RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	SEC3	P33332	1336 aa	Known RBP	3.49	□□□□□ -1.85
NDC80	YIL144W	RPC40	P07703	335 aa	Known RBP	3.48	□□□□□ -1.85
NDC80	YIL144W	PMS1	P14242	873 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	CKA1	P15790	372 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	PMA2	P19657	947 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	RRP43	P25359	394 aa	Predicted RBP	3.48	□□□□□ -1.85
NDC80	YIL144W	RFA2	P26754	273 aa	Known RBP	3.48	□□□□□ -1.85
NDC80	YIL144W	YJU2	P28320	278 aa	Predicted RBP	3.48	□□□□□ -1.85
NDC80	YIL144W	YMC1	P32331	307 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	CNS1	P33313	385 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	TEF4	P36008	412 aa	Known RBP	3.48	□□□□□ -1.85
NDC80	YIL144W	ERC1	P38767	581 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	PIH1	P38768	344 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	EXO1	P39875	702 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	YGR079W	P53249	370 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	ALF1	P53904	254 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	ZDS2	P54786	942 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	REG1	Q00816	1014 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	TIM44	Q01852	431 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	GTB1	Q04924	702 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	YML053C	Q04978	212 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	YLH47	Q06493	454 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	APC5	Q08683	685 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	MET17	P06106	444 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	TPK2	P06245	380 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	OLE1	P21147	510 aa	Known RBP	3.48	□□□□□ -1.85
NDC80	YIL144W	MNE1	P24720	663 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	IME2	P32581	645 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	TFB1	P32776	642 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	UME6	P39001	836 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	PCL7	P40186	285 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	YJL068C	P40363	299 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	OCA1	P50946	238 aa	Predicted RBP	3.48	□□□□□ -1.85
NDC80	YIL144W	CPR8	P53728	308 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	BNI5	P53890	448 aa	Known RBP	3.48	□□□□□ -1.85
NDC80	YIL144W	SWA2	Q06677	668 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	PNS1	Q12412	539 aa		3.48	□□□□□ -1.85
NDC80	YIL144W	COX1	P00401	534 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	PCT1	P13259	424 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	APN1	P22936	367 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	MDL1	P33310	695 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	TDP1	P38319	544 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	MUP3	P38734	546 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	RTT105	P40063	208 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	LYS14	P40971	790 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	GCD10	P41814	478 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	TDA10	P42938	290 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	VPS9	P54787	451 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	SEC5	P89102	971 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	WAR1	Q03631	944 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	NFI1	Q12216	726 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	AI5_ALPHA	Q9ZZX1	630 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	CHD1	P32657	1468 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	CET1	O13297	549 aa	Predicted RBP	3.47	□□□□□ -1.85
NDC80	YIL144W	RPL19A	P0CX82	189 aa	Known RBP	3.47	□□□□□ -1.85
NDC80	YIL144W	RPL19B	P0CX83	189 aa	Predicted RBP	3.47	□□□□□ -1.85
NDC80	YIL144W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.47	□□□□□ -1.85	not detected
NDC80	YIL144W	PDE1	P22434	369 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	ROX1	P25042	368 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	SGF29	P25554	259 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	LRE1	P25579	583 aa	Known RBP	3.47	□□□□□ -1.85
NDC80	YIL144W	RPT3	P33298	428 aa	Known RBP	3.47	□□□□□ -1.85
NDC80	YIL144W	RIB7	P33312	244 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	UBP7	P40453	1071 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	IST3	P40565	148 aa	Predicted RBP	3.47	□□□□□ -1.85
NDC80	YIL144W	CIR1	P42940	261 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	MSY1	P48527	492 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	PIL1	P53252	339 aa	Known RBP	3.47	□□□□□ -1.85
NDC80	YIL144W	ARP9	Q05123	467 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	PAR32	Q12515	295 aa	Known RBP	3.47	□□□□□ -1.85
NDC80	YIL144W	TAD3	Q9URQ3	322 aa		3.47	□□□□□ -1.85
NDC80	YIL144W	RPL7A	P05737	244 aa	Known RBP	3.46	□□□□□ -1.86
NDC80	YIL144W	SUI2	P20459	304 aa	Known RBP	3.46	□□□□□ -1.86
NDC80	YIL144W	HES1	P35843	434 aa		3.46	□□□□□ -1.86
NDC80	YIL144W	MTG2	P38860	518 aa		3.46	□□□□□ -1.86
NDC80	YIL144W	SAP1	P39955	897 aa	Known RBP	3.46	□□□□□ -1.86
NDC80	YIL144W	SKP2	P42843	763 aa		3.46	□□□□□ -1.86
NDC80	YIL144W	INN1	P53901	409 aa		3.46	□□□□□ -1.86
NDC80	YIL144W	YPR172W	Q06608	200 aa		3.46	□□□□□ -1.86
NDC80	YIL144W	IRC10	Q08118	586 aa		3.46	□□□□□ -1.86
NDC80	YIL144W	KEL3	Q08979	651 aa	Predicted RBP	3.46	□□□□□ -1.86
NDC80	YIL144W	SWT1	Q12104	458 aa		3.46	□□□□□ -1.86
NDC80	YIL144W	RPL7B	Q12213	244 aa	Known RBP	3.46	□□□□□ -1.86
NDC80	YIL144W	SFI1	Q12369	946 aa		3.46	□□□□□ -1.86
NDC80	YIL144W	ARG3	P05150	338 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	SRP54	P20424	541 aa	Known RBP	3.45	□□□□□ -1.86
NDC80	YIL144W	DAL80	P26343	269 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	FTH1	P38310	465 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	YJR061W	P40355	935 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	SEC28	P40509	296 aa	Known RBP	3.45	□□□□□ -1.86
NDC80	YIL144W	VPS4	P52917	437 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	PEX25	Q02969	394 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	PLM2	Q04383	521 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	ENT4	Q07872	247 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	CRT10	Q08226	957 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	ISA2	Q12425	185 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	YMR084W	A2P2R3	262 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	YLR302C	O13544	120 aa		3.45	□□□□□ -1.86
NDC80	YIL144W	SUI3	P09064	285 aa	Known RBP	3.45	□□□□□ -1.86
NDC80	YIL144W	RRP7	P25368	297 aa	Predicted RBP	3.45	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms