RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Spink4O35679 86 aa7.13□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Hectd1Q69ZR2 2618 aaKnown RBP7.13□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Fam19a5Q91WE9 132 aa7.13□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Crip2Q9DCT8 208 aaKnown RBP7.12□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Gm4707V9GXN5 68 aa7.12□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Gm5142Q8C5X9 133 aa7.12□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Igkv3-5A0A140T8M6 119 aa7.12□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Gm3443F7CCV5 94 aa7.12□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Trav14-1A0A0G2JF94 121 aa7.12□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Ube2aQ9Z255 152 aa7.11□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Ntn5Q3UQ22 452 aa7.1□□□□□ -1.27
Ldlr-201ENSMUST00000034713 BaalcQ8VHV1 145 aa7.1□□□□□ -1.27
Ldlr-201ENSMUST00000034713 UqcrqQ9CQ69 82 aa7.1□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Hcfc1Q61191 2045 aaKnown RBP7.1□□□□□ -1.27
Ldlr-201ENSMUST00000034713 4930535I16RikQ9CUI2 172 aa7.09□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Sprr2jO70561 109 aa7.09□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Ighv1-56A0A0A6YXG2 117 aa7.09□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Fam19a1Q7TPG8 133 aa7.09□□□□□ -1.27
Ldlr-201ENSMUST00000034713 Zfand2aQ9JII7 171 aa7.08□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Gm11565A2A4M7 156 aa7.08□□□□□ -1.28
Ldlr-201ENSMUST00000034713 CdsnQ7TPC1 561 aa7.08□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Ankrd17Q99NH0 2603 aaKnown RBP7.08□□□□□ -1.28
Ldlr-201ENSMUST00000034713 AtrQ9JKK8 2635 aa7.08□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Ighv10-3A0A075B5T6 119 aa7.08□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Q8K1L6 76 aa7.08□□□□□ -1.28
Ldlr-201ENSMUST00000034713 1700012A03RikQ9DAF1 130 aa7.08□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Bri3P28662 125 aa7.07□□□□□ -1.28
Ldlr-201ENSMUST00000034713 VcanQ62059 3357 aa7.07□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Pla2g1bQ9Z0Y2 146 aa7.07□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Ighv2-9A0A075B5Q5 116 aa7.06□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Celsr1O35161 3034 aa7.06□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Dmxl2Q8BPN8 3032 aa7.06□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Obox2E9PXV9 151 aa7.06□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Ndufb1P0DN34 57 aa7.06□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Rps28P62858 69 aaKnown RBP7.06□□□□□ -1.28
Ldlr-201ENSMUST00000034713 CrygeQ03740 174 aa7.06□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Gm5153P01627 120 aa7.05□□□□□ -1.28
Ldlr-201ENSMUST00000034713 H2al1aQ5M8Q2 105 aa7.05□□□□□ -1.28
Ldlr-201ENSMUST00000034713 H2al1eQ810S6 105 aa7.05□□□□□ -1.28
Ldlr-201ENSMUST00000034713 2310009B15RikA0A0A6YWI4 143 aa7.05□□□□□ -1.28
Ldlr-201ENSMUST00000034713 SptssbQ925E8 76 aa7.05□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Cd164l2Q9D6W7 172 aa7.05□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Trbv13-2A0A140T8N6 113 aa7.04□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Ifitm6A0A1B0GS75 124 aa7.04□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Gm43218A0A0G2JGT0 114 aa7.04□□□□□ -1.28
Ldlr-201ENSMUST00000034713 H2al1kJ3QP08 105 aa7.04□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Wfdc12Q9JHY3 85 aa7.04□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Gm11011D3Z3L9 86 aa7.03□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Ighv2-5A0A0A6YY69 116 aa7.03□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Apoc4Q61268 124 aa7.03□□□□□ -1.28
Ldlr-201ENSMUST00000034713 FlnaQ8BTM8 2647 aaKnown RBP7.03□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Gm26661M0QWV4 156 aa7.03□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Usp24B1AY13 2617 aaKnown RBP7.03□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Odf3l2Q3TZ65 277 aa7.02□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Wfdc10Q3V2J9 124 aa7.02□□□□□ -1.28
Ldlr-201ENSMUST00000034713 Krtap26-1Q9D7N2 215 aa7.02□□□□□ -1.28
Ldlr-201ENSMUST00000034713 A0A286YE49 62 aa7.02□□□□□ -1.29
Ldlr-201ENSMUST00000034713 H2al1bA0A087WP11 105 aa7.01□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Igkv3-10A0A0G2JGN0 119 aa7.01□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Ndufs5Q99LY9 106 aa7.01□□□□□ -1.29
Ldlr-201ENSMUST00000034713 FasnP19096 2504 aaKnown RBP7□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Gm9887F6RFI0 207 aa7□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Notch1Q01705 2531 aa7□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Ccdc179J3QM76 67 aa7□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Gpha2Q925Q5 128 aa7□□□□□ -1.29
Ldlr-201ENSMUST00000034713 P01819 144 aa7□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Gm17509Q9CZ61 145 aa7□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Igkv4-92A0A0B4J1I2 117 aa6.99□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Wdfy4E9Q2M9 3149 aa6.99□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Igkv1-117A0A140T8M0 119 aa6.99□□□□□ -1.29
Ldlr-201ENSMUST00000034713 A0A286YCN5 57 aa6.98□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Krtap24-1G3X9A2 248 aa6.97□□□□□ -1.29
Ldlr-201ENSMUST00000034713 CrygaP04345 174 aa6.97□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Ighv2-2A0A075B5P8 116 aa6.97□□□□□ -1.29
Ldlr-201ENSMUST00000034713 P01821 116 aa6.97□□□□□ -1.29
Ldlr-201ENSMUST00000034713 4930518I15RikQ3V2W7 57 aa6.97□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Akap13E9Q394 2776 aa6.97□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Psors1c2Q80ZC9 134 aa6.97□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Ighv8-13A0A075B5Y0 101 aa6.96□□□□□ -1.29
Ldlr-201ENSMUST00000034713 ScxQ64124 207 aa6.96□□□□□ -1.29
Ldlr-201ENSMUST00000034713 Fn1P11276 2477 aaKnown RBP6.96□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Krtap16-1A2A5X5 502 aa6.96□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Ubr5Q80TP3 2792 aa6.96□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Wfdc15aQ8BH89 80 aa6.96□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Defb13Q8R2I4 64 aa6.96□□□□□ -1.3
Ldlr-201ENSMUST00000034713 D730001G18RikA0A087WQU7 115 aa6.95□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Igkv3-4A0A140T8Q4 119 aa6.95□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Defb40Q70KL2 73 aa6.95□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Spata3Q9D9T6 193 aa6.95□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Igkv1-110A0A0B4J1I0 119 aa6.95□□□□□ -1.3
Ldlr-201ENSMUST00000034713 MobpQ9D2P8 170 aa6.95□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Gm10300Q8C8P7 189 aa6.94□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Sostdc1Q9CQN4 206 aa6.94□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Dchs2A0A0A6YW72 3346 aa6.94□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Prr13Q9CQJ5 137 aa6.94□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Coa6Q8BGD8 79 aa6.94□□□□□ -1.3
Ldlr-201ENSMUST00000034713 SycnQ8VCK7 134 aa6.94□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Znf706Q9D115 76 aaKnown RBP6.93□□□□□ -1.3
Ldlr-201ENSMUST00000034713 SnurfQ9WU12 71 aa6.93□□□□□ -1.3
Ldlr-201ENSMUST00000034713 Gm9903Q8C9Y8 129 aa6.93□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 619.7 ms