Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Gm25239-201ENSMUST00000174915 86 ntBASIC21.71■■□□□ 1.07
Igkv3-5A0A140T8M6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Igkv3-5A0A140T8M6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Igkv3-5A0A140T8M6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Igkv3-5A0A140T8M6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Igkv3-5A0A140T8M6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Igkv3-5A0A140T8M6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv3-5A0A140T8M6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv3-5A0A140T8M6 Gm15042-201ENSMUST00000120212 883 ntBASIC19.46■□□□□ 0.71
Igkv3-5A0A140T8M6 Psd-208ENSMUST00000224556 2034 ntBASIC19.42■□□□□ 0.7
Igkv3-5A0A140T8M6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv3-5A0A140T8M6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Igkv3-5A0A140T8M6 Gm15045-201ENSMUST00000117359 883 ntBASIC19.01■□□□□ 0.63
Igkv3-5A0A140T8M6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Igkv3-5A0A140T8M6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.89■□□□□ 0.61
Igkv3-5A0A140T8M6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Igkv3-5A0A140T8M6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv3-5A0A140T8M6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Igkv3-5A0A140T8M6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Igkv3-5A0A140T8M6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv3-5A0A140T8M6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv3-5A0A140T8M6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Igkv3-5A0A140T8M6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv3-5A0A140T8M6 Gm24109-201ENSMUST00000175489 103 ntBASIC18.57■□□□□ 0.56
Igkv3-5A0A140T8M6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv3-5A0A140T8M6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv3-5A0A140T8M6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv3-5A0A140T8M6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv3-5A0A140T8M6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv3-5A0A140T8M6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv3-5A0A140T8M6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv3-5A0A140T8M6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.31■□□□□ 0.52
Igkv3-5A0A140T8M6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv3-5A0A140T8M6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv3-5A0A140T8M6 Gm23366-201ENSMUST00000175022 89 ntBASIC18.26■□□□□ 0.51
Igkv3-5A0A140T8M6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv3-5A0A140T8M6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv3-5A0A140T8M6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.23■□□□□ 0.51
Igkv3-5A0A140T8M6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv3-5A0A140T8M6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv3-5A0A140T8M6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv3-5A0A140T8M6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv3-5A0A140T8M6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv3-5A0A140T8M6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv3-5A0A140T8M6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv3-5A0A140T8M6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18■□□□□ 0.47
Igkv3-5A0A140T8M6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv3-5A0A140T8M6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Igkv3-5A0A140T8M6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.96■□□□□ 0.47
Igkv3-5A0A140T8M6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv3-5A0A140T8M6 Gm10524-201ENSMUST00000181931 1893 ntBASIC17.89■□□□□ 0.45
Igkv3-5A0A140T8M6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv3-5A0A140T8M6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.88■□□□□ 0.45
Igkv3-5A0A140T8M6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17.88■□□□□ 0.45
Igkv3-5A0A140T8M6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.86■□□□□ 0.45
Igkv3-5A0A140T8M6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Igkv3-5A0A140T8M6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv3-5A0A140T8M6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv3-5A0A140T8M6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Igkv3-5A0A140T8M6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv3-5A0A140T8M6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv3-5A0A140T8M6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv3-5A0A140T8M6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv3-5A0A140T8M6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv3-5A0A140T8M6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv3-5A0A140T8M6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv3-5A0A140T8M6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Igkv3-5A0A140T8M6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv3-5A0A140T8M6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv3-5A0A140T8M6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv3-5A0A140T8M6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.44■□□□□ 0.38
Igkv3-5A0A140T8M6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv3-5A0A140T8M6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC17.39■□□□□ 0.37
Igkv3-5A0A140T8M6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv3-5A0A140T8M6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv3-5A0A140T8M6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv3-5A0A140T8M6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv3-5A0A140T8M6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv3-5A0A140T8M6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv3-5A0A140T8M6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv3-5A0A140T8M6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Igkv3-5A0A140T8M6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv3-5A0A140T8M6 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.26■□□□□ 0.35
Igkv3-5A0A140T8M6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Igkv3-5A0A140T8M6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Igkv3-5A0A140T8M6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv3-5A0A140T8M6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv3-5A0A140T8M6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv3-5A0A140T8M6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Igkv3-5A0A140T8M6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.18■□□□□ 0.34
Igkv3-5A0A140T8M6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv3-5A0A140T8M6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv3-5A0A140T8M6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv3-5A0A140T8M6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.14■□□□□ 0.33
Igkv3-5A0A140T8M6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv3-5A0A140T8M6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv3-5A0A140T8M6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv3-5A0A140T8M6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Igkv3-5A0A140T8M6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv3-5A0A140T8M6 Gm27325-201ENSMUST00000175467 74 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms