Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Xcl1P47993 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Xcl1P47993 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Xcl1P47993 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Xcl1P47993 Psd-208ENSMUST00000224556 2034 ntBASIC20.97■□□□□ 0.95
Xcl1P47993 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Xcl1P47993 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Xcl1P47993 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Xcl1P47993 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Xcl1P47993 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Xcl1P47993 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Xcl1P47993 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Xcl1P47993 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xcl1P47993 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xcl1P47993 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Xcl1P47993 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Xcl1P47993 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Xcl1P47993 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Xcl1P47993 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Xcl1P47993 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Xcl1P47993 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Xcl1P47993 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Xcl1P47993 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Xcl1P47993 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Xcl1P47993 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Xcl1P47993 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Xcl1P47993 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.34■□□□□ 0.69
Xcl1P47993 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Xcl1P47993 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xcl1P47993 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.1■□□□□ 0.65
Xcl1P47993 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.04■□□□□ 0.64
Xcl1P47993 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Xcl1P47993 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Xcl1P47993 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Xcl1P47993 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.87■□□□□ 0.61
Xcl1P47993 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xcl1P47993 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xcl1P47993 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xcl1P47993 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Xcl1P47993 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xcl1P47993 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Xcl1P47993 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Xcl1P47993 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Xcl1P47993 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Xcl1P47993 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Xcl1P47993 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Xcl1P47993 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.58■□□□□ 0.57
Xcl1P47993 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Xcl1P47993 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.5■□□□□ 0.55
Xcl1P47993 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Xcl1P47993 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Xcl1P47993 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Xcl1P47993 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Xcl1P47993 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Xcl1P47993 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Xcl1P47993 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Xcl1P47993 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Xcl1P47993 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Xcl1P47993 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Xcl1P47993 Gm25239-201ENSMUST00000174915 86 ntBASIC18.35■□□□□ 0.53
Xcl1P47993 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Xcl1P47993 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Xcl1P47993 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Xcl1P47993 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Xcl1P47993 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Xcl1P47993 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Xcl1P47993 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xcl1P47993 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.26■□□□□ 0.51
Xcl1P47993 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xcl1P47993 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.25■□□□□ 0.51
Xcl1P47993 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.24■□□□□ 0.51
Xcl1P47993 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xcl1P47993 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Xcl1P47993 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Xcl1P47993 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xcl1P47993 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Xcl1P47993 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Xcl1P47993 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Xcl1P47993 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Xcl1P47993 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Xcl1P47993 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Xcl1P47993 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Xcl1P47993 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.04■□□□□ 0.48
Xcl1P47993 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Xcl1P47993 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Xcl1P47993 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Xcl1P47993 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Xcl1P47993 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xcl1P47993 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Xcl1P47993 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Xcl1P47993 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Xcl1P47993 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Xcl1P47993 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xcl1P47993 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Xcl1P47993 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xcl1P47993 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Xcl1P47993 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Xcl1P47993 Zxda-201ENSMUST00000117281 2621 ntBASIC17.81■□□□□ 0.44
Xcl1P47993 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC17.8■□□□□ 0.44
Xcl1P47993 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms