RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C GPP2P40106 250 aaKnown RBP1.79□□□□□ -2.12
VPS54YDR027C QRI7P43122 407 aa1.79□□□□□ -2.12
VPS54YDR027C DUG1P43616 481 aaKnown RBP1.79□□□□□ -2.12
VPS54YDR027C CRF1Q04930 467 aa1.79□□□□□ -2.12
VPS54YDR027C SLX4Q12098 748 aa1.79□□□□□ -2.12
VPS54YDR027C PIF1P07271 859 aa1.78□□□□□ -2.12
VPS54YDR027C SWC3P31376 625 aa1.78□□□□□ -2.12
VPS54YDR027C DHH1P39517 506 aaKnown RBP1.78□□□□□ -2.12
VPS54YDR027C YND1P40009 630 aa1.78□□□□□ -2.12
VPS54YDR027C SPC105P53148 917 aa1.78□□□□□ -2.12
VPS54YDR027C HOL1P53389 586 aa1.78□□□□□ -2.12
VPS54YDR027C YNR071CP53757 342 aa1.78□□□□□ -2.12
VPS54YDR027C LEA1Q08963 238 aaPredicted RBP1.78□□□□□ -2.12
VPS54YDR027C RTK1Q12100 620 aaPredicted RBP1.78□□□□□ -2.12
VPS54YDR027C PRP45P28004 379 aaPredicted RBP1.78□□□□□ -2.12
VPS54YDR027C PRE2P30656 287 aaKnown RBP1.78□□□□□ -2.12
VPS54YDR027C DED81P38707 554 aaKnown RBP1.78□□□□□ -2.12
VPS54YDR027C STL1P39932 569 aa1.78□□□□□ -2.12
VPS54YDR027C TPA1P40032 644 aaKnown RBP1.78□□□□□ -2.12
VPS54YDR027C VFA1P40080 203 aa1.78□□□□□ -2.12
VPS54YDR027C IZH1Q03419 316 aa1.78□□□□□ -2.12
VPS54YDR027C TAH18Q12181 623 aa1.78□□□□□ -2.12
VPS54YDR027C STH1P32597 1359 aa1.78□□□□□ -2.13
VPS54YDR027C TEL1P38110 2787 aa1.77□□□□□ -2.13
VPS54YDR027C SST2P11972 698 aaKnown RBP1.77□□□□□ -2.13
VPS54YDR027C YEF3P16521 1044 aaKnown RBP1.77□□□□□ -2.13
VPS54YDR027C MNN2P38069 597 aa1.77□□□□□ -2.13
VPS54YDR027C UBP7P40453 1071 aa1.77□□□□□ -2.13
VPS54YDR027C MAD2P40958 196 aa1.77□□□□□ -2.13
VPS54YDR027C UBP8P50102 471 aa1.77□□□□□ -2.13
VPS54YDR027C ECM38Q05902 660 aaPredicted RBP1.77□□□□□ -2.13
VPS54YDR027C TAO3P40468 2376 aa1.77□□□□□ -2.13
VPS54YDR027C CAT8P39113 1433 aa1.77□□□□□ -2.13
VPS54YDR027C HEM12P32347 362 aaPredicted RBP1.77□□□□□ -2.13
VPS54YDR027C SWE1P32944 819 aa1.77□□□□□ -2.13
VPS54YDR027C OCT1P35999 772 aa1.77□□□□□ -2.13
VPS54YDR027C FUI1P38196 639 aa1.77□□□□□ -2.13
VPS54YDR027C ERC1P38767 581 aa1.77□□□□□ -2.13
VPS54YDR027C CRZ1P53968 678 aa1.77□□□□□ -2.13
VPS54YDR027C MET14Q02196 202 aa1.77□□□□□ -2.13
VPS54YDR027C TRS31Q03337 283 aa1.77□□□□□ -2.13
VPS54YDR027C PHM6Q05637 104 aa1.77□□□□□ -2.13
VPS54YDR027C ECI1Q05871 280 aa1.77□□□□□ -2.13
VPS54YDR027C POS5Q06892 414 aa1.77□□□□□ -2.13
VPS54YDR027C DIN7Q12086 430 aa1.77□□□□□ -2.13
VPS54YDR027C YLR112WQ12130 139 aa1.77□□□□□ -2.13
VPS54YDR027C NYV1Q12255 253 aa1.77□□□□□ -2.13
VPS54YDR027C COX11P19516 300 aaKnown RBP1.76□□□□□ -2.13
VPS54YDR027C NPR2P39923 615 aa1.76□□□□□ -2.13
VPS54YDR027C SLD3P53135 668 aa1.76□□□□□ -2.13
VPS54YDR027C YGL036WP53185 909 aaPredicted RBP1.76□□□□□ -2.13
VPS54YDR027C MCH4Q08268 501 aa1.76□□□□□ -2.13
VPS54YDR027C KAR1P11927 433 aa1.76□□□□□ -2.13
VPS54YDR027C PDE1P22434 369 aa1.76□□□□□ -2.13
VPS54YDR027C YLR278CQ05854 1341 aa1.76□□□□□ -2.13
VPS54YDR027C ATP4P05626 244 aa1.75□□□□□ -2.13
VPS54YDR027C PRP16P15938 1071 aaPredicted RBP1.75□□□□□ -2.13
VPS54YDR027C RPS7AP26786 190 aaKnown RBP1.75□□□□□ -2.13
VPS54YDR027C PSP1P50896 841 aaKnown RBP1.75□□□□□ -2.13
VPS54YDR027C YPR003CP53394 754 aa1.75□□□□□ -2.13
VPS54YDR027C TRI1Q05024 226 aa1.75□□□□□ -2.13
VPS54YDR027C BUD21Q08492 214 aaPredicted RBP1.75□□□□□ -2.13
VPS54YDR027C GAL1P04385 528 aa1.75□□□□□ -2.13
VPS54YDR027C APA1P16550 321 aaKnown RBP1.75□□□□□ -2.13
VPS54YDR027C VPS24P36095 224 aaKnown RBP1.75□□□□□ -2.13
VPS54YDR027C VPS41P38959 992 aa1.75□□□□□ -2.13
VPS54YDR027C ARB1P40024 610 aaKnown RBP1.75□□□□□ -2.13
VPS54YDR027C EMP65P40085 556 aa1.75□□□□□ -2.13
VPS54YDR027C ASG1P40467 964 aa1.75□□□□□ -2.13
VPS54YDR027C CDC1P40986 491 aa1.75□□□□□ -2.13
VPS54YDR027C FCP1Q03254 732 aa1.75□□□□□ -2.13
VPS54YDR027C SWF1Q04629 336 aa1.75□□□□□ -2.13
VPS54YDR027C PSF3Q12146 194 aa1.75□□□□□ -2.13
VPS54YDR027C DBP10Q12389 995 aaKnown RBP1.75□□□□□ -2.13
VPS54YDR027C TOR2P32600 2474 aaKnown RBP1.75□□□□□ -2.13
VPS54YDR027C PGI1P12709 554 aaKnown RBP1.74□□□□□ -2.13
VPS54YDR027C CDC23P16522 626 aa1.74□□□□□ -2.13
VPS54YDR027C LAC1P28496 418 aa1.74□□□□□ -2.13
VPS54YDR027C NPA3P47122 385 aa1.74□□□□□ -2.13
VPS54YDR027C YRB30P53107 440 aaPredicted RBP1.74□□□□□ -2.13
VPS54YDR027C YMR254CQ04838 102 aa1.74□□□□□ -2.13
VPS54YDR027C ARP9Q05123 467 aa1.74□□□□□ -2.13
VPS54YDR027C PIG1Q06216 648 aa1.74□□□□□ -2.13
VPS54YDR027C PEX15Q08215 383 aa1.74□□□□□ -2.13
VPS54YDR027C SNF2P22082 1703 aa1.74□□□□□ -2.13
VPS54YDR027C RRP5Q05022 1729 aaKnown RBP1.74□□□□□ -2.13
VPS54YDR027C IES5P40060 125 aa1.74□□□□□ -2.13
VPS54YDR027C ROK1P45818 564 aaPredicted RBP1.74□□□□□ -2.13
VPS54YDR027C UBX6P47049 396 aa1.74□□□□□ -2.13
VPS54YDR027C EAF6P47128 113 aa1.74□□□□□ -2.13
VPS54YDR027C EAF7P53911 425 aaKnown RBP1.74□□□□□ -2.13
VPS54YDR027C ESBP6P53918 673 aa1.74□□□□□ -2.13
VPS54YDR027C UBX4P54730 416 aa1.74□□□□□ -2.13
VPS54YDR027C CAC2Q04199 468 aa1.74□□□□□ -2.13
VPS54YDR027C SMA2Q04658 369 aa1.74□□□□□ -2.13
VPS54YDR027C YBR255C-AQ3E776 120 aa1.74□□□□□ -2.13
VPS54YDR027C YCR006CP25350 157 aa1.73□□□□□ -2.13
VPS54YDR027C PWP2P25635 923 aaKnown RBP1.73□□□□□ -2.13
VPS54YDR027C PTP2P29461 750 aa1.73□□□□□ -2.13
VPS54YDR027C TAF5P38129 798 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms