RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W URE2P23202 354 aaKnown RBP2.1□□□□□ -2.07
CFT2YLR115W JEM1P40358 645 aa2.1□□□□□ -2.07
CFT2YLR115W GSM1P42950 618 aa2.1□□□□□ -2.07
CFT2YLR115W SLD3P53135 668 aa2.1□□□□□ -2.07
CFT2YLR115W MDR1P53258 950 aa2.1□□□□□ -2.07
CFT2YLR115W HOL1P53389 586 aa2.1□□□□□ -2.07
CFT2YLR115W TPO3Q06451 622 aa2.1□□□□□ -2.07
CFT2YLR115W CRT10Q08226 957 aa2.1□□□□□ -2.07
CFT2YLR115W CFT2Q12102 859 aaPredicted RBP2.1□□□□□ -2.07
CFT2YLR115W RRG1Q12167 365 aaPredicted RBP2.1□□□□□ -2.07
CFT2YLR115W HSH49Q99181 213 aaPredicted RBP2.1□□□□□ -2.07
CFT2YLR115W POM152P39685 1337 aa2.1□□□□□ -2.07
CFT2YLR115W CHO2P05374 869 aaKnown RBP2.1□□□□□ -2.07
CFT2YLR115W YUR1P26725 428 aa2.1□□□□□ -2.07
CFT2YLR115W RPT3P33298 428 aaKnown RBP2.1□□□□□ -2.07
CFT2YLR115W IRC8P47046 822 aa2.1□□□□□ -2.07
CFT2YLR115W SGM1P47166 707 aa2.1□□□□□ -2.07
CFT2YLR115W PUS4P48567 403 aaKnown RBP2.1□□□□□ -2.07
CFT2YLR115W GTR1Q00582 310 aa2.1□□□□□ -2.07
CFT2YLR115W BLS1Q06071 122 aa2.1□□□□□ -2.07
CFT2YLR115W PEX15Q08215 383 aa2.1□□□□□ -2.07
CFT2YLR115W YDR056CQ12025 205 aa2.1□□□□□ -2.07
CFT2YLR115W TAH18Q12181 623 aa2.1□□□□□ -2.07
CFT2YLR115W LCB4Q12246 624 aa2.1□□□□□ -2.07
CFT2YLR115W CRC1Q12289 327 aa2.1□□□□□ -2.07
CFT2YLR115W DBP10Q12389 995 aaKnown RBP2.1□□□□□ -2.07
CFT2YLR115W GCN2P15442 1659 aa2.1□□□□□ -2.07
CFT2YLR115W CET1O13297 549 aaPredicted RBP2.09□□□□□ -2.07
CFT2YLR115W RNA1P11745 407 aaKnown RBP2.09□□□□□ -2.07
CFT2YLR115W RRP43P25359 394 aaPredicted RBP2.09□□□□□ -2.07
CFT2YLR115W RAD26P40352 1085 aa2.09□□□□□ -2.07
CFT2YLR115W DJP1P40564 432 aa2.09□□□□□ -2.07
CFT2YLR115W FYV8P46949 817 aaKnown RBP2.09□□□□□ -2.07
CFT2YLR115W RBG2P53295 368 aaKnown RBP2.09□□□□□ -2.07
CFT2YLR115W RAD34Q06665 692 aa2.09□□□□□ -2.07
CFT2YLR115W RPC40P07703 335 aaKnown RBP2.09□□□□□ -2.07
CFT2YLR115W PRE2P30656 287 aaKnown RBP2.09□□□□□ -2.07
CFT2YLR115W RPN2P32565 945 aaKnown RBP2.09□□□□□ -2.07
CFT2YLR115W ASK1P35734 292 aa2.09□□□□□ -2.07
CFT2YLR115W PSY4P38193 441 aa2.09□□□□□ -2.07
CFT2YLR115W YAP3P38749 330 aa2.09□□□□□ -2.07
CFT2YLR115W ARO9P38840 513 aaPredicted RBP2.09□□□□□ -2.07
CFT2YLR115W YHR218WP38899 603 aa2.09□□□□□ -2.07
CFT2YLR115W KAP123P40069 1113 aaKnown RBP2.09□□□□□ -2.07
CFT2YLR115W EMP65P40085 556 aa2.09□□□□□ -2.07
CFT2YLR115W YIL024CP40543 189 aa2.09□□□□□ -2.07
CFT2YLR115W CIN1P40987 1014 aa2.09□□□□□ -2.07
CFT2YLR115W IRC7P43623 340 aa2.09□□□□□ -2.07
CFT2YLR115W SCS3P53012 380 aa2.09□□□□□ -2.07
CFT2YLR115W SCW4P53334 386 aaKnown RBP2.09□□□□□ -2.07
CFT2YLR115W MRPL19P53875 158 aa2.09□□□□□ -2.07
CFT2YLR115W RPL15BP54780 204 aaPredicted RBP2.09□□□□□ -2.07
CFT2YLR115W UBP16Q02863 499 aa2.09□□□□□ -2.07
CFT2YLR115W FCP1Q03254 732 aa2.09□□□□□ -2.07
CFT2YLR115W YDL242WQ07746 117 aa2.09□□□□□ -2.07
CFT2YLR115W KGD2P19262 463 aaPredicted RBP2.08□□□□□ -2.08
CFT2YLR115W YCP4P25349 247 aaKnown RBP2.08□□□□□ -2.08
CFT2YLR115W YCR061WP25639 631 aa2.08□□□□□ -2.08
CFT2YLR115W MSH1P25846 959 aa2.08□□□□□ -2.08
CFT2YLR115W IMP2'P32351 346 aa2.08□□□□□ -2.08
CFT2YLR115W SLC1P33333 303 aa2.08□□□□□ -2.08
CFT2YLR115W KES1P35844 434 aaKnown RBP2.08□□□□□ -2.08
CFT2YLR115W YHL041WP38730 149 aa2.08□□□□□ -2.08
CFT2YLR115W SSP120P39931 234 aaKnown RBP2.08□□□□□ -2.08
CFT2YLR115W UBP7P40453 1071 aa2.08□□□□□ -2.08
CFT2YLR115W CFD1P40558 293 aa2.08□□□□□ -2.08
CFT2YLR115W COP1P53622 1201 aaKnown RBP2.08□□□□□ -2.08
CFT2YLR115W TGL2P54857 326 aa2.08□□□□□ -2.08
CFT2YLR115W CWC21Q03375 135 aaKnown RBP2.08□□□□□ -2.08
CFT2YLR115W YPR172WQ06608 200 aa2.08□□□□□ -2.08
CFT2YLR115W APC5Q08683 685 aa2.08□□□□□ -2.08
CFT2YLR115W HOS1Q12214 470 aa2.08□□□□□ -2.08
CFT2YLR115W SCM3Q12334 223 aa2.08□□□□□ -2.08
CFT2YLR115W ISA2Q12425 185 aa2.08□□□□□ -2.08
CFT2YLR115W POL1P13382 1468 aa2.08□□□□□ -2.08
CFT2YLR115W YPR089WO13585 888 aa2.08□□□□□ -2.08
CFT2YLR115W GAL4P04386 881 aa2.08□□□□□ -2.08
CFT2YLR115W GLK1P17709 500 aaKnown RBP2.08□□□□□ -2.08
CFT2YLR115W FTH1P38310 465 aa2.08□□□□□ -2.08
CFT2YLR115W RFC1P38630 861 aaKnown RBP2.08□□□□□ -2.08
CFT2YLR115W ACA1P39970 489 aa2.08□□□□□ -2.08
CFT2YLR115W PCI8P40512 444 aa2.08□□□□□ -2.08
CFT2YLR115W POL31P46957 487 aa2.08□□□□□ -2.08
CFT2YLR115W BNI5P53890 448 aaKnown RBP2.08□□□□□ -2.08
CFT2YLR115W ADA2Q02336 434 aa2.08□□□□□ -2.08
CFT2YLR115W SYF1Q04048 859 aaPredicted RBP2.08□□□□□ -2.08
CFT2YLR115W HIM1Q06674 414 aa2.08□□□□□ -2.08
CFT2YLR115W PSR1Q07800 427 aa2.08□□□□□ -2.08
CFT2YLR115W APA1P16550 321 aaKnown RBP2.07□□□□□ -2.08
CFT2YLR115W NOP4P37838 685 aaKnown RBP2.07□□□□□ -2.08
CFT2YLR115W UME6P39001 836 aa2.07□□□□□ -2.08
CFT2YLR115W JHD1P40034 492 aa2.07□□□□□ -2.08
CFT2YLR115W YIL092WP40497 633 aa2.07□□□□□ -2.08
CFT2YLR115W HST1P53685 503 aa2.07□□□□□ -2.08
CFT2YLR115W YNR061CP53747 219 aa2.07□□□□□ -2.08
CFT2YLR115W NCS2P53923 493 aaPredicted RBP2.07□□□□□ -2.08
CFT2YLR115W YNL058CP53947 316 aa2.07□□□□□ -2.08
CFT2YLR115W YPL071CQ02864 156 aa2.07□□□□□ -2.08
CFT2YLR115W SNU56Q03782 492 aaKnown RBP2.07□□□□□ -2.08
CFT2YLR115W ARA2Q04212 335 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms