RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C URE2P23202 354 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C MEF1P25039 761 aa0.94□□□□□ -2.26
RKR1YMR247C YCL002CP25565 263 aa0.94□□□□□ -2.26
RKR1YMR247C KSP1P38691 1029 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C CTK2P46962 323 aa0.94□□□□□ -2.26
RKR1YMR247C IML2P47031 731 aa0.94□□□□□ -2.26
RKR1YMR247C NPA3P47122 385 aa0.94□□□□□ -2.26
RKR1YMR247C VID30P53076 958 aa0.94□□□□□ -2.26
RKR1YMR247C YGR021WP53212 290 aa0.94□□□□□ -2.26
RKR1YMR247C RSM28Q03430 361 aa0.94□□□□□ -2.26
RKR1YMR247C HRD3Q05787 833 aa0.94□□□□□ -2.26
RKR1YMR247C WHI4Q07655 649 aaKnown RBP0.94□□□□□ -2.26
RKR1YMR247C SUT2Q12286 268 aa0.94□□□□□ -2.26
RKR1YMR247C YRF1-1P0CX20 1796 aa0.93□□□□□ -2.26
RKR1YMR247C YRF1-5P0CX21 1796 aa0.93□□□□□ -2.26
RKR1YMR247C YRF1-8P0CX22 1796 aa0.93□□□□□ -2.26
RKR1YMR247C DNF3Q12674 1656 aa0.93□□□□□ -2.26
RKR1YMR247C RPO31P04051 1460 aa0.93□□□□□ -2.26
RKR1YMR247C SPA2P23201 1466 aaKnown RBP0.93□□□□□ -2.26
RKR1YMR247C HSP82P02829 709 aaKnown RBP0.93□□□□□ -2.26
RKR1YMR247C ARG81P05085 880 aa0.93□□□□□ -2.26
RKR1YMR247C RHO2P06781 192 aa0.93□□□□□ -2.26
RKR1YMR247C PMS1P14242 873 aa0.93□□□□□ -2.26
RKR1YMR247C CDC26P14724 124 aa0.93□□□□□ -2.26
RKR1YMR247C RRP43P25359 394 aaPredicted RBP0.93□□□□□ -2.26
RKR1YMR247C VPS17P32913 551 aa0.93□□□□□ -2.26
RKR1YMR247C PAD1P33751 242 aaKnown RBP RIP-Chip data0.93□□□□□ -2.26not detected
RKR1YMR247C SWD1P39706 426 aa0.93□□□□□ -2.26
RKR1YMR247C EXO1P39875 702 aa0.93□□□□□ -2.26
RKR1YMR247C MAD2P40958 196 aa0.93□□□□□ -2.26
RKR1YMR247C ROK1P45818 564 aaPredicted RBP0.93□□□□□ -2.26
RKR1YMR247C FMS1P50264 508 aa0.93□□□□□ -2.26
RKR1YMR247C ERG26P53199 349 aaKnown RBP0.93□□□□□ -2.26
RKR1YMR247C ESF2P53743 316 aaKnown RBP0.93□□□□□ -2.26
RKR1YMR247C YNR071CP53757 342 aa0.93□□□□□ -2.26
RKR1YMR247C SOV1Q04748 898 aa0.93□□□□□ -2.26
RKR1YMR247C VTA1Q06263 330 aa0.93□□□□□ -2.26
RKR1YMR247C TPO3Q06451 622 aa0.93□□□□□ -2.26
RKR1YMR247C SRL1Q08673 210 aa0.93□□□□□ -2.26
RKR1YMR247C YOR378WQ08902 515 aa0.93□□□□□ -2.26
RKR1YMR247C HER1Q12276 1246 aa0.93□□□□□ -2.26
RKR1YMR247C TRM13Q12383 476 aa0.93□□□□□ -2.26
RKR1YMR247C DBP10Q12389 995 aaKnown RBP0.93□□□□□ -2.26
RKR1YMR247C SEC39Q12745 709 aa0.93□□□□□ -2.26
RKR1YMR247C TY1B-PR2P0C2J0 1756 aa0.93□□□□□ -2.26
RKR1YMR247C SNF2P22082 1703 aa0.93□□□□□ -2.26
RKR1YMR247C PDR12Q02785 1511 aa0.93□□□□□ -2.26
RKR1YMR247C ERR1P0CX10 437 aa0.93□□□□□ -2.26
RKR1YMR247C ERR2P0CX11 437 aa0.93□□□□□ -2.26
RKR1YMR247C CDC24P11433 854 aaPredicted RBP0.93□□□□□ -2.26
RKR1YMR247C CNA1P23287 553 aa0.93□□□□□ -2.26
RKR1YMR247C VMA16P23968 213 aa0.93□□□□□ -2.26
RKR1YMR247C NIP100P33420 868 aa0.93□□□□□ -2.26
RKR1YMR247C JNM1P36224 373 aa0.93□□□□□ -2.26
RKR1YMR247C ARF3P40994 183 aaRIP-Chip data0.93□□□□□ -2.26 RIP-Chip
RKR1YMR247C YFL054CP43549 646 aa0.93□□□□□ -2.26
RKR1YMR247C RFX1P48743 811 aa0.93□□□□□ -2.26
RKR1YMR247C RTS3P53289 263 aa0.93□□□□□ -2.26
RKR1YMR247C NCS2P53923 493 aaPredicted RBP0.93□□□□□ -2.26
RKR1YMR247C YLR455WQ06188 304 aa0.93□□□□□ -2.26
RKR1YMR247C BUD7Q08754 746 aa0.93□□□□□ -2.26
RKR1YMR247C RCN2Q12044 265 aa0.93□□□□□ -2.26
RKR1YMR247C LEU9Q12166 604 aaKnown RBP0.93□□□□□ -2.26
RKR1YMR247C PNO1Q99216 274 aaKnown RBP0.93□□□□□ -2.26
RKR1YMR247C CDC25P04821 1589 aa0.93□□□□□ -2.26
RKR1YMR247C USO1P25386 1790 aa0.93□□□□□ -2.26
RKR1YMR247C YBR085C-AO43137 85 aa0.93□□□□□ -2.26
RKR1YMR247C URA3P03962 267 aa0.93□□□□□ -2.26
RKR1YMR247C RNR3P21672 869 aaKnown RBP0.93□□□□□ -2.26
RKR1YMR247C MAK32P23060 363 aa0.93□□□□□ -2.26
RKR1YMR247C ATO2P32907 282 aa0.93□□□□□ -2.26
RKR1YMR247C PXL1P36166 706 aa0.93□□□□□ -2.26
RKR1YMR247C ESL2P36168 1195 aa0.93□□□□□ -2.26
RKR1YMR247C LAG1P38703 411 aa0.93□□□□□ -2.26
RKR1YMR247C MDM31P38880 579 aa0.93□□□□□ -2.26
RKR1YMR247C CIN4P39110 191 aa0.93□□□□□ -2.26
RKR1YMR247C NOP16P40007 231 aaKnown RBP0.93□□□□□ -2.26
RKR1YMR247C ELP2P42935 788 aa0.93□□□□□ -2.26
RKR1YMR247C AIP1P46680 615 aaKnown RBP0.93□□□□□ -2.26
RKR1YMR247C SHE10P53075 577 aa0.93□□□□□ -2.26
RKR1YMR247C SLI1P53304 468 aa0.93□□□□□ -2.26
RKR1YMR247C CRZ1P53968 678 aa0.93□□□□□ -2.26
RKR1YMR247C YMR254CQ04838 102 aa0.93□□□□□ -2.26
RKR1YMR247C NMD4Q12129 218 aa0.93□□□□□ -2.26
RKR1YMR247C RGT2Q12300 763 aa0.93□□□□□ -2.26
RKR1YMR247C SCM3Q12334 223 aa0.93□□□□□ -2.26
RKR1YMR247C TYR1P20049 452 aa0.92□□□□□ -2.26
RKR1YMR247C RPB8P20436 146 aa0.92□□□□□ -2.26
RKR1YMR247C PPZ2P33329 710 aa0.92□□□□□ -2.26
RKR1YMR247C CBP4P37267 147 aa0.92□□□□□ -2.26
RKR1YMR247C YBL029WP38201 376 aa0.92□□□□□ -2.26
RKR1YMR247C PCF11P39081 626 aaPredicted RBP0.92□□□□□ -2.26
RKR1YMR247C TMN3P40071 706 aa0.92□□□□□ -2.26
RKR1YMR247C YIR014WP40570 242 aa0.92□□□□□ -2.26
RKR1YMR247C ATG27P46989 271 aa0.92□□□□□ -2.26
RKR1YMR247C ASN1P49089 572 aaKnown RBP0.92□□□□□ -2.26
RKR1YMR247C GCV2P49095 1034 aa0.92□□□□□ -2.26
RKR1YMR247C GPG1P53130 126 aa0.92□□□□□ -2.26
RKR1YMR247C ATP23P53722 227 aa0.92□□□□□ -2.26
RKR1YMR247C YNL144CP53907 740 aa0.92□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms