RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Brwd1Q921C3 2304 aa12.93□□□□□ -0.34
Trim47-202ENSMUST00000106441 4930546C10RikE9Q4Y3 121 aa12.93□□□□□ -0.34
Trim47-202ENSMUST00000106441 Tfpi2O35536 230 aa12.93□□□□□ -0.34
Trim47-202ENSMUST00000106441 Plac8l1Q08EJ0 177 aa12.93□□□□□ -0.34
Trim47-202ENSMUST00000106441 Prss58Q8BW11 241 aa12.93□□□□□ -0.34
Trim47-202ENSMUST00000106441 Chchd7Q8K2Q5 85 aa12.93□□□□□ -0.34
Trim47-202ENSMUST00000106441 RetnQ99P87 114 aa12.93□□□□□ -0.34
Trim47-202ENSMUST00000106441 Trav13n-1A0A0G2JEU8 110 aa12.92□□□□□ -0.34
Trim47-202ENSMUST00000106441 Il19Q8CJ70 176 aa12.92□□□□□ -0.34
Trim47-202ENSMUST00000106441 Sostdc1Q9CQN4 206 aa12.92□□□□□ -0.34
Trim47-202ENSMUST00000106441 P01729 129 aa12.91□□□□□ -0.34
Trim47-202ENSMUST00000106441 Hivep3A2A884 2348 aa12.91□□□□□ -0.34
Trim47-202ENSMUST00000106441 Trav14d-3-dv8A0A075B619 120 aa12.91□□□□□ -0.34
Trim47-202ENSMUST00000106441 Lst1O08843 95 aa12.91□□□□□ -0.34
Trim47-202ENSMUST00000106441 CrygaP04345 174 aa12.91□□□□□ -0.34
Trim47-202ENSMUST00000106441 Defa1P11477 93 aa12.91□□□□□ -0.34
Trim47-202ENSMUST00000106441 Lage3Q9CR70 148 aa12.91□□□□□ -0.34
Trim47-202ENSMUST00000106441 Lypd5Q9D7Z7 256 aa12.9□□□□□ -0.34
Trim47-202ENSMUST00000106441 Spry2Q9QXV8 315 aa12.9□□□□□ -0.34
Trim47-202ENSMUST00000106441 Gm9513B3GLJ6 99 aa12.9□□□□□ -0.34
Trim47-202ENSMUST00000106441 Gm4861Q8C5A4 106 aa12.9□□□□□ -0.34
Trim47-202ENSMUST00000106441 CrygfQ9CXV3 174 aa12.89□□□□□ -0.35
Trim47-202ENSMUST00000106441 Notch3Q61982 2318 aa12.87□□□□□ -0.35
Trim47-202ENSMUST00000106441 1700011M02RikB1AX35 88 aa12.87□□□□□ -0.35
Trim47-202ENSMUST00000106441 PrlhG3UWC3 86 aa12.87□□□□□ -0.35
Trim47-202ENSMUST00000106441 MalO09198 153 aa12.87□□□□□ -0.35
Trim47-202ENSMUST00000106441 P01745 121 aa12.87□□□□□ -0.35
Trim47-202ENSMUST00000106441 Spink1P09036 80 aa12.87□□□□□ -0.35
Trim47-202ENSMUST00000106441 Xcl1P47993 114 aa12.87□□□□□ -0.35
Trim47-202ENSMUST00000106441 Gm10549Q3URY4 149 aa12.87□□□□□ -0.35
Trim47-202ENSMUST00000106441 Nop10Q9CQS2 64 aa12.87□□□□□ -0.35
Trim47-202ENSMUST00000106441 ApcQ61315 2845 aa12.87□□□□□ -0.35
Trim47-202ENSMUST00000106441 Trav11A0A0B4J1J9 114 aa12.87□□□□□ -0.35
Trim47-202ENSMUST00000106441 SelenowP63300 88 aa12.87□□□□□ -0.35
Trim47-202ENSMUST00000106441 PemtQ61907 199 aa12.87□□□□□ -0.35
Trim47-202ENSMUST00000106441 Gm7138L7N2C3 230 aa12.86□□□□□ -0.35
Trim47-202ENSMUST00000106441 Lyrm9Q3UN90 78 aa12.86□□□□□ -0.35
Trim47-202ENSMUST00000106441 Gm3238W4VSP7 230 aa12.86□□□□□ -0.35
Trim47-202ENSMUST00000106441 Defa16P50714 93 aa12.86□□□□□ -0.35
Trim47-202ENSMUST00000106441 Acyp1P56376 99 aa12.86□□□□□ -0.35
Trim47-202ENSMUST00000106441 Znf740Q6NZQ6 180 aa12.86□□□□□ -0.35
Trim47-202ENSMUST00000106441 5730596B20RikQ8BQ08 205 aa12.86□□□□□ -0.35
Trim47-202ENSMUST00000106441 Gm10300Q8C8P7 189 aa12.85□□□□□ -0.35
Trim47-202ENSMUST00000106441 Csdc2Q91YQ3 154 aa12.85□□□□□ -0.35
Trim47-202ENSMUST00000106441 Defa25Q5G864 92 aa12.84□□□□□ -0.35
Trim47-202ENSMUST00000106441 Defa2P28309 93 aa12.83□□□□□ -0.36
Trim47-202ENSMUST00000106441 Pglyrp4Q0VB07 374 aa12.83□□□□□ -0.36
Trim47-202ENSMUST00000106441 Ppp1r32Q148A4 427 aa12.83□□□□□ -0.36
Trim47-202ENSMUST00000106441 Rpl28P41105 137 aaKnown RBP12.82□□□□□ -0.36
Trim47-202ENSMUST00000106441 Trav9d-3A0A075B695 113 aa12.81□□□□□ -0.36
Trim47-202ENSMUST00000106441 Trav9d-4A0A0G2JG37 103 aa12.81□□□□□ -0.36
Trim47-202ENSMUST00000106441 GfyJ3KML8 504 aa12.81□□□□□ -0.36
Trim47-202ENSMUST00000106441 ScxQ64124 207 aa12.81□□□□□ -0.36
Trim47-202ENSMUST00000106441 Gm10772F7AIG4 85 aa12.8□□□□□ -0.36
Trim47-202ENSMUST00000106441 Gm7137J3QMW1 236 aa12.8□□□□□ -0.36
Trim47-202ENSMUST00000106441 Hist1h4aP62806 103 aaKnown RBP12.8□□□□□ -0.36
Trim47-202ENSMUST00000106441 Ighv1-49A0A0A6YWX2 117 aa12.79□□□□□ -0.36
Trim47-202ENSMUST00000106441 E130114P18RikF6S0S7 154 aa12.79□□□□□ -0.36
Trim47-202ENSMUST00000106441 Gpha2Q925Q5 128 aa12.79□□□□□ -0.36
Trim47-202ENSMUST00000106441 MobpQ9D2P8 170 aa12.79□□□□□ -0.36
Trim47-202ENSMUST00000106441 Tm2d2Q8R0I4 213 aa12.79□□□□□ -0.36
Trim47-202ENSMUST00000106441 Zfand2aQ9JII7 171 aa12.79□□□□□ -0.36
Trim47-202ENSMUST00000106441 Gm43218A0A0G2JGT0 114 aa12.77□□□□□ -0.36
Trim47-202ENSMUST00000106441 CrygdP04342 174 aa12.77□□□□□ -0.36
Trim47-202ENSMUST00000106441 Igf1P05017 153 aa12.77□□□□□ -0.36
Trim47-202ENSMUST00000106441 CrygeQ03740 174 aa12.77□□□□□ -0.36
Trim47-202ENSMUST00000106441 4930544G11RikQ9CR99 193 aa12.77□□□□□ -0.36
Trim47-202ENSMUST00000106441 Trav13-4-dv7A0A075B6C2 110 aa12.77□□□□□ -0.37
Trim47-202ENSMUST00000106441 PtprqP0C5E4 2300 aa12.77□□□□□ -0.37
Trim47-202ENSMUST00000106441 Ighv2-9-1A0A075B697 116 aa12.76□□□□□ -0.37
Trim47-202ENSMUST00000106441 Vmo1Q5SXG7 201 aa12.76□□□□□ -0.37
Trim47-202ENSMUST00000106441 Igkv4-72A0A0B4J1I4 117 aa12.76□□□□□ -0.37
Trim47-202ENSMUST00000106441 Rpl35aO55142 110 aa12.76□□□□□ -0.37
Trim47-202ENSMUST00000106441 Defb50Q6TU36 73 aa12.76□□□□□ -0.37
Trim47-202ENSMUST00000106441 4930524J08RikQ9CUJ5 163 aa12.76□□□□□ -0.37
Trim47-202ENSMUST00000106441 Klk11Q9QYN3 276 aa12.74□□□□□ -0.37
Trim47-202ENSMUST00000106441 Cox7a1P56392 80 aa12.74□□□□□ -0.37
Trim47-202ENSMUST00000106441 Ndufa12Q7TMF3 145 aaKnown RBP12.74□□□□□ -0.37
Trim47-202ENSMUST00000106441 Ntn5Q3UQ22 452 aa12.73□□□□□ -0.37
Trim47-202ENSMUST00000106441 4930519P11RikQ9CUJ8 166 aa12.73□□□□□ -0.37
Trim47-202ENSMUST00000106441 Gm16381A0A1Y7VKT9 73 aa12.72□□□□□ -0.37
Trim47-202ENSMUST00000106441 Gm10647E9Q8X0 124 aa12.72□□□□□ -0.37
Trim47-202ENSMUST00000106441 Rps28P62858 69 aaKnown RBP12.72□□□□□ -0.37
Trim47-202ENSMUST00000106441 FcgbpE9Q0B5 2583 aa12.72□□□□□ -0.37
Trim47-202ENSMUST00000106441 1810062G17RikG3X8Y2 129 aa12.71□□□□□ -0.37
Trim47-202ENSMUST00000106441 Spink4O35679 86 aa12.7□□□□□ -0.38
Trim47-202ENSMUST00000106441 Dnal4Q9DCM4 105 aa12.7□□□□□ -0.38
Trim47-202ENSMUST00000106441 TnxbO35452 4006 aa12.7□□□□□ -0.38
Trim47-202ENSMUST00000106441 Igkv1-117A0A140T8M0 119 aa12.7□□□□□ -0.38
Trim47-202ENSMUST00000106441 Prp2P05143 317 aa12.7□□□□□ -0.38
Trim47-202ENSMUST00000106441 Rpl18aP62717 176 aaKnown RBP12.69□□□□□ -0.38
Trim47-202ENSMUST00000106441 Pfn2Q9JJV2 140 aa12.69□□□□□ -0.38
Trim47-202ENSMUST00000106441 Ighv1-56A0A0A6YXG2 117 aa12.69□□□□□ -0.38
Trim47-202ENSMUST00000106441 7530416G11RikJ3QJX6 159 aa12.69□□□□□ -0.38
Trim47-202ENSMUST00000106441 P01755 137 aa12.69□□□□□ -0.38
Trim47-202ENSMUST00000106441 Sh2d1aO88890 126 aa12.68□□□□□ -0.38
Trim47-202ENSMUST00000106441 Ighv8-11A0A075B5X4 119 aa12.67□□□□□ -0.38
Trim47-202ENSMUST00000106441 Trav13d-4A0A0G2JFX3 110 aa12.67□□□□□ -0.38
Trim47-202ENSMUST00000106441 Psors1c2Q80ZC9 134 aa12.67□□□□□ -0.38
Trim47-202ENSMUST00000106441 D130052B06RikQ3UW13 202 aa12.66□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms