RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C CUZ1P53899 274 aa4.47□□□□□ -1.69
CDC9YDL164C DAK1P54838 584 aaKnown RBP4.47□□□□□ -1.69
CDC9YDL164C PPN1Q04119 674 aa4.47□□□□□ -1.69
CDC9YDL164C YLR346CQ06139 101 aa4.47□□□□□ -1.69
CDC9YDL164C THI22Q06490 572 aa4.47□□□□□ -1.69
CDC9YDL164C HOS1Q12214 470 aa4.47□□□□□ -1.69
CDC9YDL164C UBX3Q12229 455 aa4.47□□□□□ -1.69
CDC9YDL164C YOR019WQ99248 730 aa4.47□□□□□ -1.69
CDC9YDL164C ATP2P00830 511 aaKnown RBP4.46□□□□□ -1.7
CDC9YDL164C TUP1P16649 713 aa4.46□□□□□ -1.7
CDC9YDL164C PHO91P27514 894 aa4.46□□□□□ -1.7
CDC9YDL164C PMT1P33775 817 aa4.46□□□□□ -1.7
CDC9YDL164C MRPL40P36534 297 aa4.46□□□□□ -1.7
CDC9YDL164C MNN2P38069 597 aa4.46□□□□□ -1.7
CDC9YDL164C APN2P38207 520 aa4.46□□□□□ -1.7
CDC9YDL164C MMS4P38257 691 aa4.46□□□□□ -1.7
CDC9YDL164C YHR112CP38716 378 aa4.46□□□□□ -1.7
CDC9YDL164C MTG2P38860 518 aa4.46□□□□□ -1.7
CDC9YDL164C CEM1P39525 442 aa4.46□□□□□ -1.7
CDC9YDL164C PFK26P40433 827 aaKnown RBP4.46□□□□□ -1.7
CDC9YDL164C TEL2P53038 688 aa4.46□□□□□ -1.7
CDC9YDL164C WHI4Q07655 649 aaKnown RBP4.46□□□□□ -1.7
CDC9YDL164C SWT1Q12104 458 aa4.46□□□□□ -1.7
CDC9YDL164C RPS9AO13516 197 aaKnown RBP4.46□□□□□ -1.7
CDC9YDL164C TUB3P09734 445 aaKnown RBP4.46□□□□□ -1.7
CDC9YDL164C CLB3P24870 427 aa4.46□□□□□ -1.7
CDC9YDL164C YJU2P28320 278 aaPredicted RBP4.46□□□□□ -1.7
CDC9YDL164C SFA1P32771 386 aa4.46□□□□□ -1.7
CDC9YDL164C WBP1P33767 430 aaKnown RBP4.46□□□□□ -1.7
CDC9YDL164C VID24P38263 362 aa4.46□□□□□ -1.7
CDC9YDL164C PEX32P38292 413 aa4.46□□□□□ -1.7
CDC9YDL164C YHR054CP38780 354 aa4.46□□□□□ -1.7
CDC9YDL164C CTF8P38877 133 aa4.46□□□□□ -1.7
CDC9YDL164C SLN1P39928 1220 aaPredicted RBP4.46□□□□□ -1.7
CDC9YDL164C PFA3P42836 336 aa4.46□□□□□ -1.7
CDC9YDL164C LYS5P50113 272 aa4.46□□□□□ -1.7
CDC9YDL164C YBP2P53169 641 aa4.46□□□□□ -1.7
CDC9YDL164C ARG5,6Q01217 863 aa4.46□□□□□ -1.7
CDC9YDL164C SLU7Q02775 382 aaKnown RBP4.46□□□□□ -1.7
CDC9YDL164C TPP1Q03796 238 aa4.46□□□□□ -1.7
CDC9YDL164C ARR3Q06598 404 aa4.46□□□□□ -1.7
CDC9YDL164C GPN2Q08726 347 aaPredicted RBP4.46□□□□□ -1.7
CDC9YDL164C RIM20Q12033 661 aa4.46□□□□□ -1.7
CDC9YDL164C TY1A-BLQ12266 440 aa4.46□□□□□ -1.7
CDC9YDL164C AVL9Q12500 764 aa4.46□□□□□ -1.7
CDC9YDL164C PNO1Q99216 274 aaKnown RBP4.46□□□□□ -1.7
CDC9YDL164C SKI3P17883 1432 aaKnown RBP4.45□□□□□ -1.7
CDC9YDL164C TPK2P06245 380 aa4.45□□□□□ -1.7
CDC9YDL164C PET122P10355 254 aa4.45□□□□□ -1.7
CDC9YDL164C PYC1P11154 1178 aaKnown RBP4.45□□□□□ -1.7
CDC9YDL164C BUD5P25300 642 aaPredicted RBP4.45□□□□□ -1.7
CDC9YDL164C RPC82P32349 654 aa4.45□□□□□ -1.7
CDC9YDL164C HXT3P32466 567 aaKnown RBP4.45□□□□□ -1.7
CDC9YDL164C UBP11P36026 717 aa4.45□□□□□ -1.7
CDC9YDL164C MRPL36P36531 177 aa4.45□□□□□ -1.7
CDC9YDL164C GLY1P37303 387 aaKnown RBP4.45□□□□□ -1.7
CDC9YDL164C VFA1P40080 203 aa4.45□□□□□ -1.7
CDC9YDL164C SMC3P47037 1230 aa4.45□□□□□ -1.7
CDC9YDL164C MLC1P53141 149 aa4.45□□□□□ -1.7
CDC9YDL164C OGG1P53397 376 aaPredicted RBP4.45□□□□□ -1.7
CDC9YDL164C MGR3Q04472 501 aa4.45□□□□□ -1.7
CDC9YDL164C YMR074CQ04773 145 aa4.45□□□□□ -1.7
CDC9YDL164C LUC7Q07508 261 aaPredicted RBP4.45□□□□□ -1.7
CDC9YDL164C YOR223WQ12015 292 aa4.45□□□□□ -1.7
CDC9YDL164C OSW2Q12202 724 aa4.45□□□□□ -1.7
CDC9YDL164C PXL1P36166 706 aa4.44□□□□□ -1.7
CDC9YDL164C YBL029WP38201 376 aa4.44□□□□□ -1.7
CDC9YDL164C MLH1P38920 769 aa4.44□□□□□ -1.7
CDC9YDL164C SAK1P38990 1142 aa4.44□□□□□ -1.7
CDC9YDL164C CHS6P40955 746 aa4.44□□□□□ -1.7
CDC9YDL164C CAK1P43568 368 aaPredicted RBP4.44□□□□□ -1.7
CDC9YDL164C ZAP1P47043 880 aa4.44□□□□□ -1.7
CDC9YDL164C MRPS35P53292 345 aa4.44□□□□□ -1.7
CDC9YDL164C RHO5P53879 331 aaKnown RBP4.44□□□□□ -1.7
CDC9YDL164C ADA2Q02336 434 aa4.44□□□□□ -1.7
CDC9YDL164C RQC1Q05468 723 aaKnown RBP4.44□□□□□ -1.7
CDC9YDL164C VPS54Q12071 889 aa4.44□□□□□ -1.7
CDC9YDL164C CTF3Q12748 733 aa4.44□□□□□ -1.7
CDC9YDL164C YJR112W-AQ3E743 109 aa4.44□□□□□ -1.7
CDC9YDL164C YML003WP0CF16 290 aa4.44□□□□□ -1.7
CDC9YDL164C PHO84P25297 587 aaKnown RBP4.44□□□□□ -1.7
CDC9YDL164C SYN8P31377 255 aa4.44□□□□□ -1.7
CDC9YDL164C MET22P32179 357 aa4.44□□□□□ -1.7
CDC9YDL164C AFG1P32317 509 aa4.44□□□□□ -1.7
CDC9YDL164C STE14P32584 239 aa4.44□□□□□ -1.7
CDC9YDL164C SEC66P33754 206 aa4.44□□□□□ -1.7
CDC9YDL164C SEF1P34228 1148 aa4.44□□□□□ -1.7
CDC9YDL164C YBR139WP38109 508 aa4.44□□□□□ -1.7
CDC9YDL164C MSS4P38994 779 aa4.44□□□□□ -1.7
CDC9YDL164C GET2P40056 285 aa4.44□□□□□ -1.7
CDC9YDL164C CUE3P53137 624 aaKnown RBP4.44□□□□□ -1.7
CDC9YDL164C MSC2Q03455 724 aa4.44□□□□□ -1.7
CDC9YDL164C VPS20Q04272 221 aa4.44□□□□□ -1.7
CDC9YDL164C TAP42Q04372 366 aa4.44□□□□□ -1.7
CDC9YDL164C HER1Q12276 1246 aa4.44□□□□□ -1.7
CDC9YDL164C ARG80P07249 177 aa4.43□□□□□ -1.7
CDC9YDL164C YSP3P25036 478 aa4.43□□□□□ -1.7
CDC9YDL164C SPS22P25380 463 aa4.43□□□□□ -1.7
CDC9YDL164C URK1P27515 501 aa4.43□□□□□ -1.7
CDC9YDL164C SRB2P34162 210 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms