RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Defa16P50714 93 aa6.91□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 5730596B20RikQ8BQ08 205 aa6.91□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Col7a1Q63870 2944 aa6.91□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Gm28539A0A087WSL9 92 aa6.91□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Smim20D3Z7Q2 69 aa6.91□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Cops9Q3U898 57 aa6.91□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Igkv1-117A0A140T8M0 119 aa6.9□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Gm10735Q3US96 136 aa6.9□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Gm10772F7AIG4 85 aa6.9□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 GfyJ3KML8 504 aa6.9□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Gm10577Q3UDV9 132 aa6.9□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Vmo1Q5SXG7 201 aa6.89□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Trav13-1A0A075B644 110 aa6.89□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Lage3Q9CR70 148 aa6.89□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 9430069I07RikQ9CX21 111 aa6.89□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Ss18l2Q9D174 77 aa6.89□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 SbsponQ3UPR9 264 aa6.88□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Spata25Q9DA57 226 aa6.88□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Trav13n-2A0A0G2JF93 110 aa6.88□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Cox6b1P56391 86 aaKnown RBP6.88□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 4930524J08RikQ9CUJ5 163 aa6.88□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Gpha2Q925Q5 128 aa6.87□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Gm867A0A1W2P7T4 151 aa6.87□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 D130052B06RikQ3UW13 202 aa6.87□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Defb50Q6TU36 73 aa6.87□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Defa2P28309 93 aa6.86□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Gm10549Q3URY4 149 aa6.86□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Igkv6-13A0A0G2JGY3 119 aa6.86□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Defb2P82020 71 aa6.86□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Defa25Q5G864 92 aa6.86□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 MobpQ9D2P8 170 aa6.86□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Pla2g1bQ9Z0Y2 146 aa6.86□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Ank2Q8C8R3 3898 aa6.86□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Rpl28P41105 137 aaKnown RBP6.85□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Zfand2aQ9JII7 171 aa6.85□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Apoc4Q61268 124 aa6.85□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 BB014433Q8C5R5 389 aa6.85□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Igkv1-99F6XWB2 120 aa6.85□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Chchd7Q8K2Q5 85 aa6.85□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Tm2d2Q8R0I4 213 aa6.85□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Gm7102J3QQ10 178 aa6.84□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Prss58Q8BW11 241 aa6.84□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Gm16381A0A1Y7VKT9 73 aa6.84□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Xcl1P47993 114 aa6.84□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Tex15F8VPN2 2785 aa6.84□□□□□ -1.31
Ccdc40-202ENSMUST00000053440 Il19Q8CJ70 176 aa6.84□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Dnal4Q9DCM4 105 aa6.84□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Mast4Q811L6 2618 aa6.83□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Ighv8-11A0A075B5X4 119 aa6.83□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Krtap16-1A2A5X5 502 aa6.83□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Gm3250E9Q1M3 230 aa6.83□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Igf1P05017 153 aa6.83□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Ly6c2P0CW03 131 aa6.83□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Lyrm9Q3UN90 78 aa6.83□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Hbb-b2P02089 147 aa6.83□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Igkv4-72A0A0B4J1I4 117 aa6.83□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Trav13-2A0A075B649 110 aa6.82□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Dand5Q76LW6 185 aa6.82□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Cd99Q8VCN6 175 aa6.82□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 2010109I03RikQ9CQ11 111 aa6.81□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Gm20726G3UX18 150 aa6.81□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Ighv2-9-1A0A075B697 116 aa6.8□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Igkv4-53A0A0G2JFC6 119 aa6.8□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Leap2Q91V13 76 aa6.8□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Igkv4-54A0A0G2JES9 117 aa6.8□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Zfp951A0A087WRH0 451 aa6.79□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Defa20Q45VN2 95 aa6.79□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Gm5142Q8C5X9 133 aa6.79□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 4930535I16RikQ9CUI2 172 aa6.79□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 SmcpP15265 143 aa6.79□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Acyp1P56376 99 aa6.79□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Rpl39lQ9CQD0 51 aa6.79□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Znf414Q9DCK4 299 aa6.78□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Igkv2-109A0A075B5K6 120 aa6.78□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Klk12B2RVZ0 247 aa6.78□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 MifP34884 115 aaKnown RBP6.78□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 PrcdQ00LT2 53 aa6.78□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Gm3618D3Z4P5 127 aa6.77□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 Gm2916Q9D9B9 127 aa6.77□□□□□ -1.32
Ccdc40-202ENSMUST00000053440 1810062G17RikG3X8Y2 129 aa6.77□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Odf3l2Q3TZ65 277 aa6.77□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Spink4O35679 86 aa6.77□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Nbeal2Q6ZQA0 2742 aa6.77□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Gm9767G3X930 207 aa6.76□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 4930519P11RikQ9CUJ8 166 aa6.76□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Gm3233E9Q2H5 230 aa6.76□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Wfdc12Q9JHY3 85 aa6.76□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 PolqQ8CGS6 2544 aa6.76□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Ighv1-56A0A0A6YXG2 117 aa6.76□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 SvipQ3UZP4 77 aa6.76□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Trav9n-4A0A075B631 113 aa6.75□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Ifitm6A0A1B0GS75 124 aa6.75□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Defa7P50705 93 aa6.75□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Smim26Q3V460 107 aa6.75□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Naa38Q9D2U5 125 aa6.75□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Hist1h4aP62806 103 aaKnown RBP6.74□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 ScxQ64124 207 aa6.74□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Cystm1Q8K353 104 aa6.74□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Igkv8-18A0A0B4J1J3 123 aa6.74□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Gm43218A0A0G2JGT0 114 aa6.74□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms