RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C IRR1P40541 1150 aa6.34□□□□□ -1.39
SCS7YMR272C RTS3P53289 263 aa6.34□□□□□ -1.39
SCS7YMR272C TIM13P53299 105 aa6.34□□□□□ -1.39
SCS7YMR272C SUN4P53616 420 aa6.34□□□□□ -1.39
SCS7YMR272C YAT1P80235 687 aa6.34□□□□□ -1.39
SCS7YMR272C RNT1Q02555 471 aa6.34□□□□□ -1.39
SCS7YMR272C PET117Q02771 107 aa6.34□□□□□ -1.39
SCS7YMR272C RPC11Q04307 110 aaPredicted RBP6.34□□□□□ -1.39
SCS7YMR272C POB3Q04636 552 aaKnown RBP6.34□□□□□ -1.39
SCS7YMR272C NUT2Q06213 157 aa6.34□□□□□ -1.39
SCS7YMR272C HRK1Q08732 759 aaKnown RBP6.34□□□□□ -1.39
SCS7YMR272C OCA6Q12454 224 aa6.34□□□□□ -1.39
SCS7YMR272C RSR1P13856 272 aa6.33□□□□□ -1.4
SCS7YMR272C ABF1P14164 731 aa6.33□□□□□ -1.4
SCS7YMR272C CLN1P20437 546 aa6.33□□□□□ -1.4
SCS7YMR272C SCL1P21243 252 aaKnown RBP6.33□□□□□ -1.4
SCS7YMR272C YEL043WP32618 956 aa6.33□□□□□ -1.4
SCS7YMR272C TOM20P35180 183 aa6.33□□□□□ -1.4
SCS7YMR272C PHO11P35842 467 aa6.33□□□□□ -1.4
SCS7YMR272C MRP21P38175 177 aa6.33□□□□□ -1.4
SCS7YMR272C IML3P38265 245 aa6.33□□□□□ -1.4
SCS7YMR272C YSW1P38280 609 aa6.33□□□□□ -1.4
SCS7YMR272C REI1P38344 393 aaPredicted RBP6.33□□□□□ -1.4
SCS7YMR272C PHO12P38693 467 aa6.33□□□□□ -1.4
SCS7YMR272C DBP8P38719 431 aa6.33□□□□□ -1.4
SCS7YMR272C CYC2P38909 366 aa6.33□□□□□ -1.4
SCS7YMR272C CCT4P39078 528 aaKnown RBP6.33□□□□□ -1.4
SCS7YMR272C YAL037WP39728 267 aa6.33□□□□□ -1.4
SCS7YMR272C SAP1P39955 897 aaKnown RBP6.33□□□□□ -1.4
SCS7YMR272C ALG8P40351 577 aa6.33□□□□□ -1.4
SCS7YMR272C SEC9P40357 651 aa6.33□□□□□ -1.4
SCS7YMR272C SUM1P46676 1062 aa6.33□□□□□ -1.4
SCS7YMR272C SET2P46995 733 aaKnown RBP6.33□□□□□ -1.4
SCS7YMR272C NBP35P52920 328 aa6.33□□□□□ -1.4
SCS7YMR272C ZRG17P53735 605 aa6.33□□□□□ -1.4
SCS7YMR272C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
SCS7YMR272C EMI1Q04406 187 aa6.33□□□□□ -1.4
SCS7YMR272C ARP9Q05123 467 aa6.33□□□□□ -1.4
SCS7YMR272C CDC73Q06697 393 aa6.33□□□□□ -1.4
SCS7YMR272C SEC39Q12745 709 aa6.33□□□□□ -1.4
SCS7YMR272C BRR2P32639 2163 aaKnown RBP6.33□□□□□ -1.4
SCS7YMR272C ERR1P0CX10 437 aa6.32□□□□□ -1.4
SCS7YMR272C ERR2P0CX11 437 aa6.32□□□□□ -1.4
SCS7YMR272C CDC24P11433 854 aaPredicted RBP6.32□□□□□ -1.4
SCS7YMR272C ACO1P19414 778 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
SCS7YMR272C VAN1P23642 535 aa6.32□□□□□ -1.4
SCS7YMR272C CWP1P28319 239 aa6.32□□□□□ -1.4
SCS7YMR272C HOG1P32485 435 aa6.32□□□□□ -1.4
SCS7YMR272C YPT52P36018 234 aaKnown RBP6.32□□□□□ -1.4
SCS7YMR272C NTR2P36118 322 aaPredicted RBP6.32□□□□□ -1.4
SCS7YMR272C GMH1P36125 273 aa6.32□□□□□ -1.4
SCS7YMR272C RPF2P36160 344 aaKnown RBP6.32□□□□□ -1.4
SCS7YMR272C PIM1P36775 1133 aa6.32□□□□□ -1.4
SCS7YMR272C OCA5P38738 679 aa6.32□□□□□ -1.4
SCS7YMR272C YHR045WP38775 560 aa6.32□□□□□ -1.4
SCS7YMR272C ECM1P39715 212 aa6.32□□□□□ -1.4
SCS7YMR272C ERR3P42222 437 aa6.32□□□□□ -1.4
SCS7YMR272C COG1P53079 417 aa6.32□□□□□ -1.4
SCS7YMR272C PEX8P53248 589 aa6.32□□□□□ -1.4
SCS7YMR272C VAC7P53950 1165 aa6.32□□□□□ -1.4
SCS7YMR272C UTP6Q02354 440 aaKnown RBP6.32□□□□□ -1.4
SCS7YMR272C NUP100Q02629 959 aa6.32□□□□□ -1.4
SCS7YMR272C YMR160WQ03823 816 aa6.32□□□□□ -1.4
SCS7YMR272C RRN11Q04712 507 aa6.32□□□□□ -1.4
SCS7YMR272C RCO1Q04779 684 aa6.32□□□□□ -1.4
SCS7YMR272C SML1Q04964 104 aa6.32□□□□□ -1.4
SCS7YMR272C ECI1Q05871 280 aa6.32□□□□□ -1.4
SCS7YMR272C TRM8Q12009 286 aa6.32□□□□□ -1.4
SCS7YMR272C RIO1Q12196 484 aaKnown RBP6.32□□□□□ -1.4
SCS7YMR272C AVL9Q12500 764 aa6.32□□□□□ -1.4
SCS7YMR272C IMA3P0CW40 589 aa6.31□□□□□ -1.4
SCS7YMR272C IMA4P0CW41 589 aa6.31□□□□□ -1.4
SCS7YMR272C RPL1AP0CX43 217 aaKnown RBP6.31□□□□□ -1.4
SCS7YMR272C RPL1BP0CX44 217 aaKnown RBP6.31□□□□□ -1.4
SCS7YMR272C CUP1-1P0CX80 61 aa6.31□□□□□ -1.4
SCS7YMR272C CUP1-2P0CX81 61 aa6.31□□□□□ -1.4
SCS7YMR272C RNA1P11745 407 aaKnown RBP6.31□□□□□ -1.4
SCS7YMR272C LAT1P12695 482 aaKnown RBP6.31□□□□□ -1.4
SCS7YMR272C YCL068CP25593 260 aa6.31□□□□□ -1.4
SCS7YMR272C URA10P30402 227 aa6.31□□□□□ -1.4
SCS7YMR272C MF(ALPHA)2P32435 120 aa6.31□□□□□ -1.4
SCS7YMR272C SPT16P32558 1035 aaKnown RBP6.31□□□□□ -1.4
SCS7YMR272C TFC3P34111 1160 aa6.31□□□□□ -1.4
SCS7YMR272C SKT5P34226 696 aa6.31□□□□□ -1.4
SCS7YMR272C YKL100CP34248 587 aa6.31□□□□□ -1.4
SCS7YMR272C LDB7P38210 180 aa6.31□□□□□ -1.4
SCS7YMR272C MED8P38304 223 aa6.31□□□□□ -1.4
SCS7YMR272C YBP1P38315 674 aa6.31□□□□□ -1.4
SCS7YMR272C WSC4P38739 605 aa6.31□□□□□ -1.4
SCS7YMR272C PCL5P38794 229 aa6.31□□□□□ -1.4
SCS7YMR272C ACO2P39533 789 aa6.31□□□□□ -1.4
SCS7YMR272C GIM4P40005 111 aaKnown RBP6.31□□□□□ -1.4
SCS7YMR272C ALR2P43553 858 aa6.31□□□□□ -1.4
SCS7YMR272C NAM8Q00539 523 aaKnown RBP6.31□□□□□ -1.4
SCS7YMR272C TRS31Q03337 283 aa6.31□□□□□ -1.4
SCS7YMR272C DIC1Q06143 298 aa6.31□□□□□ -1.4
SCS7YMR272C IMA2Q08295 589 aa6.31□□□□□ -1.4
SCS7YMR272C YDR061WQ12298 539 aa6.31□□□□□ -1.4
SCS7YMR272C SKM1Q12469 655 aa6.31□□□□□ -1.4
SCS7YMR272C RPP2BP02400 110 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms