RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	LST4	P34239	828 aa		6.11	□□□□□ -1.43
CSL4	YNL232W	ECM13	P38195	257 aa		6.11	□□□□□ -1.43
CSL4	YNL232W	SAK1	P38990	1142 aa		6.11	□□□□□ -1.43
CSL4	YNL232W	COQ5	P49017	307 aa		6.11	□□□□□ -1.43
CSL4	YNL232W	PEX14	P53112	341 aa		6.11	□□□□□ -1.43
CSL4	YNL232W	PIL1	P53252	339 aa	Known RBP	6.11	□□□□□ -1.43
CSL4	YNL232W	AQR1	P53943	586 aa		6.11	□□□□□ -1.43
CSL4	YNL232W	PIR3	Q03180	325 aa		6.11	□□□□□ -1.43
CSL4	YNL232W	ECM38	Q05902	660 aa	Predicted RBP	6.11	□□□□□ -1.43
CSL4	YNL232W	TMA10	Q06177	86 aa		6.11	□□□□□ -1.43
CSL4	YNL232W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	6.11	□□□□□ -1.43	not detected
CSL4	YNL232W	SVS1	Q12254	260 aa		6.11	□□□□□ -1.43
CSL4	YNL232W	COX3	P00420	269 aa		6.1	□□□□□ -1.43
CSL4	YNL232W	RPL1A	P0CX43	217 aa	Known RBP	6.1	□□□□□ -1.43
CSL4	YNL232W	RPL1B	P0CX44	217 aa	Known RBP	6.1	□□□□□ -1.43
CSL4	YNL232W	CYC8	P14922	966 aa		6.1	□□□□□ -1.43
CSL4	YNL232W	ARF2	P19146	181 aa	Known RBP	6.1	□□□□□ -1.43
CSL4	YNL232W	ERG6	P25087	383 aa	Known RBP	6.1	□□□□□ -1.43
CSL4	YNL232W	SAT4	P25333	603 aa	Known RBP	6.1	□□□□□ -1.43
CSL4	YNL232W	LRE1	P25579	583 aa	Known RBP	6.1	□□□□□ -1.43
CSL4	YNL232W	SYP1	P25623	870 aa	Known RBP	6.1	□□□□□ -1.43
CSL4	YNL232W	SWI3	P32591	825 aa		6.1	□□□□□ -1.43
CSL4	YNL232W	SNF7	P39929	240 aa	Known RBP	6.1	□□□□□ -1.43
CSL4	YNL232W	RPS26A	P39938	119 aa	Known RBP	6.1	□□□□□ -1.43
CSL4	YNL232W	RPS26B	P39939	119 aa	Known RBP	6.1	□□□□□ -1.43
CSL4	YNL232W	RSM25	P40496	264 aa		6.1	□□□□□ -1.43
CSL4	YNL232W	SUN4	P53616	420 aa		6.1	□□□□□ -1.43
CSL4	YNL232W	TIM8	P57744	87 aa		6.1	□□□□□ -1.43
CSL4	YNL232W	CEF1	Q03654	590 aa	Predicted RBP	6.1	□□□□□ -1.43
CSL4	YNL232W	YMR206W	Q03695	313 aa		6.1	□□□□□ -1.43
CSL4	YNL232W	COG8	Q04632	607 aa		6.1	□□□□□ -1.43
CSL4	YNL232W	HRD3	Q05787	833 aa		6.1	□□□□□ -1.43
CSL4	YNL232W	MRL1	Q06815	381 aa		6.1	□□□□□ -1.43
CSL4	YNL232W	RXT3	Q07458	294 aa		6.1	□□□□□ -1.43
CSL4	YNL232W	GPB1	Q08886	897 aa		6.1	□□□□□ -1.43
CSL4	YNL232W	TCO89	Q08921	799 aa		6.1	□□□□□ -1.43
CSL4	YNL232W	SUL2	Q12325	893 aa		6.1	□□□□□ -1.43
CSL4	YNL232W	CDC42	P19073	191 aa		6.09	□□□□□ -1.43
CSL4	YNL232W	SEC15	P22224	910 aa		6.09	□□□□□ -1.43
CSL4	YNL232W	VBA3	P25594	458 aa		6.09	□□□□□ -1.43
CSL4	YNL232W	VBA5	P36172	582 aa		6.09	□□□□□ -1.43
CSL4	YNL232W	MRPL40	P36534	297 aa		6.09	□□□□□ -1.43
CSL4	YNL232W	CRP1	P38845	465 aa	Known RBP	6.09	□□□□□ -1.43
CSL4	YNL232W	UBP7	P40453	1071 aa		6.09	□□□□□ -1.43
CSL4	YNL232W	YSH1	Q06224	779 aa	Predicted RBP	6.09	□□□□□ -1.43
CSL4	YNL232W	YFT2	Q06676	274 aa		6.09	□□□□□ -1.43
CSL4	YNL232W	IWR1	Q07532	353 aa	Predicted RBP	6.09	□□□□□ -1.43
CSL4	YNL232W	MLH2	Q07980	695 aa		6.09	□□□□□ -1.43
CSL4	YNL232W	NDD1	Q08887	554 aa		6.09	□□□□□ -1.43
CSL4	YNL232W	SAM4	Q08985	325 aa	Known RBP	6.09	□□□□□ -1.43
CSL4	YNL232W	PUS9	Q12069	462 aa		6.09	□□□□□ -1.43
CSL4	YNL232W	GCR1	P07261	785 aa		6.08	□□□□□ -1.44
CSL4	YNL232W	APL1	P27351	700 aa		6.08	□□□□□ -1.44
CSL4	YNL232W	CAP1	P28495	268 aa	Known RBP	6.08	□□□□□ -1.44
CSL4	YNL232W	ASG1	P40467	964 aa		6.08	□□□□□ -1.44
CSL4	YNL232W	CNN1	P43618	361 aa		6.08	□□□□□ -1.44
CSL4	YNL232W	SWS2	P53937	143 aa		6.08	□□□□□ -1.44
CSL4	YNL232W	OPI10	Q08202	246 aa		6.08	□□□□□ -1.44
CSL4	YNL232W	CLP1	Q08685	445 aa	Predicted RBP	6.08	□□□□□ -1.44
CSL4	YNL232W	YOR389W	Q08912	624 aa		6.08	□□□□□ -1.44
CSL4	YNL232W	YPL278C	Q08990	100 aa		6.08	□□□□□ -1.44
CSL4	YNL232W	SLX4	Q12098	748 aa		6.08	□□□□□ -1.44
CSL4	YNL232W	RKM5	Q12367	367 aa		6.08	□□□□□ -1.44
CSL4	YNL232W	PGI1	P12709	554 aa	Known RBP	6.07	□□□□□ -1.44
CSL4	YNL232W	KIN2	P13186	1147 aa	Known RBP	6.07	□□□□□ -1.44
CSL4	YNL232W	SEC63	P14906	663 aa		6.07	□□□□□ -1.44
CSL4	YNL232W	YHR078W	P38799	552 aa		6.07	□□□□□ -1.44
CSL4	YNL232W	EXO1	P39875	702 aa		6.07	□□□□□ -1.44
CSL4	YNL232W	GTF1	P53260	183 aa	Predicted RBP	6.07	□□□□□ -1.44
CSL4	YNL232W	RPA49	Q01080	415 aa	Predicted RBP	6.07	□□□□□ -1.44
CSL4	YNL232W	TRM82	Q03774	444 aa		6.07	□□□□□ -1.44
CSL4	YNL232W	RLP24	Q07915	199 aa	Known RBP	6.07	□□□□□ -1.44
CSL4	YNL232W	PSR2	Q07949	397 aa		6.07	□□□□□ -1.44
CSL4	YNL232W	YPL150W	Q12152	901 aa		6.07	□□□□□ -1.44
CSL4	YNL232W	CPA2	P03965	1118 aa	Known RBP	6.06	□□□□□ -1.44
CSL4	YNL232W	COX11	P19516	300 aa	Known RBP	6.06	□□□□□ -1.44
CSL4	YNL232W	BRF1	P29056	596 aa		6.06	□□□□□ -1.44
CSL4	YNL232W	MCM2	P29469	868 aa		6.06	□□□□□ -1.44
CSL4	YNL232W	CBF2	P32504	956 aa		6.06	□□□□□ -1.44
CSL4	YNL232W	SER33	P40510	469 aa		6.06	□□□□□ -1.44
CSL4	YNL232W	MPH1	P40562	993 aa		6.06	□□□□□ -1.44
CSL4	YNL232W	PFD1	P46988	109 aa		6.06	□□□□□ -1.44
CSL4	YNL232W	PBP1	P53297	722 aa	Known RBP	6.06	□□□□□ -1.44
CSL4	YNL232W	SLI1	P53304	468 aa		6.06	□□□□□ -1.44
CSL4	YNL232W	YAP6	Q03935	383 aa		6.06	□□□□□ -1.44
CSL4	YNL232W	MED1	Q12321	566 aa		6.06	□□□□□ -1.44
CSL4	YNL232W	NAG1	Q8TGN9	163 aa		6.06	□□□□□ -1.44
CSL4	YNL232W	UBR1	P19812	1950 aa		6.06	□□□□□ -1.44
CSL4	YNL232W	BAS1	P22035	811 aa		6.05	□□□□□ -1.44
CSL4	YNL232W	MIC60	P36112	540 aa		6.05	□□□□□ -1.44
CSL4	YNL232W	YBR053C	P38235	358 aa		6.05	□□□□□ -1.44
CSL4	YNL232W	AIM23	P47015	356 aa		6.05	□□□□□ -1.44
CSL4	YNL232W	MSE1	P48525	536 aa		6.05	□□□□□ -1.44
CSL4	YNL232W	DOS2	P54858	310 aa		6.05	□□□□□ -1.44
CSL4	YNL232W	SPG3	Q04398	127 aa	Predicted RBP	6.05	□□□□□ -1.44
CSL4	YNL232W	PER33	Q12144	273 aa		6.05	□□□□□ -1.44
CSL4	YNL232W	RNR2	P09938	399 aa	Known RBP	6.04	□□□□□ -1.44
CSL4	YNL232W	HIR1	P32479	840 aa		6.04	□□□□□ -1.44
CSL4	YNL232W	NOP4	P37838	685 aa	Known RBP	6.04	□□□□□ -1.44
CSL4	YNL232W	FET5	P43561	622 aa		6.04	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms