RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.45	□□□□□ -1.86	not detected
NDC80	YIL144W	GPI10	P30777	616 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	MRPL9	P31334	269 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	SWC3	P31376	625 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	PPQ1	P32945	549 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	TIF4631	P39935	952 aa	Known RBP	3.45	□□□□□ -1.86
NDC80	YIL144W	YEL020C	P39994	560 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	SWP82	P43554	623 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	FYV8	P46949	817 aa	Known RBP	3.45	□□□□□ -1.86
NDC80	YIL144W	ASE1	P50275	885 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	HST1	P53685	503 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	YSA1	Q01976	231 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	RMT2	Q03305	412 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	GPN2	Q08726	347 aa	Predicted RBP	3.45	□□□□□ -1.86
NDC80	YIL144W	RTN2	Q12443	393 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	YOR019W	Q99248	730 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	RTC1	Q08281	1341 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	STE50	P25344	346 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	DMC1	P25453	334 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	GSH1	P32477	678 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	GCD7	P32502	381 aa	Predicted RBP	3.44	□□□□□ -1.86
NDC80	YIL144W	UGP1	P32861	499 aa	Known RBP	3.44	□□□□□ -1.86
NDC80	YIL144W	YPT53	P36019	220 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	VBA2	P38358	474 aa	Known RBP	3.44	□□□□□ -1.86
NDC80	YIL144W	LNP1	P38878	278 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	PFK26	P40433	827 aa	Known RBP	3.44	□□□□□ -1.86
NDC80	YIL144W	LCB2	P40970	561 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	ARF3	P40994	183 aa	RIP-Chip data	3.44	□□□□□ -1.86	not detected
NDC80	YIL144W	QRI1	P43123	477 aa	Known RBP	3.44	□□□□□ -1.86
NDC80	YIL144W	SHE10	P53075	577 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	FCP1	Q03254	732 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	DPB4	Q04603	196 aa	Known RBP	3.44	□□□□□ -1.86
NDC80	YIL144W	RCO1	Q04779	684 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	RAD34	Q06665	692 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	ATG23	Q06671	453 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	CYK3	Q07533	885 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	FRE6	Q12473	712 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	SAC3	P46674	1301 aa		3.44	□□□□□ -1.86
NDC80	YIL144W	AQY1	P0CD91	305 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	KAR3	P17119	729 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	PET123	P17558	318 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	CDC43	P18898	376 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	SAT4	P25333	603 aa	Known RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	PUP2	P32379	260 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	RPN2	P32565	945 aa	Known RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	NIP100	P33420	868 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	ALY1	P36117	915 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	UIP5	P36137	443 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	PAC2	P39937	518 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	GDI1	P39958	451 aa	Known RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	NAS2	P40555	220 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	LYS4	P49367	693 aa	Predicted RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	SGF73	P53165	657 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	BSC5	P53755	489 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	ERV25	P54837	211 aa	Known RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	CIK1	Q01649	594 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	YPL107W	Q02873	248 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	YMR111C	Q04461	462 aa	Predicted RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	CIR2	Q08822	631 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	ULA1	Q12059	462 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	PDH1	Q12428	516 aa	Known RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	AHA1	Q12449	350 aa	Known RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	MAK32	P23060	363 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	ADK2	P26364	225 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	KES1	P35844	434 aa	Known RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	RPF2	P36160	344 aa	Known RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	FLO10	P36170	1169 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	RFC1	P38630	861 aa	Known RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	GND1	P38720	489 aa	Known RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	RTS1	P38903	757 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	SPO22	P40511	975 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	YGL036W	P53185	909 aa	Predicted RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	NNF2	P53253	936 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	COG2	P53271	262 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	ADE16	P54113	591 aa	Known RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	RAD30	Q04049	632 aa		3.43	□□□□□ -1.86
NDC80	YIL144W	RIX7	Q07844	837 aa	Known RBP	3.43	□□□□□ -1.86
NDC80	YIL144W	GCN4	P03069	281 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	APE1	P14904	514 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	SIP1	P32578	815 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	SRB5	P32585	307 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	LAS1	P36146	502 aa	Predicted RBP	3.42	□□□□□ -1.86
NDC80	YIL144W	YHR131C	P38835	850 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.42	□□□□□ -1.86	RIP-Chip
NDC80	YIL144W	SLZ1	P40167	298 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	SEC9	P40357	651 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	YIL161W	P40449	235 aa	Known RBP	3.42	□□□□□ -1.86
NDC80	YIL144W	MNP1	P53163	194 aa	Predicted RBP	3.42	□□□□□ -1.86
NDC80	YIL144W	VPS75	P53853	264 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	VTC3	Q02725	835 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	OAZ1	Q02803	292 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	MUB1	Q03162	620 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	NGL3	Q03210	505 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	YDR109C	Q04585	715 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	GFD1	Q04839	188 aa	Known RBP	3.42	□□□□□ -1.86
NDC80	YIL144W	MLH2	Q07980	695 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	APL4	Q12028	832 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	RNA1	P11745	407 aa	Known RBP	3.42	□□□□□ -1.86
NDC80	YIL144W	ADY2	P25613	283 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	LAC1	P28496	418 aa		3.42	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms