RNA–Protein interactions for RNA: YDR358W

GGA1, Transcript of Golgi-localized protein with homology to gamma-adaptin, yeast

Gene GGA1, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GGA1	YDR358W	STR3	P53101	465 aa	Known RBP	4.77	□□□□□ -1.65
GGA1	YDR358W	LCL3	P53153	274 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	SPC98	P53540	846 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	EOS1	P53938	366 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	PRP3	Q03338	469 aa	Predicted RBP	4.77	□□□□□ -1.65
GGA1	YDR358W	RQC1	Q05468	723 aa	Known RBP	4.77	□□□□□ -1.65
GGA1	YDR358W	RGC1	Q06108	1083 aa	Known RBP	4.77	□□□□□ -1.65
GGA1	YDR358W	BUD7	Q08754	746 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	PRS5	Q12265	496 aa	Known RBP	4.77	□□□□□ -1.65
GGA1	YDR358W	HSP42	Q12329	375 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	AVL9	Q12500	764 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	YKL033W-A	Q86ZR7	236 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	YLR358C	O13565	187 aa		4.76	□□□□□ -1.65
GGA1	YDR358W	APE1	P14904	514 aa		4.76	□□□□□ -1.65
GGA1	YDR358W	FUB1	P25659	250 aa		4.76	□□□□□ -1.65
GGA1	YDR358W	SYN8	P31377	255 aa		4.76	□□□□□ -1.65
GGA1	YDR358W	SWH1	P35845	1188 aa		4.76	□□□□□ -1.65
GGA1	YDR358W	AFG3	P39925	761 aa		4.76	□□□□□ -1.65
GGA1	YDR358W	ELO3	P40319	345 aa		4.76	□□□□□ -1.65
GGA1	YDR358W	SEC24	P40482	926 aa	Known RBP	4.76	□□□□□ -1.65
GGA1	YDR358W	IRC24	P40580	263 aa		4.76	□□□□□ -1.65
GGA1	YDR358W	MSE1	P48525	536 aa		4.76	□□□□□ -1.65
GGA1	YDR358W	PAN2	P53010	1115 aa	Predicted RBP	4.76	□□□□□ -1.65
GGA1	YDR358W	YGL036W	P53185	909 aa	Predicted RBP	4.76	□□□□□ -1.65
GGA1	YDR358W	BNI5	P53890	448 aa	Known RBP	4.76	□□□□□ -1.65
GGA1	YDR358W	RIA1	P53893	1110 aa		4.76	□□□□□ -1.65
GGA1	YDR358W	YSH1	Q06224	779 aa	Predicted RBP	4.76	□□□□□ -1.65
GGA1	YDR358W	CUE5	Q08412	411 aa	Known RBP	4.76	□□□□□ -1.65
GGA1	YDR358W	BAG7	Q12128	409 aa		4.76	□□□□□ -1.65
GGA1	YDR358W	SKS1	Q12505	502 aa		4.76	□□□□□ -1.65
GGA1	YDR358W	KGD2	P19262	463 aa	Predicted RBP	4.75	□□□□□ -1.65
GGA1	YDR358W	CPR2	P23285	205 aa		4.75	□□□□□ -1.65
GGA1	YDR358W	VMA16	P23968	213 aa		4.75	□□□□□ -1.65
GGA1	YDR358W	URA7	P28274	579 aa	Known RBP	4.75	□□□□□ -1.65
GGA1	YDR358W	CDC5	P32562	705 aa		4.75	□□□□□ -1.65
GGA1	YDR358W	CMC1	P36064	111 aa		4.75	□□□□□ -1.65
GGA1	YDR358W	CCL1	P37366	393 aa		4.75	□□□□□ -1.65
GGA1	YDR358W	CCT6	P39079	546 aa		4.75	□□□□□ -1.65
GGA1	YDR358W	FUN12	P39730	1002 aa	Known RBP	4.75	□□□□□ -1.65
GGA1	YDR358W	MEP1	P40260	492 aa		4.75	□□□□□ -1.65
GGA1	YDR358W	SAE2	P46946	345 aa		4.75	□□□□□ -1.65
GGA1	YDR358W	BUL1	P48524	976 aa		4.75	□□□□□ -1.65
GGA1	YDR358W	LYS4	P49367	693 aa	Predicted RBP	4.75	□□□□□ -1.65
GGA1	YDR358W	TWF1	P53250	332 aa		4.75	□□□□□ -1.65
GGA1	YDR358W	DCP2	P53550	970 aa	Known RBP	4.75	□□□□□ -1.65
GGA1	YDR358W	DAK1	P54838	584 aa	Known RBP	4.75	□□□□□ -1.65
GGA1	YDR358W	MFM1	Q02783	413 aa		4.75	□□□□□ -1.65
GGA1	YDR358W	PRP42	Q03776	544 aa	Known RBP	4.75	□□□□□ -1.65
GGA1	YDR358W	YDR239C	Q03780	787 aa		4.75	□□□□□ -1.65
GGA1	YDR358W	MRD1	Q06106	887 aa	Known RBP	4.75	□□□□□ -1.65
GGA1	YDR358W	YPL272C	Q08984	517 aa		4.75	□□□□□ -1.65
GGA1	YDR358W	SIR3	P06701	978 aa		4.74	□□□□□ -1.65
GGA1	YDR358W	RRP7	P25368	297 aa	Predicted RBP	4.74	□□□□□ -1.65
GGA1	YDR358W	CTS1	P29029	562 aa		4.74	□□□□□ -1.65
GGA1	YDR358W	ELF1	P36053	145 aa		4.74	□□□□□ -1.65
GGA1	YDR358W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
GGA1	YDR358W	RPS0B	P46654	252 aa	Known RBP	4.74	□□□□□ -1.65
GGA1	YDR358W	CTR1	P49573	406 aa		4.74	□□□□□ -1.65
GGA1	YDR358W	YGR079W	P53249	370 aa		4.74	□□□□□ -1.65
GGA1	YDR358W	BOP3	P53958	396 aa		4.74	□□□□□ -1.65
GGA1	YDR358W	SEC5	P89102	971 aa		4.74	□□□□□ -1.65
GGA1	YDR358W	CTF4	Q01454	927 aa		4.74	□□□□□ -1.65
GGA1	YDR358W	CRN1	Q06440	651 aa		4.74	□□□□□ -1.65
GGA1	YDR358W	GPN2	Q08726	347 aa	Predicted RBP	4.74	□□□□□ -1.65
GGA1	YDR358W	YPL216W	Q08964	1102 aa		4.74	□□□□□ -1.65
GGA1	YDR358W	TGS1	Q12052	315 aa		4.74	□□□□□ -1.65
GGA1	YDR358W	AFI1	Q99222	893 aa		4.74	□□□□□ -1.65
GGA1	YDR358W	ARD1	P07347	238 aa	Predicted RBP	4.73	□□□□□ -1.65
GGA1	YDR358W	RFA2	P26754	273 aa	Known RBP	4.73	□□□□□ -1.65
GGA1	YDR358W	SIP1	P32578	815 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	TFB1	P32776	642 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	HIS7	P33734	552 aa	Known RBP	4.73	□□□□□ -1.65
GGA1	YDR358W	LOT5	P34234	306 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	PHO11	P35842	467 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	PHO12	P38693	467 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	ARO9	P38840	513 aa	Predicted RBP	4.73	□□□□□ -1.65
GGA1	YDR358W	CTK2	P46962	323 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	MNN10	P50108	393 aa	Known RBP	4.73	□□□□□ -1.65
GGA1	YDR358W	MCM6	P53091	1017 aa	Known RBP	4.73	□□□□□ -1.65
GGA1	YDR358W	CUL3	P53202	744 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	FHN1	P53279	174 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	YAT1	P80235	687 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	MAK10	Q02197	733 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	ARG7	Q04728	441 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	ROY1	Q04847	553 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	MRI1	Q06489	411 aa	Known RBP	4.73	□□□□□ -1.65
GGA1	YDR358W	YDL086W	Q07505	273 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	FMP40	Q08968	688 aa	Predicted RBP	4.73	□□□□□ -1.65
GGA1	YDR358W	SPE3	Q12074	293 aa	Known RBP	4.73	□□□□□ -1.65
GGA1	YDR358W	NFI1	Q12216	726 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	FRE6	Q12473	712 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	GAL80	P04387	435 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	RPF2	P36160	344 aa	Known RBP	4.73	□□□□□ -1.65
GGA1	YDR358W	APL3	P38065	1025 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	FTH1	P38310	465 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	FMP52	P40008	231 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	UBX6	P47049	396 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	RSF1	Q05043	376 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	VTA1	Q06263	330 aa		4.73	□□□□□ -1.65
GGA1	YDR358W	LUC7	Q07508	261 aa	Predicted RBP	4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms