RNA–Protein interactions for RNA: YDR358W

GGA1, Transcript of Golgi-localized protein with homology to gamma-adaptin, yeastyeast

Gene GGA1, Length 1,674 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA1YDR358W MTC1P47018 478 aaKnown RBP12.31□□□□□ -0.44
GGA1YDR358W DRS1P32892 752 aaKnown RBP12.27□□□□□ -0.45
GGA1YDR358W BFR2Q06631 534 aaKnown RBP10.58□□□□□ -0.72
GGA1YDR358W DIP2Q12220 943 aaPredicted RBP10.47□□□□□ -0.73
GGA1YDR358W AVT3P36062 692 aa10.39□□□□□ -0.75
GGA1YDR358W TFA1P36100 482 aa10.06□□□□□ -0.8
GGA1YDR358W FAP1P53971 965 aa10.04□□□□□ -0.8
GGA1YDR358W ISW2Q08773 1120 aa9.94□□□□□ -0.82
GGA1YDR358W PRI1P10363 409 aa9.92□□□□□ -0.82
GGA1YDR358W RSE1Q04693 1361 aaKnown RBP9.87□□□□□ -0.83
GGA1YDR358W RPG1P38249 964 aaKnown RBP9.86□□□□□ -0.83
GGA1YDR358W AAD16Q02895 342 aa9.72□□□□□ -0.85
GGA1YDR358W RPL17AP05740 184 aaKnown RBP9.52□□□□□ -0.89
GGA1YDR358W RPL17BP46990 184 aaKnown RBP9.52□□□□□ -0.89
GGA1YDR358W RQC2Q12532 1038 aaKnown RBP9.46□□□□□ -0.89
GGA1YDR358W PRY3P47033 881 aa9.44□□□□□ -0.9
GGA1YDR358W TSR3Q12094 313 aaKnown RBP9.4□□□□□ -0.9
GGA1YDR358W REB1P21538 810 aa9.35□□□□□ -0.91
GGA1YDR358W SPT21P35209 758 aa9.26□□□□□ -0.93
GGA1YDR358W YCK3P39962 524 aa9.12□□□□□ -0.95
GGA1YDR358W RIM101P33400 625 aa9.1□□□□□ -0.95
GGA1YDR358W MRPL32P25348 183 aa8.97□□□□□ -0.97
GGA1YDR358W YKR023WP36119 530 aaKnown RBP8.96□□□□□ -0.98
GGA1YDR358W HAA1Q12753 694 aaKnown RBP8.9□□□□□ -0.98
GGA1YDR358W OXP1P28273 1286 aa8.84□□□□□ -0.99
GGA1YDR358W CDC27P38042 758 aa8.78□□□□□ -1
GGA1YDR358W TFC8Q12308 588 aa8.75□□□□□ -1.01
GGA1YDR358W HOP09932 586 aa8.73□□□□□ -1.01
GGA1YDR358W DCD1P06773 312 aa8.69□□□□□ -1.02
GGA1YDR358W PTP3P40048 928 aa8.69□□□□□ -1.02
GGA1YDR358W TAF7Q05021 590 aa8.66□□□□□ -1.02
GGA1YDR358W SSP1P38871 571 aa8.62□□□□□ -1.03
GGA1YDR358W YAH1Q12184 172 aaKnown RBP8.6□□□□□ -1.03
GGA1YDR358W DMA1P38823 416 aa8.57□□□□□ -1.04
GGA1YDR358W YIL055CP40523 627 aaKnown RBP8.56□□□□□ -1.04
GGA1YDR358W YLR271WQ06152 274 aa8.56□□□□□ -1.04
GGA1YDR358W RSM7P47150 247 aa8.5□□□□□ -1.05
GGA1YDR358W BCH2P36122 765 aa8.49□□□□□ -1.05
GGA1YDR358W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
GGA1YDR358W YGL015CP33199 130 aa8.37□□□□□ -1.07
GGA1YDR358W MAP2P38174 421 aaKnown RBP8.37□□□□□ -1.07
GGA1YDR358W AI2P03876 854 aa8.37□□□□□ -1.07
GGA1YDR358W UBP10P53874 792 aaPredicted RBP8.36□□□□□ -1.07
GGA1YDR358W PSD2P53037 1138 aaKnown RBP8.35□□□□□ -1.07
GGA1YDR358W SCY1P53009 804 aa8.34□□□□□ -1.08
GGA1YDR358W EPS1P40557 701 aa8.33□□□□□ -1.08
GGA1YDR358W MGA2P40578 1113 aa8.32□□□□□ -1.08
GGA1YDR358W CST9Q06032 482 aa8.3□□□□□ -1.08
GGA1YDR358W LEO1P38439 464 aa8.29□□□□□ -1.08
GGA1YDR358W BDF1P35817 686 aa8.28□□□□□ -1.08
GGA1YDR358W BBC1P47068 1157 aa8.25□□□□□ -1.09
GGA1YDR358W SLX5P32828 619 aaKnown RBP8.15□□□□□ -1.1
GGA1YDR358W MRM1P25270 412 aa8.11□□□□□ -1.11
GGA1YDR358W RCR1P38212 213 aa8.05□□□□□ -1.12
GGA1YDR358W RAM2P29703 316 aa8.01□□□□□ -1.13
GGA1YDR358W BUD31P25337 157 aaPredicted RBP7.99□□□□□ -1.13
GGA1YDR358W RTG3P38165 486 aa7.97□□□□□ -1.13
GGA1YDR358W VPS29P38759 282 aa7.96□□□□□ -1.13
GGA1YDR358W TIF4632P39936 914 aaKnown RBP7.95□□□□□ -1.14
GGA1YDR358W TGL3P40308 642 aa7.95□□□□□ -1.14
GGA1YDR358W LEU3P08638 886 aa7.94□□□□□ -1.14
GGA1YDR358W NSR1P27476 414 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
GGA1YDR358W SAS10Q12136 610 aaPredicted RBP7.89□□□□□ -1.15
GGA1YDR358W STS1P38637 319 aa7.86□□□□□ -1.15
GGA1YDR358W MAK11P20484 414 aaKnown RBP7.84□□□□□ -1.15
GGA1YDR358W YMR1P47147 688 aaKnown RBP RIP-Chip data7.84□□□□□ -1.15not detected
GGA1YDR358W YOR238WQ08634 303 aa7.8□□□□□ -1.16
GGA1YDR358W DBP1P24784 617 aaKnown RBP7.79□□□□□ -1.16
GGA1YDR358W YAP5P40574 245 aa7.79□□□□□ -1.16
GGA1YDR358W YFR006WP43590 535 aa7.79□□□□□ -1.16
GGA1YDR358W MST1P07236 462 aa7.77□□□□□ -1.17
GGA1YDR358W SET1P38827 1080 aaKnown RBP7.76□□□□□ -1.17
GGA1YDR358W PIB1Q06651 286 aa7.74□□□□□ -1.17
GGA1YDR358W COQ8P27697 501 aa7.73□□□□□ -1.17
GGA1YDR358W EDS1P38073 919 aa7.73□□□□□ -1.17
GGA1YDR358W YPR148CQ06523 435 aa7.7□□□□□ -1.18
GGA1YDR358W RPN1P38764 993 aaKnown RBP7.69□□□□□ -1.18
GGA1YDR358W VMA1P17255 1071 aaKnown RBP7.67□□□□□ -1.18
GGA1YDR358W MIF2P35201 549 aa7.66□□□□□ -1.18
GGA1YDR358W NOP53Q12080 455 aaKnown RBP7.64□□□□□ -1.19
GGA1YDR358W PTC3P34221 468 aaKnown RBP7.62□□□□□ -1.19
GGA1YDR358W SAM3Q08986 587 aa7.61□□□□□ -1.19
GGA1YDR358W DMA2P53924 522 aa7.6□□□□□ -1.19
GGA1YDR358W IFH1P39520 1085 aa7.59□□□□□ -1.19
GGA1YDR358W VPS70P47161 811 aa7.59□□□□□ -1.19
GGA1YDR358W GTT3P39996 337 aa7.54□□□□□ -1.2
GGA1YDR358W CKB1P43639 278 aa7.51□□□□□ -1.21
GGA1YDR358W YOL036WQ08206 761 aa7.51□□□□□ -1.21
GGA1YDR358W SPB4P25808 606 aaPredicted RBP7.5□□□□□ -1.21
GGA1YDR358W GRE2Q12068 342 aaKnown RBP7.5□□□□□ -1.21
GGA1YDR358W RLF2Q12495 606 aa7.5□□□□□ -1.21
GGA1YDR358W GYP5Q12344 894 aa7.49□□□□□ -1.21
GGA1YDR358W GUT1P32190 709 aa7.48□□□□□ -1.21
GGA1YDR358W SOL3P38858 249 aa7.47□□□□□ -1.21
GGA1YDR358W YBL029C-AQ3E756 94 aa7.47□□□□□ -1.21
GGA1YDR358W SET4P42948 560 aa7.47□□□□□ -1.21
GGA1YDR358W ATH1P48016 1211 aa7.47□□□□□ -1.21
GGA1YDR358W NST1P53935 1240 aa7.46□□□□□ -1.22
GGA1YDR358W WSC3Q12215 556 aa7.46□□□□□ -1.22
GGA1YDR358W VNX1P42839 908 aa7.44□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms