RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL40B	YKR094C	APL5	Q08951	932 aa	Known RBP	2.67	□□□□□ -1.98
RPL40B	YKR094C	RTK1	Q12100	620 aa	Predicted RBP	2.67	□□□□□ -1.98
RPL40B	YKR094C	NUP145	P49687	1317 aa		2.67	□□□□□ -1.98
RPL40B	YKR094C	PRP16	P15938	1071 aa	Predicted RBP	2.66	□□□□□ -1.98
RPL40B	YKR094C	PTC6	P25646	442 aa		2.66	□□□□□ -1.98
RPL40B	YKR094C	PRE2	P30656	287 aa	Known RBP	2.66	□□□□□ -1.98
RPL40B	YKR094C	EAF5	P39995	279 aa		2.66	□□□□□ -1.98
RPL40B	YKR094C	YPR003C	P53394	754 aa		2.66	□□□□□ -1.98
RPL40B	YKR094C	ARP9	Q05123	467 aa		2.66	□□□□□ -1.98
RPL40B	YKR094C	PDR8	Q06149	701 aa		2.66	□□□□□ -1.98
RPL40B	YKR094C	YPL191C	Q08930	360 aa		2.66	□□□□□ -1.98
RPL40B	YKR094C	HOS1	Q12214	470 aa		2.66	□□□□□ -1.98
RPL40B	YKR094C	SEC1	P30619	724 aa	Known RBP	2.65	□□□□□ -1.99
RPL40B	YKR094C	EFM2	P38347	419 aa		2.65	□□□□□ -1.99
RPL40B	YKR094C	ERC1	P38767	581 aa		2.65	□□□□□ -1.99
RPL40B	YKR094C	TPA1	P40032	644 aa	Known RBP	2.65	□□□□□ -1.99
RPL40B	YKR094C	CDC1	P40986	491 aa		2.65	□□□□□ -1.99
RPL40B	YKR094C	GSM1	P42950	618 aa		2.65	□□□□□ -1.99
RPL40B	YKR094C	YNR071C	P53757	342 aa		2.65	□□□□□ -1.99
RPL40B	YKR094C	ESBP6	P53918	673 aa		2.65	□□□□□ -1.99
RPL40B	YKR094C	CRZ1	P53968	678 aa		2.65	□□□□□ -1.99
RPL40B	YKR094C	RSA1	Q08932	381 aa		2.65	□□□□□ -1.99
RPL40B	YKR094C	LEA1	Q08963	238 aa	Predicted RBP	2.65	□□□□□ -1.99
RPL40B	YKR094C	CWC2	Q12046	339 aa	Predicted RBP	2.65	□□□□□ -1.99
RPL40B	YKR094C	SAN1	P22470	610 aa		2.64	□□□□□ -1.99
RPL40B	YKR094C	OCT1	P35999	772 aa		2.64	□□□□□ -1.99
RPL40B	YKR094C	PMT3	P47190	753 aa		2.64	□□□□□ -1.99
RPL40B	YKR094C	EAF7	P53911	425 aa	Known RBP	2.64	□□□□□ -1.99
RPL40B	YKR094C	CRF1	Q04930	467 aa		2.64	□□□□□ -1.99
RPL40B	YKR094C	PET309	P32522	965 aa	Predicted RBP	2.63	□□□□□ -1.99
RPL40B	YKR094C	PPG1	P32838	368 aa		2.63	□□□□□ -1.99
RPL40B	YKR094C	EXO84	P38261	753 aa		2.63	□□□□□ -1.99
RPL40B	YKR094C	MAD2	P40958	196 aa		2.63	□□□□□ -1.99
RPL40B	YKR094C	ROK1	P45818	564 aa	Predicted RBP	2.63	□□□□□ -1.99
RPL40B	YKR094C	PSP1	P50896	841 aa	Known RBP	2.63	□□□□□ -1.99
RPL40B	YKR094C	CUL3	P53202	744 aa		2.63	□□□□□ -1.99
RPL40B	YKR094C	FCP1	Q03254	732 aa		2.63	□□□□□ -1.99
RPL40B	YKR094C	SKY1	Q03656	742 aa		2.63	□□□□□ -1.99
RPL40B	YKR094C	CAC2	Q04199	468 aa		2.63	□□□□□ -1.99
RPL40B	YKR094C	PIG1	Q06216	648 aa		2.63	□□□□□ -1.99
RPL40B	YKR094C	DIN7	Q12086	430 aa		2.63	□□□□□ -1.99
RPL40B	YKR094C	TAH18	Q12181	623 aa		2.63	□□□□□ -1.99
RPL40B	YKR094C	PRP45	P28004	379 aa	Predicted RBP	2.62	□□□□□ -1.99
RPL40B	YKR094C	YMR254C	Q04838	102 aa		2.62	□□□□□ -1.99
RPL40B	YKR094C	MCH4	Q08268	501 aa		2.62	□□□□□ -1.99
RPL40B	YKR094C	HNM1	P19807	563 aa		2.61	□□□□□ -1.99
RPL40B	YKR094C	SIP1	P32578	815 aa		2.61	□□□□□ -1.99
RPL40B	YKR094C	RPF2	P36160	344 aa	Known RBP	2.61	□□□□□ -1.99
RPL40B	YKR094C	KRE9	P39005	276 aa		2.61	□□□□□ -1.99
RPL40B	YKR094C	AZF1	P41696	914 aa		2.61	□□□□□ -1.99
RPL40B	YKR094C	ECI1	Q05871	280 aa		2.61	□□□□□ -1.99
RPL40B	YKR094C	POS5	Q06892	414 aa		2.61	□□□□□ -1.99
RPL40B	YKR094C	FRE3	Q08905	711 aa		2.61	□□□□□ -1.99
RPL40B	YKR094C	FAP7	Q12055	197 aa	Predicted RBP	2.61	□□□□□ -1.99
RPL40B	YKR094C	YML002W	P0CF17	737 aa		2.6	□□□□□ -1.99
RPL40B	YKR094C	ARB1	P40024	610 aa	Known RBP	2.6	□□□□□ -1.99
RPL40B	YKR094C	GPP2	P40106	250 aa	Known RBP	2.6	□□□□□ -1.99
RPL40B	YKR094C	YJL070C	P40361	888 aa		2.6	□□□□□ -1.99
RPL40B	YKR094C	NPA3	P47122	385 aa		2.6	□□□□□ -1.99
RPL40B	YKR094C	TRS31	Q03337	283 aa		2.6	□□□□□ -1.99
RPL40B	YKR094C	RMP1	Q12530	201 aa		2.6	□□□□□ -1.99
RPL40B	YKR094C	REV1	P12689	985 aa		2.59	□□□□□ -1.99
RPL40B	YKR094C	VFA1	P40080	203 aa		2.59	□□□□□ -1.99
RPL40B	YKR094C	UBP8	P50102	471 aa		2.59	□□□□□ -1.99
RPL40B	YKR094C	YNR029C	P53729	429 aa	Known RBP	2.59	□□□□□ -1.99
RPL40B	YKR094C	YTA7	P40340	1379 aa		2.59	□□□□□ -2
RPL40B	YKR094C	PMS1	P14242	873 aa		2.58	□□□□□ -2
RPL40B	YKR094C	RPS7A	P26786	190 aa	Known RBP	2.58	□□□□□ -2
RPL40B	YKR094C	FAA2	P39518	744 aa		2.58	□□□□□ -2
RPL40B	YKR094C	STL1	P39932	569 aa		2.58	□□□□□ -2
RPL40B	YKR094C	IML2	P47031	731 aa		2.58	□□□□□ -2
RPL40B	YKR094C	CBP1	P07252	654 aa		2.57	□□□□□ -2
RPL40B	YKR094C	YCR006C	P25350	157 aa		2.57	□□□□□ -2
RPL40B	YKR094C	LAC1	P28496	418 aa		2.57	□□□□□ -2
RPL40B	YKR094C	RAD24	P32641	659 aa		2.57	□□□□□ -2
RPL40B	YKR094C	YGR237C	P50089	785 aa		2.57	□□□□□ -2
RPL40B	YKR094C	DBP10	Q12389	995 aa	Known RBP	2.57	□□□□□ -2
RPL40B	YKR094C	YBR298C-A	Q8TGK4	73 aa		2.57	□□□□□ -2
RPL40B	YKR094C	GPA1	P08539	472 aa		2.56	□□□□□ -2
RPL40B	YKR094C	BAR1	P12630	587 aa		2.56	□□□□□ -2
RPL40B	YKR094C	MGR1	P25573	417 aa		2.56	□□□□□ -2
RPL40B	YKR094C	CPR3	P25719	182 aa		2.56	□□□□□ -2
RPL40B	YKR094C	UTP14	Q04500	899 aa	Known RBP	2.56	□□□□□ -2
RPL40B	YKR094C	SWF1	Q04629	336 aa		2.56	□□□□□ -2
RPL40B	YKR094C	ECM38	Q05902	660 aa	Predicted RBP	2.56	□□□□□ -2
RPL40B	YKR094C	TLG2	Q08144	397 aa		2.56	□□□□□ -2
RPL40B	YKR094C	YER145C-A	A0A023PYF4	145 aa		2.55	□□□□□ -2
RPL40B	YKR094C	COX1	P00401	534 aa		2.55	□□□□□ -2
RPL40B	YKR094C	CTT1	P06115	562 aa		2.55	□□□□□ -2
RPL40B	YKR094C	PDA1	P16387	420 aa	Known RBP	2.55	□□□□□ -2
RPL40B	YKR094C	YHR218W	P38899	603 aa		2.55	□□□□□ -2
RPL40B	YKR094C	DUG1	P43616	481 aa	Known RBP	2.55	□□□□□ -2
RPL40B	YKR094C	POL31	P46957	487 aa		2.55	□□□□□ -2
RPL40B	YKR094C	ATG27	P46989	271 aa		2.55	□□□□□ -2
RPL40B	YKR094C	YRB30	P53107	440 aa	Predicted RBP	2.55	□□□□□ -2
RPL40B	YKR094C	SMA1	Q02651	245 aa		2.55	□□□□□ -2
RPL40B	YKR094C	PDE1	P22434	369 aa		2.54	□□□□□ -2
RPL40B	YKR094C	TIF3	P34167	436 aa	Known RBP	2.54	□□□□□ -2
RPL40B	YKR094C	SLX1	P38324	304 aa		2.54	□□□□□ -2
RPL40B	YKR094C	LEU5	P38702	357 aa		2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 54 ms