RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	CUS2	P53830	285 aa	Predicted RBP	6.99	□□□□□ -1.29
SNT309	YPR101W	SQS1	P53866	767 aa	Known RBP	6.99	□□□□□ -1.29
SNT309	YPR101W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	6.99	□□□□□ -1.29	not detected
SNT309	YPR101W	VPS9	P54787	451 aa		6.99	□□□□□ -1.29
SNT309	YPR101W	RNY1	Q02933	434 aa	Known RBP	6.99	□□□□□ -1.29
SNT309	YPR101W	CWC21	Q03375	135 aa	Known RBP	6.99	□□□□□ -1.29
SNT309	YPR101W	YET2	Q04210	160 aa		6.99	□□□□□ -1.29
SNT309	YPR101W	ATG26	Q06321	1198 aa		6.99	□□□□□ -1.29
SNT309	YPR101W	PSR1	Q07800	427 aa		6.99	□□□□□ -1.29
SNT309	YPR101W	THI20	Q08224	551 aa		6.99	□□□□□ -1.29
SNT309	YPR101W	SPE3	Q12074	293 aa	Known RBP	6.99	□□□□□ -1.29
SNT309	YPR101W	CFT2	Q12102	859 aa	Predicted RBP	6.99	□□□□□ -1.29
SNT309	YPR101W	HSH49	Q99181	213 aa	Predicted RBP	6.99	□□□□□ -1.29
SNT309	YPR101W	YPR089W	O13585	888 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	COX4	P04037	155 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	RPP1B	P10622	106 aa	Known RBP	6.98	□□□□□ -1.29
SNT309	YPR101W	INO1	P11986	533 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	RGR1	P19263	1082 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	PMI40	P29952	429 aa	Known RBP	6.98	□□□□□ -1.29
SNT309	YPR101W	HEM12	P32347	362 aa	Predicted RBP	6.98	□□□□□ -1.29
SNT309	YPR101W	KDX1	P36005	433 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	PDX3	P38075	228 aa	Known RBP	6.98	□□□□□ -1.29
SNT309	YPR101W	ATG12	P38316	186 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	ARN1	P38731	627 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	UTP9	P38882	575 aa	Known RBP	6.98	□□□□□ -1.29
SNT309	YPR101W	SEC31	P38968	1273 aa	Known RBP	6.98	□□□□□ -1.29
SNT309	YPR101W	DSE1	P40077	573 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	MPH1	P40562	993 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	FMP32	P43557	207 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	RRT5	P43607	289 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	ISM1	P48526	1002 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	PEX31	P53203	462 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	DCP2	P53550	970 aa	Known RBP	6.98	□□□□□ -1.29
SNT309	YPR101W	JIP5	Q06214	492 aa	Predicted RBP	6.98	□□□□□ -1.29
SNT309	YPR101W	GGA1	Q06336	557 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	ASA1	Q06822	443 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	IES3	Q12345	250 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	ECM29	P38737	1868 aa		6.98	□□□□□ -1.29
SNT309	YPR101W	SBP1	P10080	294 aa	Known RBP	6.97	□□□□□ -1.29
SNT309	YPR101W	GLN3	P18494	730 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	YCL068C	P25593	260 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	AEP1	P32493	518 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	RPT1	P33299	467 aa	Known RBP	6.97	□□□□□ -1.29
SNT309	YPR101W	DEF1	P35732	738 aa	Known RBP	6.97	□□□□□ -1.29
SNT309	YPR101W	NUP60	P39705	539 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	YAT2	P40017	923 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	FIR1	P40020	876 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	PEA2	P40091	420 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	ASN2	P49090	572 aa	Known RBP	6.97	□□□□□ -1.29
SNT309	YPR101W	RRT6	P53117	311 aa	Predicted RBP	6.97	□□□□□ -1.29
SNT309	YPR101W	ASI2	P53895	289 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	SLU7	Q02775	382 aa	Known RBP	6.97	□□□□□ -1.29
SNT309	YPR101W	YML020W	Q03722	664 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	YDR179W-A	Q03983	463 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	DYN3	Q04949	312 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	FAR10	Q06001	478 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	ENT4	Q07872	247 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	UBR2	Q07963	1872 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	MSC6	Q08818	692 aa	Known RBP	6.97	□□□□□ -1.29
SNT309	YPR101W	APC9	Q12107	265 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	MSH5	Q12175	901 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	YMR030W-A	Q3E760	96 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	NHA1	Q99271	985 aa		6.97	□□□□□ -1.29
SNT309	YPR101W	STE2	D6VTK4	431 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	CNA1	P23287	553 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	DPB2	P24482	689 aa	Predicted RBP	6.96	□□□□□ -1.3
SNT309	YPR101W	YUR1	P26725	428 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	ATP7	P30902	174 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	CCR4	P31384	837 aa	Known RBP	6.96	□□□□□ -1.3
SNT309	YPR101W	UTR2	P32623	467 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	NPL6	P32832	435 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	SRP101	P32916	621 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	TBS1	P38114	1094 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	BIT2	P38346	545 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	PPE1	P38796	400 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	MEF2	P39677	819 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	UBP7	P40453	1071 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	HPM1	P40481	377 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	ARC35	P53731	342 aa	Known RBP	6.96	□□□□□ -1.3
SNT309	YPR101W	ALG11	P53954	548 aa	Known RBP	6.96	□□□□□ -1.3
SNT309	YPR101W	SLG1	P54867	378 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	ADE12	P80210	433 aa	Known RBP	6.96	□□□□□ -1.3
SNT309	YPR101W	CWC15	Q03772	175 aa	Known RBP	6.96	□□□□□ -1.3
SNT309	YPR101W	SNU56	Q03782	492 aa	Known RBP	6.96	□□□□□ -1.3
SNT309	YPR101W	DOT1	Q04089	582 aa	Known RBP	6.96	□□□□□ -1.3
SNT309	YPR101W	YOL019W	Q08157	551 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	APC5	Q08683	685 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	6.96	□□□□□ -1.3	not detected
SNT309	YPR101W	CHS5	Q12114	671 aa	Known RBP	6.96	□□□□□ -1.3
SNT309	YPR101W	LDB17	Q12342	491 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	CTF3	Q12748	733 aa		6.96	□□□□□ -1.3
SNT309	YPR101W	EFG1	Q3E705	233 aa	Known RBP	6.96	□□□□□ -1.3
SNT309	YPR101W	ATP12	P22135	325 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	PHO87	P25360	923 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	LRE1	P25579	583 aa	Known RBP	6.95	□□□□□ -1.3
SNT309	YPR101W	CSM1	P25651	190 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	NDI1	P32340	513 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	TIF3	P34167	436 aa	Known RBP	6.95	□□□□□ -1.3
SNT309	YPR101W	AGP2	P38090	596 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	YHI9	P38765	294 aa		6.95	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms