RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB4	YFL002C	ATG29	Q12092	213 aa		4.25	□□□□□ -1.73
SPB4	YFL002C	BAG7	Q12128	409 aa		4.25	□□□□□ -1.73
SPB4	YFL002C	YRF1-4	O13559	1382 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	REC107	P21651	314 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	URA7	P28274	579 aa	Known RBP	4.24	□□□□□ -1.73
SPB4	YFL002C	SYN8	P31377	255 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	PUP2	P32379	260 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	OTU2	P38747	307 aa	Known RBP	4.24	□□□□□ -1.73
SPB4	YFL002C	LCB2	P40970	561 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	THI6	P41835	540 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	ZIM17	P42844	174 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	BUL1	P48524	976 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	MSE1	P48525	536 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	YGR151C	P53287	111 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	DIP5	P53388	608 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	BUD17	P53727	317 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	BUD22	Q04347	519 aa	Known RBP	4.24	□□□□□ -1.73
SPB4	YFL002C	RQC1	Q05468	723 aa	Known RBP	4.24	□□□□□ -1.73
SPB4	YFL002C	MRD1	Q06106	887 aa	Known RBP	4.24	□□□□□ -1.73
SPB4	YFL002C	CRN1	Q06440	651 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	YPL216W	Q08964	1102 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	AVL9	Q12500	764 aa		4.24	□□□□□ -1.73
SPB4	YFL002C	ARD1	P07347	238 aa	Predicted RBP	4.23	□□□□□ -1.73
SPB4	YFL002C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
SPB4	YFL002C	STE11	P23561	717 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	YSP3	P25036	478 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	RRP7	P25368	297 aa	Predicted RBP	4.23	□□□□□ -1.73
SPB4	YFL002C	CNE1	P27825	502 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	BRF1	P29056	596 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	APL3	P38065	1025 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	YPT10	P38146	199 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	ERC1	P38767	581 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	FUN12	P39730	1002 aa	Known RBP	4.23	□□□□□ -1.73
SPB4	YFL002C	CTK2	P46962	323 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	MSY1	P48527	492 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	DCP2	P53550	970 aa	Known RBP	4.23	□□□□□ -1.73
SPB4	YFL002C	YAT1	P80235	687 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	GYL1	Q04322	720 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	UFO1	Q04511	668 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	TGS1	Q12052	315 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	USV1	Q12132	391 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	TRM13	Q12383	476 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	ISN1	Q99312	450 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	YPK1	P12688	680 aa	Known RBP	4.23	□□□□□ -1.73
SPB4	YFL002C	PAP1	P29468	568 aa	Known RBP	4.23	□□□□□ -1.73
SPB4	YFL002C	MGM1	P32266	881 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	RPN2	P32565	945 aa	Known RBP	4.23	□□□□□ -1.73
SPB4	YFL002C	HES1	P35843	434 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	OMA1	P36163	345 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	POP2	P39008	433 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	MAM1	P40065	302 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	SWP82	P43554	623 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	YJL055W	P47044	245 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	NPA3	P47122	385 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	ECL1	P48235	211 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	VID30	P53076	958 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	YIP4	P53093	235 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	YDR239C	Q03780	787 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	TMA10	Q06177	86 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	YDL242W	Q07746	117 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	RKI1	Q12189	258 aa		4.23	□□□□□ -1.73
SPB4	YFL002C	COX1	P00401	534 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	GAL80	P04387	435 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	AMD2	P22580	549 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	CPR2	P23285	205 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	VMA16	P23968	213 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	SIP1	P32578	815 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	LIP5	P32875	414 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	LOT5	P34234	306 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	CMC1	P36064	111 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	RPF2	P36160	344 aa	Known RBP	4.22	□□□□□ -1.73
SPB4	YFL002C	GPI8	P49018	411 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	CTR1	P49573	406 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	TWF1	P53250	332 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	ROY1	Q04847	553 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	SWA2	Q06677	668 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	LUC7	Q07508	261 aa	Predicted RBP	4.22	□□□□□ -1.73
SPB4	YFL002C	CUE5	Q08412	411 aa	Known RBP	4.22	□□□□□ -1.73
SPB4	YFL002C	AI5_ALPHA	Q9ZZX1	630 aa		4.22	□□□□□ -1.73
SPB4	YFL002C	AAC1	P04710	309 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	VMA2	P16140	517 aa	Known RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	EST1	P17214	699 aa	Predicted RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	SRP54	P20424	541 aa	Known RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	MRE11	P32829	692 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	WBP1	P33767	430 aa	Known RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	PMT1	P33775	817 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	TSA1	P34760	196 aa	Known RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	NTR2	P36118	322 aa	Predicted RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	AAP1	P37898	856 aa	Known RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	PET130	P47065	347 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	TCB2	P48231	1178 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	MNN10	P50108	393 aa	Known RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	NMA2	P53204	395 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	YNL092W	P53934	400 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	BOP3	P53958	396 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	RPA49	Q01080	415 aa	Predicted RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	PRP42	Q03776	544 aa	Known RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	ARX1	Q03862	593 aa	Known RBP	4.21	□□□□□ -1.74
SPB4	YFL002C	FMP45	Q07651	309 aa		4.21	□□□□□ -1.74
SPB4	YFL002C	FMP40	Q08968	688 aa	Predicted RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms