RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C CTM1P38818 585 aa1.1□□□□□ -2.23
VAM6YDL077C LSM12P38828 187 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C YDR089WP38966 869 aa1.1□□□□□ -2.23
VAM6YDL077C AKR1P39010 764 aa1.1□□□□□ -2.23
VAM6YDL077C AST2P39945 430 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C PCI8P40512 444 aa1.1□□□□□ -2.23
VAM6YDL077C RPL34BP40525 121 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C TED1P40533 473 aa1.1□□□□□ -2.23
VAM6YDL077C GTT1P40582 234 aa1.1□□□□□ -2.23
VAM6YDL077C COS4P43542 379 aa1.1□□□□□ -2.23
VAM6YDL077C SWP82P43554 623 aa1.1□□□□□ -2.23
VAM6YDL077C BNA3P47039 444 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C COS5P47187 383 aa1.1□□□□□ -2.23
VAM6YDL077C RFX1P48743 811 aa1.1□□□□□ -2.23
VAM6YDL077C UBC12P52491 188 aa1.1□□□□□ -2.23
VAM6YDL077C NCS6P53088 359 aa1.1□□□□□ -2.23
VAM6YDL077C GUP1P53154 560 aa1.1□□□□□ -2.23
VAM6YDL077C PEF1P53238 335 aa1.1□□□□□ -2.23
VAM6YDL077C TWF1P53250 332 aa1.1□□□□□ -2.23
VAM6YDL077C SLI1P53304 468 aa1.1□□□□□ -2.23
VAM6YDL077C COS1P53822 381 aa1.1□□□□□ -2.23
VAM6YDL077C ZDS2P54786 942 aa1.1□□□□□ -2.23
VAM6YDL077C SHR3Q02774 210 aa1.1□□□□□ -2.23
VAM6YDL077C ABZ2Q03266 374 aa1.1□□□□□ -2.23
VAM6YDL077C CSN9Q03981 162 aa1.1□□□□□ -2.23
VAM6YDL077C CDC123Q05791 360 aa1.1□□□□□ -2.23
VAM6YDL077C BUR2Q05949 395 aa1.1□□□□□ -2.23
VAM6YDL077C SFH1Q06168 426 aa1.1□□□□□ -2.23
VAM6YDL077C YLR352WQ06479 807 aa1.1□□□□□ -2.23
VAM6YDL077C RCL1Q08096 367 aaPredicted RBP1.1□□□□□ -2.23
VAM6YDL077C YAP7Q08182 245 aa1.1□□□□□ -2.23
VAM6YDL077C RPN8Q08723 338 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C HUA2Q12134 243 aa1.1□□□□□ -2.23
VAM6YDL077C HAL9Q12180 1030 aa1.1□□□□□ -2.23
VAM6YDL077C YLR122CQ12312 125 aa1.1□□□□□ -2.23
VAM6YDL077C ENO2P00925 437 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C TRP3P00937 484 aa1.1□□□□□ -2.23
VAM6YDL077C CPA2P03965 1118 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C SCP160P06105 1222 aaKnown RBP RIP-Chip data1.1□□□□□ -2.23not detected
VAM6YDL077C SNF1P06782 633 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C ILS1P09436 1072 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C MRP2P10663 115 aaPredicted RBP1.1□□□□□ -2.23
VAM6YDL077C DBF2P22204 572 aa1.1□□□□□ -2.23
VAM6YDL077C DBP2P24783 546 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C SED4P25365 1065 aa1.1□□□□□ -2.23
VAM6YDL077C POF1P25576 258 aa1.1□□□□□ -2.23
VAM6YDL077C PEP3P27801 918 aa1.1□□□□□ -2.23
VAM6YDL077C PET309P32522 965 aaPredicted RBP1.1□□□□□ -2.23
VAM6YDL077C PUB1P32588 453 aaKnown RBP RIP-Chip data1.1□□□□□ -2.23not detected
VAM6YDL077C BUD2P33314 1104 aa1.1□□□□□ -2.23
VAM6YDL077C PGM1P33401 570 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C TPO5P36029 618 aa1.1□□□□□ -2.23
VAM6YDL077C YBR241CP38142 488 aa1.1□□□□□ -2.23
VAM6YDL077C SEA4P38164 1038 aa1.1□□□□□ -2.23
VAM6YDL077C UBP13P38187 747 aa1.1□□□□□ -2.23
VAM6YDL077C GIP1P38229 639 aa1.1□□□□□ -2.23
VAM6YDL077C PEX28P38848 579 aa1.1□□□□□ -2.23
VAM6YDL077C PMC1P38929 1173 aaPredicted RBP1.1□□□□□ -2.23
VAM6YDL077C PLB1P39105 664 aa1.1□□□□□ -2.23
VAM6YDL077C HXT13P39924 564 aa1.1□□□□□ -2.23
VAM6YDL077C SAH1P39954 449 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C YER130CP39959 443 aa1.1□□□□□ -2.23
VAM6YDL077C DOT6P40059 670 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C SOK1P40317 901 aa1.1□□□□□ -2.23
VAM6YDL077C SWM2P40342 146 aa1.1□□□□□ -2.23
VAM6YDL077C UFE1P41834 346 aa1.1□□□□□ -2.23
VAM6YDL077C COX16P47081 118 aa1.1□□□□□ -2.23
VAM6YDL077C JHD2P47156 728 aaPredicted RBP1.1□□□□□ -2.23
VAM6YDL077C AAD10P47182 288 aa1.1□□□□□ -2.23
VAM6YDL077C PAC10P48363 199 aa1.1□□□□□ -2.23
VAM6YDL077C MLC1P53141 149 aa1.1□□□□□ -2.23
VAM6YDL077C COG2P53271 262 aa1.1□□□□□ -2.23
VAM6YDL077C TPO2P53283 614 aa1.1□□□□□ -2.23
VAM6YDL077C YNL165WP53891 406 aa1.1□□□□□ -2.23
VAM6YDL077C HDA1P53973 706 aa1.1□□□□□ -2.23
VAM6YDL077C DAK1P54838 584 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C BET4Q00618 327 aa1.1□□□□□ -2.23
VAM6YDL077C RPM2Q02773 1202 aa1.1□□□□□ -2.23
VAM6YDL077C MUK1Q02866 612 aa1.1□□□□□ -2.23
VAM6YDL077C FDC1Q03034 503 aa1.1□□□□□ -2.23
VAM6YDL077C SVL3Q03088 825 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C MTG1Q03151 367 aaPredicted RBP1.1□□□□□ -2.23
VAM6YDL077C PFA5Q03289 374 aa1.1□□□□□ -2.23
VAM6YDL077C VPS64Q03944 604 aa1.1□□□□□ -2.23
VAM6YDL077C GPI17Q04080 534 aa1.1□□□□□ -2.23
VAM6YDL077C RCO1Q04779 684 aa1.1□□□□□ -2.23
VAM6YDL077C ECI1Q05871 280 aa1.1□□□□□ -2.23
VAM6YDL077C VTA1Q06263 330 aa1.1□□□□□ -2.23
VAM6YDL077C ARV1Q06541 321 aa1.1□□□□□ -2.23
VAM6YDL077C SWA2Q06677 668 aa1.1□□□□□ -2.23
VAM6YDL077C DIB1Q06819 143 aaPredicted RBP1.1□□□□□ -2.23
VAM6YDL077C ASR1Q06834 288 aa1.1□□□□□ -2.23
VAM6YDL077C YDL073WQ07454 984 aa1.1□□□□□ -2.23
VAM6YDL077C THI3Q07471 609 aa1.1□□□□□ -2.23
VAM6YDL077C BRE4Q07660 1125 aa1.1□□□□□ -2.23
VAM6YDL077C YEH2Q07950 538 aa1.1□□□□□ -2.23
VAM6YDL077C DDC1Q08949 612 aa1.1□□□□□ -2.23
VAM6YDL077C THI21Q08975 551 aa1.1□□□□□ -2.23
VAM6YDL077C AIM41Q12032 185 aa1.1□□□□□ -2.23
VAM6YDL077C HRT3Q12347 344 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms