	□□□□□ -0.56
TCD2	YKL027W	SLX5	P32828	619 aa	Known RBP	11.52	□□□□□ -0.57
TCD2	YKL027W	VPS41	P38959	992 aa		11.52	□□□□□ -0.57
TCD2	YKL027W	SNO2	P53823	222 aa		11.52	□□□□□ -0.57
TCD2	YKL027W	GOT1	Q03554	138 aa		11.52	□□□□□ -0.57
TCD2	YKL027W	SEC10	Q06245	871 aa		11.52	□□□□□ -0.57
TCD2	YKL027W	GRS2	Q06817	618 aa		11.52	□□□□□ -0.57
TCD2	YKL027W	FMP27	Q06179	2628 aa		11.52	□□□□□ -0.57
TCD2	YKL027W	RPF2	P36160	344 aa	Known RBP	11.51	□□□□□ -0.57
TCD2	YKL027W	YHR020W	P38708	688 aa	Known RBP	11.51	□□□□□ -0.57
TCD2	YKL027W	RRP3	P38712	501 aa	Known RBP	11.51	□□□□□ -0.57
TCD2	YKL027W	YHB1	P39676	399 aa	Known RBP	11.51	□□□□□ -0.57
TCD2	YKL027W	BIR1	P47134	954 aa		11.51	□□□□□ -0.57
TCD2	YKL027W	DAN4	P47179	1161 aa		11.51	□□□□□ -0.57
TCD2	YKL027W	ZRG17	P53735	605 aa		11.51	□□□□□ -0.57
TCD2	YKL027W	YML119W	Q03208	357 aa		11.51	□□□□□ -0.57
TCD2	YKL027W	TAF12	Q03761	539 aa		11.51	□□□□□ -0.57
TCD2	YKL027W	MFB1	Q04922	465 aa		11.51	□□□□□ -0.57
TCD2	YKL027W	HEL2	Q05580	639 aa	Known RBP	11.51	□□□□□ -0.57
TCD2	YKL027W	RSC3	Q06639	885 aa		11.51	□□□□□ -0.57
TCD2	YKL027W	TRM8	Q12009	286 aa		11.51	□□□□□ -0.57
TCD2	YKL027W	YPR089W	O13585	888 aa		11.5	□□□□□ -0.57
TCD2	YKL027W	COX3	P00420	269 aa		11.5	□□□□□ -0.57
TCD2	YKL027W	RSR1	P13856	272 aa		11.5	□□□□□ -0.57
TCD2	YKL027W	HSC82	P15108	705 aa	Known RBP	11.5	□□□□□ -0.57
TCD2	YKL027W	SKT5	P34226	696 aa		11.5	□□□□□ -0.57
TCD2	YKL027W	YHR045W	P38775	560 aa		11.5	□□□□□ -0.57
TCD2	YKL027W	MGS1	P40151	587 aa		11.5	□□□□□ -0.57
TCD2	YKL027W	GAT1	P43574	510 aa		11.5	□□□□□ -0.57
TCD2	YKL027W	RMI1	Q02685	241 aa		11.5	□□□□□ -0.57
TCD2	YKL027W	SHE9	Q04172	456 aa		11.5	□□□□□ -0.57
TCD2	YKL027W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	11.5	□□□□□ -0.57	not detected
TCD2	YKL027W	APC9	Q12107	265 aa		11.5	□□□□□ -0.57
TCD2	YKL027W	UPC2	Q12151	913 aa		11.5	□□□□□ -0.57
TCD2	YKL027W	YPL247C	Q12523	523 aa		11.5	□□□□□ -0.57
TCD2	YKL027W	NHA1	Q99271	985 aa		11.5	□□□□□ -0.57
TCD2	YKL027W	RPL17A	P05740	184 aa	Known RBP	11.49	□□□□□ -0.57
TCD2	YKL027W	RHO2	P06781	192 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	SWI5	P08153	709 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	YAR066W	P0CX18	203 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	YHR214W	P0CX19	203 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	NMT1	P14743	455 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	YSR3	P23501	404 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	VAC17	P25591	423 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	YSC84	P32793	468 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	MRE11	P32829	692 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	YKL100C	P34248	587 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	YBR062C	P38239	180 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	PFS1	P38872	237 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	LSM5	P40089	93 aa	Known RBP	11.49	□□□□□ -0.57
TCD2	YKL027W	TIF34	P40217	347 aa	Known RBP	11.49	□□□□□ -0.57
TCD2	YKL027W	RPL17B	P46990	184 aa	Known RBP	11.49	□□□□□ -0.57
TCD2	YKL027W	MAD3	P47074	515 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	AIF1	P52923	378 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	TVP15	Q03860	143 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	TRM12	Q04235	462 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	YOL019W	Q08157	551 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	TMA46	Q12000	345 aa	Known RBP	11.49	□□□□□ -0.57
TCD2	YKL027W	SRO7	Q12038	1033 aa		11.49	□□□□□ -0.57
TCD2	YKL027W	TUB1	P09733	447 aa	Known RBP	11.48	□□□□□ -0.57
TCD2	YKL027W	VPS34	P22543	875 aa		11.48	□□□□□ -0.57
TCD2	YKL027W	RSC6	P25632	483 aa		11.48	□□□□□ -0.57
TCD2	YKL027W	CIN8	P27895	1000 aa		11.48	□□□□□ -0.57
TCD2	YKL027W	RRN3	P36070	627 aa		11.48	□□□□□ -0.57
TCD2	YKL027W	VRP1	P37370	817 aa		11.48	□□□□□ -0.57
TCD2	YKL027W	HSM3	P38348	480 aa		11.48	□□□□□ -0.57
TCD2	YKL027W	WSC4	P38739	605 aa		11.48	□□□□□ -0.57
TCD2	YKL027W	EFM5	P53200	248 aa	Known RBP	11.48	□□□□□ -0.57
TCD2	YKL027W	IBD2	P53892	351 aa		11.48	□□□□□ -0.57
TCD2	YKL027W	VAM6	Q07468	1049 aa		11.48	□□□□□ -0.57
TCD2	YKL027W	PLB3	Q08108	686 aa		11.48	□□□□□ -0.57
TCD2	YKL027W	NOT5	Q12514	560 aa	Predicted RBP	11.48	□□□□□ -0.57
TCD2	YKL027W	PHO5	P00635	467 aa		11.47	□□□□□ -0.57
TCD2	YKL027W	YMR085W	P0CF18	432 aa		11.47	□□□□□ -0.57
TCD2	YKL027W	DHH1	P39517	506 aa	Known RBP	11.47	□□□□□ -0.57

Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms