RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C YCS4Q06156 1176 aa5.34□□□□□ -1.55
RAT1YOR048C RSB1Q08417 382 aa5.34□□□□□ -1.55
RAT1YOR048C GUK1P15454 187 aaKnown RBP5.34□□□□□ -1.55
RAT1YOR048C THR1P17423 357 aaKnown RBP5.34□□□□□ -1.55
RAT1YOR048C PHO87P25360 923 aa5.34□□□□□ -1.55
RAT1YOR048C UTP11P34247 250 aaPredicted RBP5.34□□□□□ -1.55
RAT1YOR048C SEO1P39709 593 aa5.34□□□□□ -1.55
RAT1YOR048C LAS21P40367 830 aa5.34□□□□□ -1.55
RAT1YOR048C CDC1P40986 491 aa5.34□□□□□ -1.55
RAT1YOR048C YGL108CP53139 140 aa5.34□□□□□ -1.55
RAT1YOR048C GND2P53319 492 aa5.34□□□□□ -1.55
RAT1YOR048C HPT1Q04178 221 aaKnown RBP5.34□□□□□ -1.55
RAT1YOR048C NRT1Q08485 598 aa5.34□□□□□ -1.55
RAT1YOR048C PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
RAT1YOR048C DST1P07273 309 aa5.34□□□□□ -1.56
RAT1YOR048C RPS5P26783 225 aaKnown RBP5.34□□□□□ -1.56
RAT1YOR048C CYS4P32582 507 aaKnown RBP5.34□□□□□ -1.56
RAT1YOR048C SDH3P33421 198 aa5.34□□□□□ -1.56
RAT1YOR048C NOP4P37838 685 aaKnown RBP5.34□□□□□ -1.56
RAT1YOR048C LYS9P38999 446 aa5.34□□□□□ -1.56
RAT1YOR048C FIR1P40020 876 aa5.34□□□□□ -1.56
RAT1YOR048C HMF1P40037 129 aaKnown RBP5.34□□□□□ -1.56
RAT1YOR048C YGR053CP53234 283 aa5.34□□□□□ -1.56
RAT1YOR048C TMA20P89886 181 aaPredicted RBP5.34□□□□□ -1.56
RAT1YOR048C TRS31Q03337 283 aa5.34□□□□□ -1.56
RAT1YOR048C INP2Q03824 705 aa5.34□□□□□ -1.56
RAT1YOR048C RPN9Q04062 393 aaKnown RBP5.34□□□□□ -1.56
RAT1YOR048C TAF11Q04226 346 aa5.34□□□□□ -1.56
RAT1YOR048C HRT3Q12347 344 aa5.34□□□□□ -1.56
RAT1YOR048C ATG11Q12527 1178 aa5.34□□□□□ -1.56
RAT1YOR048C TY1B-AO13527 1196 aaKnown RBP5.33□□□□□ -1.56
RAT1YOR048C PHO4P07270 312 aaKnown RBP5.33□□□□□ -1.56
RAT1YOR048C ACO1P19414 778 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
RAT1YOR048C CLB2P24869 491 aa5.33□□□□□ -1.56
RAT1YOR048C MDJ1P35191 511 aa5.33□□□□□ -1.56
RAT1YOR048C SIF2P38262 535 aa5.33□□□□□ -1.56
RAT1YOR048C YHR182WP38870 785 aa5.33□□□□□ -1.56
RAT1YOR048C RTT101P47050 842 aa5.33□□□□□ -1.56
RAT1YOR048C YJR054WP47114 497 aa5.33□□□□□ -1.56
RAT1YOR048C ALT2P52892 507 aa5.33□□□□□ -1.56
RAT1YOR048C NMA2P53204 395 aa5.33□□□□□ -1.56
RAT1YOR048C PLP1Q04004 230 aa5.33□□□□□ -1.56
RAT1YOR048C HFI1Q12060 488 aa5.33□□□□□ -1.56
RAT1YOR048C MDY2Q12285 212 aa5.33□□□□□ -1.56
RAT1YOR048C TAF3Q12297 353 aa5.33□□□□□ -1.56
RAT1YOR048C SEC53P07283 254 aaKnown RBP5.33□□□□□ -1.56
RAT1YOR048C RVS161P25343 265 aaKnown RBP5.33□□□□□ -1.56
RAT1YOR048C MAC1P35192 417 aa5.33□□□□□ -1.56
RAT1YOR048C MRP8P35719 219 aa5.33□□□□□ -1.56
RAT1YOR048C FAA2P39518 744 aa5.33□□□□□ -1.56
RAT1YOR048C VMA10P48836 114 aaKnown RBP5.33□□□□□ -1.56
RAT1YOR048C YPT32P51996 222 aaKnown RBP5.33□□□□□ -1.56
RAT1YOR048C YNL247WP53852 767 aaKnown RBP5.33□□□□□ -1.56
RAT1YOR048C GPI17Q04080 534 aa5.33□□□□□ -1.56
RAT1YOR048C MGR3Q04472 501 aa5.33□□□□□ -1.56
RAT1YOR048C YMR226CQ05016 267 aaKnown RBP5.33□□□□□ -1.56
RAT1YOR048C SWC7Q06707 132 aa5.33□□□□□ -1.56
RAT1YOR048C FMP25Q08023 583 aa5.33□□□□□ -1.56
RAT1YOR048C MUM3Q08750 479 aa5.33□□□□□ -1.56
RAT1YOR048C SGT2Q12118 346 aaKnown RBP5.33□□□□□ -1.56
RAT1YOR048C ECM29P38737 1868 aa5.33□□□□□ -1.56
RAT1YOR048C MET17P06106 444 aa5.32□□□□□ -1.56
RAT1YOR048C HSP60P19882 572 aaKnown RBP5.32□□□□□ -1.56
RAT1YOR048C YCR099CP25657 155 aa5.32□□□□□ -1.56
RAT1YOR048C CSE2P33308 149 aa5.32□□□□□ -1.56
RAT1YOR048C YBR053CP38235 358 aa5.32□□□□□ -1.56
RAT1YOR048C FAD1P38913 306 aa5.32□□□□□ -1.56
RAT1YOR048C PCF11P39081 626 aaPredicted RBP5.32□□□□□ -1.56
RAT1YOR048C YEL028WP39989 153 aa5.32□□□□□ -1.56
RAT1YOR048C EMC2P47133 292 aaKnown RBP5.32□□□□□ -1.56
RAT1YOR048C RMR1P53060 241 aa5.32□□□□□ -1.56
RAT1YOR048C COG5P53951 403 aa5.32□□□□□ -1.56
RAT1YOR048C YMR010WQ03687 405 aa5.32□□□□□ -1.56
RAT1YOR048C THP3Q12049 470 aaKnown RBP5.32□□□□□ -1.56
RAT1YOR048C GAL2P13181 574 aa5.32□□□□□ -1.56
RAT1YOR048C ATP12P22135 325 aa5.32□□□□□ -1.56
RAT1YOR048C NUP2P32499 720 aa5.32□□□□□ -1.56
RAT1YOR048C YKR015CP36111 568 aa5.32□□□□□ -1.56
RAT1YOR048C GIP1P38229 639 aa5.32□□□□□ -1.56
RAT1YOR048C ATP22P50273 684 aaPredicted RBP5.32□□□□□ -1.56
RAT1YOR048C LSC1P53598 329 aaKnown RBP5.32□□□□□ -1.56
RAT1YOR048C ESF2P53743 316 aaKnown RBP5.32□□□□□ -1.56
RAT1YOR048C FAP1P53971 965 aa5.32□□□□□ -1.56
RAT1YOR048C MUK1Q02866 612 aa5.32□□□□□ -1.56
RAT1YOR048C HSP31Q04432 237 aa5.32□□□□□ -1.56
RAT1YOR048C ECM7Q06200 448 aa5.32□□□□□ -1.56
RAT1YOR048C ECM30Q06673 1274 aa5.32□□□□□ -1.56
RAT1YOR048C NOP12Q08208 459 aaKnown RBP5.32□□□□□ -1.56
RAT1YOR048C FLC1Q08967 793 aa5.32□□□□□ -1.56
RAT1YOR048C CFT2Q12102 859 aaPredicted RBP5.32□□□□□ -1.56
RAT1YOR048C YLR049CQ12110 428 aa5.32□□□□□ -1.56
RAT1YOR048C MRH1Q12117 320 aaPredicted RBP5.32□□□□□ -1.56
RAT1YOR048C YLL054CQ12244 843 aa5.32□□□□□ -1.56
RAT1YOR048C BRR1Q99177 341 aaPredicted RBP5.32□□□□□ -1.56
RAT1YOR048C GAC1P28006 793 aa5.31□□□□□ -1.56
RAT1YOR048C GUA1P38625 525 aaKnown RBP5.31□□□□□ -1.56
RAT1YOR048C ARP1P38696 384 aa5.31□□□□□ -1.56
RAT1YOR048C PPX1P38698 397 aa5.31□□□□□ -1.56
RAT1YOR048C UTP9P38882 575 aaKnown RBP5.31□□□□□ -1.56
RAT1YOR048C EFM3P47163 339 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms