Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm25239-201ENSMUST00000174915 86 ntBASIC29.54■■■□□ 2.32
Notch3Q61982 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Notch3Q61982 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Notch3Q61982 Gm24109-201ENSMUST00000175489 103 ntBASIC25.76■■□□□ 1.71
Notch3Q61982 Gm15042-201ENSMUST00000120212 883 ntBASIC25.43■■□□□ 1.66
Notch3Q61982 Gm15045-201ENSMUST00000117359 883 ntBASIC24.94■■□□□ 1.58
Notch3Q61982 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Notch3Q61982 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Notch3Q61982 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Notch3Q61982 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Notch3Q61982 Gm23366-201ENSMUST00000175022 89 ntBASIC24.48■■□□□ 1.51
Notch3Q61982 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Notch3Q61982 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.06■■□□□ 1.44
Notch3Q61982 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.93■■□□□ 1.42
Notch3Q61982 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Notch3Q61982 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Notch3Q61982 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Notch3Q61982 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
Notch3Q61982 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Notch3Q61982 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Notch3Q61982 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Notch3Q61982 Gm25238-201ENSMUST00000174914 89 ntBASIC23.42■■□□□ 1.34
Notch3Q61982 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.38■■□□□ 1.33
Notch3Q61982 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Notch3Q61982 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Notch3Q61982 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Notch3Q61982 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Notch3Q61982 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.14■■□□□ 1.29
Notch3Q61982 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Notch3Q61982 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Notch3Q61982 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Notch3Q61982 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Notch3Q61982 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
Notch3Q61982 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.79■■□□□ 1.24
Notch3Q61982 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Notch3Q61982 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Notch3Q61982 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.61■■□□□ 1.21
Notch3Q61982 Psd-208ENSMUST00000224556 2034 ntBASIC22.52■■□□□ 1.2
Notch3Q61982 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.52■■□□□ 1.2
Notch3Q61982 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Notch3Q61982 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Notch3Q61982 Gm25262-201ENSMUST00000174934 133 ntBASIC22.43■■□□□ 1.18
Notch3Q61982 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Notch3Q61982 Gm27325-201ENSMUST00000175467 74 ntBASIC22.37■■□□□ 1.17
Notch3Q61982 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.32■■□□□ 1.16
Notch3Q61982 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Notch3Q61982 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Notch3Q61982 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Notch3Q61982 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Notch3Q61982 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.2■■□□□ 1.14
Notch3Q61982 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.18■■□□□ 1.14
Notch3Q61982 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.12■■□□□ 1.13
Notch3Q61982 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.09■■□□□ 1.13
Notch3Q61982 Gm26115-201ENSMUST00000175605 87 ntBASIC22.07■■□□□ 1.12
Notch3Q61982 Rab21-202ENSMUST00000218831 843 ntBASIC22.04■■□□□ 1.12
Notch3Q61982 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.98■■□□□ 1.11
Notch3Q61982 Gm8109-201ENSMUST00000194076 746 ntBASIC21.93■■□□□ 1.1
Notch3Q61982 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Notch3Q61982 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Notch3Q61982 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Notch3Q61982 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Notch3Q61982 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Notch3Q61982 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Notch3Q61982 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.87■■□□□ 1.09
Notch3Q61982 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.8■■□□□ 1.08
Notch3Q61982 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Notch3Q61982 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Notch3Q61982 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Notch3Q61982 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.76■■□□□ 1.07
Notch3Q61982 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Notch3Q61982 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Notch3Q61982 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Notch3Q61982 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Notch3Q61982 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.66■■□□□ 1.06
Notch3Q61982 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Notch3Q61982 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.63■■□□□ 1.05
Notch3Q61982 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.6■■□□□ 1.05
Notch3Q61982 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Notch3Q61982 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Notch3Q61982 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Notch3Q61982 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Notch3Q61982 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Notch3Q61982 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Notch3Q61982 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Notch3Q61982 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Notch3Q61982 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Notch3Q61982 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.37■■□□□ 1.01
Notch3Q61982 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.37■■□□□ 1.01
Notch3Q61982 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Notch3Q61982 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.27■□□□□ 0.99
Notch3Q61982 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Notch3Q61982 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Notch3Q61982 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Notch3Q61982 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.18■□□□□ 0.98
Notch3Q61982 Gm24804-201ENSMUST00000174982 85 ntBASIC21.17■□□□□ 0.98
Notch3Q61982 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Notch3Q61982 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Notch3Q61982 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.15■□□□□ 0.98
Notch3Q61982 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.15■□□□□ 0.98
Notch3Q61982 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms