Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm25239-201ENSMUST00000174915 86 ntBASIC38.8■■■■□ 3.8
VcanQ62059 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
VcanQ62059 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
VcanQ62059 Gm24109-201ENSMUST00000175489 103 ntBASIC34.23■■■■□ 3.07
VcanQ62059 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
VcanQ62059 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
VcanQ62059 Gm15042-201ENSMUST00000120212 883 ntBASIC32.81■■■□□ 2.84
VcanQ62059 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
VcanQ62059 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
VcanQ62059 Gm15045-201ENSMUST00000117359 883 ntBASIC32.19■■■□□ 2.74
VcanQ62059 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.13■■■□□ 2.73
VcanQ62059 Gm23366-201ENSMUST00000175022 89 ntBASIC32.08■■■□□ 2.73
VcanQ62059 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
VcanQ62059 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
VcanQ62059 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.99■■■□□ 2.71
VcanQ62059 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.77■■■□□ 2.68
VcanQ62059 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.14■■■□□ 2.58
VcanQ62059 Gm25238-201ENSMUST00000174914 89 ntBASIC31.05■■■□□ 2.56
VcanQ62059 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
VcanQ62059 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
VcanQ62059 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
VcanQ62059 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
VcanQ62059 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
VcanQ62059 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
VcanQ62059 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
VcanQ62059 Gm25262-201ENSMUST00000174934 133 ntBASIC30.27■■■□□ 2.44
VcanQ62059 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
VcanQ62059 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.97■■■□□ 2.39
VcanQ62059 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
VcanQ62059 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.83■■■□□ 2.37
VcanQ62059 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.81■■■□□ 2.36
VcanQ62059 Gm26115-201ENSMUST00000175605 87 ntBASIC29.73■■■□□ 2.35
VcanQ62059 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.64■■■□□ 2.33
VcanQ62059 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
VcanQ62059 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
VcanQ62059 Gm8109-201ENSMUST00000194076 746 ntBASIC29.42■■■□□ 2.3
VcanQ62059 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.41■■■□□ 2.3
VcanQ62059 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
VcanQ62059 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
VcanQ62059 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.3■■■□□ 2.28
VcanQ62059 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
VcanQ62059 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.18■■■□□ 2.26
VcanQ62059 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
VcanQ62059 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
VcanQ62059 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.98■■■□□ 2.23
VcanQ62059 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.92■■■□□ 2.22
VcanQ62059 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
VcanQ62059 Rab21-202ENSMUST00000218831 843 ntBASIC28.82■■■□□ 2.2
VcanQ62059 Gm27325-201ENSMUST00000175467 74 ntBASIC28.81■■■□□ 2.2
VcanQ62059 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
VcanQ62059 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
VcanQ62059 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
VcanQ62059 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
VcanQ62059 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
VcanQ62059 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.62■■■□□ 2.17
VcanQ62059 Gm24804-201ENSMUST00000174982 85 ntBASIC28.6■■■□□ 2.17
VcanQ62059 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
VcanQ62059 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
VcanQ62059 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.51■■■□□ 2.15
VcanQ62059 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
VcanQ62059 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.45■■■□□ 2.14
VcanQ62059 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.43■■■□□ 2.14
VcanQ62059 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
VcanQ62059 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.35■■■□□ 2.13
VcanQ62059 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
VcanQ62059 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
VcanQ62059 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.24■■■□□ 2.11
VcanQ62059 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
VcanQ62059 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
VcanQ62059 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
VcanQ62059 Zfp131-205ENSMUST00000223812 663 ntBASIC28.09■■■□□ 2.09
VcanQ62059 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
VcanQ62059 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
VcanQ62059 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
VcanQ62059 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.02■■■□□ 2.08
VcanQ62059 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
VcanQ62059 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.97■■■□□ 2.07
VcanQ62059 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
VcanQ62059 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.88■■■□□ 2.05
VcanQ62059 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
VcanQ62059 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.83■■■□□ 2.05
VcanQ62059 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
VcanQ62059 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.78■■■□□ 2.04
VcanQ62059 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
VcanQ62059 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.04
VcanQ62059 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
VcanQ62059 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.72■■■□□ 2.03
VcanQ62059 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
VcanQ62059 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
VcanQ62059 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.6■■■□□ 2.01
VcanQ62059 Gm27322-201ENSMUST00000184007 104 ntBASIC27.58■■■□□ 2.01
VcanQ62059 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
VcanQ62059 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.57■■■□□ 2
VcanQ62059 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
VcanQ62059 Psd-208ENSMUST00000224556 2034 ntBASIC27.5■■□□□ 1.99
VcanQ62059 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
VcanQ62059 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.49■■□□□ 1.99
VcanQ62059 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
VcanQ62059 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
VcanQ62059 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.39■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms