Protein–RNA interactions for Protein: A0A075B5X4

Ighv8-11, Immunoglobulin heavy variable V8-11 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-11A0A075B5X4 Gm25239-201ENSMUST00000174915 86 ntBASIC25.85■■□□□ 1.73
Ighv8-11A0A075B5X4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ighv8-11A0A075B5X4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ighv8-11A0A075B5X4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ighv8-11A0A075B5X4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ighv8-11A0A075B5X4 Gm15042-201ENSMUST00000120212 883 ntBASIC22.86■■□□□ 1.25
Ighv8-11A0A075B5X4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Ighv8-11A0A075B5X4 Gm15045-201ENSMUST00000117359 883 ntBASIC22.36■■□□□ 1.17
Ighv8-11A0A075B5X4 Gm24109-201ENSMUST00000175489 103 ntBASIC22.27■■□□□ 1.16
Ighv8-11A0A075B5X4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ighv8-11A0A075B5X4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ighv8-11A0A075B5X4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ighv8-11A0A075B5X4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ighv8-11A0A075B5X4 Gm23366-201ENSMUST00000175022 89 ntBASIC21.66■■□□□ 1.06
Ighv8-11A0A075B5X4 Psd-208ENSMUST00000224556 2034 ntBASIC21.63■■□□□ 1.05
Ighv8-11A0A075B5X4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.63■■□□□ 1.05
Ighv8-11A0A075B5X4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ighv8-11A0A075B5X4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv8-11A0A075B5X4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ighv8-11A0A075B5X4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv8-11A0A075B5X4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ighv8-11A0A075B5X4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ighv8-11A0A075B5X4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ighv8-11A0A075B5X4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv8-11A0A075B5X4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv8-11A0A075B5X4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ighv8-11A0A075B5X4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv8-11A0A075B5X4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.1■□□□□ 0.97
Ighv8-11A0A075B5X4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ighv8-11A0A075B5X4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv8-11A0A075B5X4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.96■□□□□ 0.95
Ighv8-11A0A075B5X4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv8-11A0A075B5X4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv8-11A0A075B5X4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.83■□□□□ 0.93
Ighv8-11A0A075B5X4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv8-11A0A075B5X4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ighv8-11A0A075B5X4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.6■□□□□ 0.89
Ighv8-11A0A075B5X4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.48■□□□□ 0.87
Ighv8-11A0A075B5X4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv8-11A0A075B5X4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Ighv8-11A0A075B5X4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv8-11A0A075B5X4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv8-11A0A075B5X4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv8-11A0A075B5X4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ighv8-11A0A075B5X4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.31■□□□□ 0.84
Ighv8-11A0A075B5X4 Gm25238-201ENSMUST00000174914 89 ntBASIC20.3■□□□□ 0.84
Ighv8-11A0A075B5X4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ighv8-11A0A075B5X4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ighv8-11A0A075B5X4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.23■□□□□ 0.83
Ighv8-11A0A075B5X4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ighv8-11A0A075B5X4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv8-11A0A075B5X4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ighv8-11A0A075B5X4 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.11■□□□□ 0.81
Ighv8-11A0A075B5X4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv8-11A0A075B5X4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv8-11A0A075B5X4 Gm27325-201ENSMUST00000175467 74 ntBASIC20.06■□□□□ 0.8
Ighv8-11A0A075B5X4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.01■□□□□ 0.79
Ighv8-11A0A075B5X4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv8-11A0A075B5X4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv8-11A0A075B5X4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Ighv8-11A0A075B5X4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv8-11A0A075B5X4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.94■□□□□ 0.78
Ighv8-11A0A075B5X4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv8-11A0A075B5X4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ighv8-11A0A075B5X4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Ighv8-11A0A075B5X4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv8-11A0A075B5X4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ighv8-11A0A075B5X4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv8-11A0A075B5X4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv8-11A0A075B5X4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv8-11A0A075B5X4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.78■□□□□ 0.76
Ighv8-11A0A075B5X4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.76■□□□□ 0.75
Ighv8-11A0A075B5X4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv8-11A0A075B5X4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv8-11A0A075B5X4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.75■□□□□ 0.75
Ighv8-11A0A075B5X4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv8-11A0A075B5X4 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.68■□□□□ 0.74
Ighv8-11A0A075B5X4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv8-11A0A075B5X4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ighv8-11A0A075B5X4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ighv8-11A0A075B5X4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv8-11A0A075B5X4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.56■□□□□ 0.72
Ighv8-11A0A075B5X4 Rab21-202ENSMUST00000218831 843 ntBASIC19.55■□□□□ 0.72
Ighv8-11A0A075B5X4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv8-11A0A075B5X4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv8-11A0A075B5X4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.46■□□□□ 0.71
Ighv8-11A0A075B5X4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ighv8-11A0A075B5X4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv8-11A0A075B5X4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ighv8-11A0A075B5X4 Gm25262-201ENSMUST00000174934 133 ntBASIC19.36■□□□□ 0.69
Ighv8-11A0A075B5X4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv8-11A0A075B5X4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv8-11A0A075B5X4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.34■□□□□ 0.69
Ighv8-11A0A075B5X4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv8-11A0A075B5X4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv8-11A0A075B5X4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv8-11A0A075B5X4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv8-11A0A075B5X4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ighv8-11A0A075B5X4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv8-11A0A075B5X4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms