Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Gm25239-201ENSMUST00000174915 86 ntBASIC36.15■■■■□ 3.38
Ubr5Q80TP3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
Ubr5Q80TP3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Ubr5Q80TP3 Gm24109-201ENSMUST00000175489 103 ntBASIC31.77■■■□□ 2.68
Ubr5Q80TP3 Gm15042-201ENSMUST00000120212 883 ntBASIC30.93■■■□□ 2.54
Ubr5Q80TP3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Ubr5Q80TP3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ubr5Q80TP3 Gm15045-201ENSMUST00000117359 883 ntBASIC30.36■■■□□ 2.45
Ubr5Q80TP3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Ubr5Q80TP3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Ubr5Q80TP3 Gm23366-201ENSMUST00000175022 89 ntBASIC29.92■■■□□ 2.38
Ubr5Q80TP3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.67■■■□□ 2.34
Ubr5Q80TP3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.47■■■□□ 2.31
Ubr5Q80TP3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ubr5Q80TP3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.3■■■□□ 2.28
Ubr5Q80TP3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ubr5Q80TP3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Ubr5Q80TP3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Ubr5Q80TP3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.88■■■□□ 2.21
Ubr5Q80TP3 Gm25238-201ENSMUST00000174914 89 ntBASIC28.81■■■□□ 2.2
Ubr5Q80TP3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ubr5Q80TP3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Ubr5Q80TP3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
Ubr5Q80TP3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Ubr5Q80TP3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
Ubr5Q80TP3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Ubr5Q80TP3 Gm25262-201ENSMUST00000174934 133 ntBASIC27.87■■■□□ 2.05
Ubr5Q80TP3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ubr5Q80TP3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ubr5Q80TP3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.77■■■□□ 2.04
Ubr5Q80TP3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Ubr5Q80TP3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.51■■□□□ 1.99
Ubr5Q80TP3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ubr5Q80TP3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.48■■□□□ 1.99
Ubr5Q80TP3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Ubr5Q80TP3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.44■■□□□ 1.98
Ubr5Q80TP3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.42■■□□□ 1.98
Ubr5Q80TP3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.35■■□□□ 1.97
Ubr5Q80TP3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ubr5Q80TP3 Gm26115-201ENSMUST00000175605 87 ntBASIC27.28■■□□□ 1.96
Ubr5Q80TP3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ubr5Q80TP3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.26■■□□□ 1.95
Ubr5Q80TP3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ubr5Q80TP3 Gm27325-201ENSMUST00000175467 74 ntBASIC27.14■■□□□ 1.93
Ubr5Q80TP3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ubr5Q80TP3 Gm8109-201ENSMUST00000194076 746 ntBASIC27.1■■□□□ 1.93
Ubr5Q80TP3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ubr5Q80TP3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.08■■□□□ 1.93
Ubr5Q80TP3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.08■■□□□ 1.92
Ubr5Q80TP3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ubr5Q80TP3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ubr5Q80TP3 Rab21-202ENSMUST00000218831 843 ntBASIC26.99■■□□□ 1.91
Ubr5Q80TP3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
Ubr5Q80TP3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Ubr5Q80TP3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.8■■□□□ 1.88
Ubr5Q80TP3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Ubr5Q80TP3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ubr5Q80TP3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.67■■□□□ 1.86
Ubr5Q80TP3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.67■■□□□ 1.86
Ubr5Q80TP3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.58■■□□□ 1.84
Ubr5Q80TP3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ubr5Q80TP3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ubr5Q80TP3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ubr5Q80TP3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ubr5Q80TP3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ubr5Q80TP3 Gm24804-201ENSMUST00000174982 85 ntBASIC26.3■■□□□ 1.8
Ubr5Q80TP3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ubr5Q80TP3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.22■■□□□ 1.79
Ubr5Q80TP3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.21■■□□□ 1.79
Ubr5Q80TP3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Ubr5Q80TP3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.2■■□□□ 1.79
Ubr5Q80TP3 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.19■■□□□ 1.78
Ubr5Q80TP3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubr5Q80TP3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ubr5Q80TP3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ubr5Q80TP3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.93■■□□□ 1.74
Ubr5Q80TP3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ubr5Q80TP3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ubr5Q80TP3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.9■■□□□ 1.74
Ubr5Q80TP3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ubr5Q80TP3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ubr5Q80TP3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.85■■□□□ 1.73
Ubr5Q80TP3 Zfp131-205ENSMUST00000223812 663 ntBASIC25.82■■□□□ 1.72
Ubr5Q80TP3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ubr5Q80TP3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ubr5Q80TP3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ubr5Q80TP3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ubr5Q80TP3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
Ubr5Q80TP3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ubr5Q80TP3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.75■■□□□ 1.71
Ubr5Q80TP3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ubr5Q80TP3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Ubr5Q80TP3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.7■■□□□ 1.71
Ubr5Q80TP3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.7■■□□□ 1.7
Ubr5Q80TP3 Gm27322-201ENSMUST00000184007 104 ntBASIC25.69■■□□□ 1.7
Ubr5Q80TP3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ubr5Q80TP3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.61■■□□□ 1.69
Ubr5Q80TP3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.61■■□□□ 1.69
Ubr5Q80TP3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Ubr5Q80TP3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.59■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms