RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF2	YOR290C	GTB1	Q04924	702 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	DON1	Q05610	365 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	SSQ1	Q05931	657 aa	Predicted RBP	4.12	□□□□□ -1.75
SNF2	YOR290C	NCA2	Q12374	616 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	RPC40	P07703	335 aa	Known RBP	4.12	□□□□□ -1.75
SNF2	YOR290C	SNF6	P18888	332 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	RTG3	P38165	486 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	ECM2	P38241	364 aa	Known RBP	4.12	□□□□□ -1.75
SNF2	YOR290C	RIM11	P38615	370 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	FET3	P38993	636 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	CIN4	P39110	191 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	GPI8	P49018	411 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	HFM1	P51979	1187 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	MLC1	P53141	149 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	YGR066C	P53242	292 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	RBG2	P53295	368 aa	Known RBP	4.12	□□□□□ -1.75
SNF2	YOR290C	OKP1	P53298	406 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	FYV6	P53913	173 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	ECM11	Q04110	302 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	FRE3	Q08905	711 aa		4.12	□□□□□ -1.75
SNF2	YOR290C	RPL7A	P05737	244 aa	Known RBP	4.11	□□□□□ -1.75
SNF2	YOR290C	STE6	P12866	1290 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	ADE1	P27616	306 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	FUN26	P31381	517 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	SEC21	P32074	935 aa	Known RBP	4.11	□□□□□ -1.75
SNF2	YOR290C	PDR3	P33200	976 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	POP7	P38291	140 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	MSG5	P38590	489 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	VID27	P40157	782 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	TIR3	P40552	269 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	SWP82	P43554	623 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	CCE1	Q03702	353 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	VIP1	Q06685	1146 aa	Known RBP	4.11	□□□□□ -1.75
SNF2	YOR290C	REH1	Q06709	432 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	GPI13	Q07830	1017 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	YOL036W	Q08206	761 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	CSM4	Q08955	156 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	SPE3	Q12074	293 aa	Known RBP	4.11	□□□□□ -1.75
SNF2	YOR290C	SKM1	Q12469	655 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	SNF8	Q12483	233 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	RPN13	O13563	156 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	YME2	P32843	850 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	APM3	P38153	483 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	RFS1	P38234	210 aa	Known RBP	4.11	□□□□□ -1.75
SNF2	YOR290C	RTC2	P38279	296 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	YBR259W	P38338	688 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	CCC2	P38995	1004 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	YEL023C	P39992	682 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	VAB2	P40003	282 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	COX15	P40086	486 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	PHO23	P50947	330 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	DIG2	Q03373	323 aa	Known RBP	4.11	□□□□□ -1.75
SNF2	YOR290C	YDR239C	Q03780	787 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	GUP2	Q08929	609 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	GRX6	Q12438	231 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	HIS1	P00498	297 aa	Known RBP	4.11	□□□□□ -1.75
SNF2	YOR290C	PRE7	P23724	241 aa	Known RBP	4.11	□□□□□ -1.75
SNF2	YOR290C	AAR2	P32357	355 aa	Predicted RBP	4.11	□□□□□ -1.75
SNF2	YOR290C	YET1	P35723	206 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	ASG1	P40467	964 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	VHR1	P40522	640 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	CCM1	P48237	864 aa	Predicted RBP	4.11	□□□□□ -1.75
SNF2	YOR290C	RPN14	P53196	417 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	SYF2	P53277	215 aa	Predicted RBP	4.11	□□□□□ -1.75
SNF2	YOR290C	TRM44	Q02648	567 aa	Known RBP	4.11	□□□□□ -1.75
SNF2	YOR290C	GPI17	Q04080	534 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	RRN11	Q04712	507 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	PIN2	Q12057	282 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	HOS1	Q12214	470 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	CYB2	P00175	591 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	AI1	P03875	834 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	DAL7	P21826	554 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	OPI1	P21957	404 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	SUV3	P32580	737 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	YHL044W	P38727	235 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	SLX8	P40072	274 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	ATG32	P40458	529 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	RMD9	P53140	646 aa	Known RBP	4.11	□□□□□ -1.75
SNF2	YOR290C	PEF1	P53238	335 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	YML079W	Q03629	201 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	YDR286C	Q05530	114 aa		4.11	□□□□□ -1.75
SNF2	YOR290C	TSR3	Q12094	313 aa	Known RBP	4.11	□□□□□ -1.75
SNF2	YOR290C	MSW1	P04803	379 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	PEP4	P07267	405 aa	Known RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	OCA4	P25366	362 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	YMR262W	P38430	313 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	PCF11	P39081	626 aa	Predicted RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	SEO1	P39709	593 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	NUP82	P40368	713 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	PKP1	P40530	394 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	MDJ2	P42834	146 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	DCP2	P53550	970 aa	Known RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	YMR315W	Q04869	349 aa	Known RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	CRN1	Q06440	651 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	GRS2	Q06817	618 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	DPH6	Q12429	685 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	RAD7	P06779	565 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	HOM2	P13663	365 aa	Known RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	SAR1	P20606	190 aa	Known RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	RNA14	P25298	677 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms