RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 NischQ80TM9 1593 aa18.22■□□□□ 0.51
Ccdc40-202ENSMUST00000053440 Abcc9P70170 1546 aa17.64■□□□□ 0.41
Ccdc40-202ENSMUST00000053440 Gm35339A0A140LHH9 1649 aa17.58■□□□□ 0.41
Ccdc40-202ENSMUST00000053440 Rhox8Q6VSS7 320 aa17.43■□□□□ 0.38
Ccdc40-202ENSMUST00000053440 Abcc8B2RUS7 1588 aa17.19■□□□□ 0.34
Ccdc40-202ENSMUST00000053440 Rtl1Q7M732 1744 aa16.92■□□□□ 0.3
Ccdc40-202ENSMUST00000053440 Ccdc180J3QNE4 1664 aa16.75■□□□□ 0.27
Ccdc40-202ENSMUST00000053440 Zcchc6Q5BLK4 1491 aaKnown RBP16.39■□□□□ 0.21
Ccdc40-202ENSMUST00000053440 Rpgrip1Q9EPQ2 1331 aa16.32■□□□□ 0.2
Ccdc40-202ENSMUST00000053440 Ehmt2Q9Z148 1263 aaKnown RBP16.25■□□□□ 0.19
Ccdc40-202ENSMUST00000053440 Ccdc136Q3TVA9 1136 aa16.15■□□□□ 0.18
Ccdc40-202ENSMUST00000053440 Acin1Q9JIX8 1338 aaKnown RBP16.1■□□□□ 0.17
Ccdc40-202ENSMUST00000053440 Rb1cc1Q9ESK9 1588 aa15.99■□□□□ 0.15
Ccdc40-202ENSMUST00000053440 HrcG5E8J6 738 aa15.99■□□□□ 0.15
Ccdc40-202ENSMUST00000053440 ScribQ80U72 1612 aa15.94■□□□□ 0.14
Ccdc40-202ENSMUST00000053440 Dcaf1Q80TR8 1506 aa15.93■□□□□ 0.14
Ccdc40-202ENSMUST00000053440 Trim41Q5NCC3 630 aa15.81■□□□□ 0.12
Ccdc40-202ENSMUST00000053440 Baz1aO88379 1555 aa15.76■□□□□ 0.11
Ccdc40-202ENSMUST00000053440 Kdm5dQ62240 1548 aa15.72■□□□□ 0.11
Ccdc40-202ENSMUST00000053440 Pcgf6Q99NA9 353 aa15.64■□□□□ 0.09
Ccdc40-202ENSMUST00000053440 NacadQ5SWP3 1504 aa15.5■□□□□ 0.07
Ccdc40-202ENSMUST00000053440 Cep164Q5DU05 1446 aa15.48■□□□□ 0.07
Ccdc40-202ENSMUST00000053440 Cngb1E1AZ71 1325 aa15.42■□□□□ 0.06
Ccdc40-202ENSMUST00000053440 Smarca2Q6DIC0 1577 aa15.41■□□□□ 0.06
Ccdc40-202ENSMUST00000053440 Gab3Q8BSM5 595 aa15.41■□□□□ 0.06
Ccdc40-202ENSMUST00000053440 Supt5hO55201 1082 aaKnown RBP15.38■□□□□ 0.05
Ccdc40-202ENSMUST00000053440 Chic1Q8CBW7 227 aa15.34■□□□□ 0.05
Ccdc40-202ENSMUST00000053440 Rsf1E9PWW9 1441 aaKnown RBP15.28■□□□□ 0.04
Ccdc40-202ENSMUST00000053440 Crybg2B7ZCC2 1516 aa15.27■□□□□ 0.04
Ccdc40-202ENSMUST00000053440 Zeb1Q64318 1117 aa15.22■□□□□ 0.03
Ccdc40-202ENSMUST00000053440 Sycp2Q9CUU3 1500 aa15.16■□□□□ 0.02
Ccdc40-202ENSMUST00000053440 Ccdc88bQ4QRL3 1481 aa15.15■□□□□ 0.02
Ccdc40-202ENSMUST00000053440 Brd4Q9ESU6 1400 aaKnown RBP15.12■□□□□ 0.01
Ccdc40-202ENSMUST00000053440 Cecr2E9Q2Z1 1453 aa15.11■□□□□ 0.01
Ccdc40-202ENSMUST00000053440 Mier1Q5UAK0 511 aa15.09■□□□□ 0.01
Ccdc40-202ENSMUST00000053440 Golga3P55937 1487 aa15.05■□□□□ 0
Ccdc40-202ENSMUST00000053440 Esf1Q3V1V3 845 aaKnown RBP15.05■□□□□ 0
Ccdc40-202ENSMUST00000053440 Neurod1Q60867 357 aa15.04■□□□□ -0
Ccdc40-202ENSMUST00000053440 NefmP08553 848 aa15.02□□□□□ -0.01
Ccdc40-202ENSMUST00000053440 Synj1Q8CHC4 1574 aa15□□□□□ -0.01
Ccdc40-202ENSMUST00000053440 Sall2Q9QX96 1004 aa14.93□□□□□ -0.02
Ccdc40-202ENSMUST00000053440 UbtfP25976 765 aaKnown RBP14.89□□□□□ -0.03
Ccdc40-202ENSMUST00000053440 CftrP26361 1476 aa14.86□□□□□ -0.03
Ccdc40-202ENSMUST00000053440 BicraF8VPZ9 1578 aa14.82□□□□□ -0.04
Ccdc40-202ENSMUST00000053440 Wdr66E9Q743 1299 aa14.79□□□□□ -0.04
Ccdc40-202ENSMUST00000053440 Myt1lP97500 1187 aa14.78□□□□□ -0.04
Ccdc40-202ENSMUST00000053440 Top2bQ64511 1612 aa14.76□□□□□ -0.05
Ccdc40-202ENSMUST00000053440 Cc2d2aQ8CFW7 1633 aa14.73□□□□□ -0.05
Ccdc40-202ENSMUST00000053440 Aebp2Q9Z248 504 aaKnown RBP14.71□□□□□ -0.05
Ccdc40-202ENSMUST00000053440 Las1lA2BE28 776 aaKnown RBP14.71□□□□□ -0.05
Ccdc40-202ENSMUST00000053440 Ppargc1bQ8VHJ7 1014 aa14.71□□□□□ -0.05
Ccdc40-202ENSMUST00000053440 Cttnbp2B9EJA2 1648 aa14.7□□□□□ -0.06
Ccdc40-202ENSMUST00000053440 Rapgef2Q8CHG7 1496 aa14.65□□□□□ -0.06
Ccdc40-202ENSMUST00000053440 Npm2Q80W85 207 aa14.63□□□□□ -0.07
Ccdc40-202ENSMUST00000053440 Cep162Q6ZQ06 1403 aa14.59□□□□□ -0.07
Ccdc40-202ENSMUST00000053440 Fmn1Q05860 1466 aa14.58□□□□□ -0.08
Ccdc40-202ENSMUST00000053440 Plekhg3Q4VAC9 1341 aa14.57□□□□□ -0.08
Ccdc40-202ENSMUST00000053440 Anks4bQ8K3X6 423 aa14.57□□□□□ -0.08
Ccdc40-202ENSMUST00000053440 Smarca4Q3TKT4 1613 aaKnown RBP14.57□□□□□ -0.08
Ccdc40-202ENSMUST00000053440 Csrnp3P59055 597 aa14.57□□□□□ -0.08
Ccdc40-202ENSMUST00000053440 Top2aQ01320 1528 aaKnown RBP14.55□□□□□ -0.08
Ccdc40-202ENSMUST00000053440 ClspnQ80YR7 1315 aa14.53□□□□□ -0.08
Ccdc40-202ENSMUST00000053440 Nop58Q6DFW4 536 aaKnown RBP14.52□□□□□ -0.09
Ccdc40-202ENSMUST00000053440 Cdk11bP24788 784 aaKnown RBP14.51□□□□□ -0.09
Ccdc40-202ENSMUST00000053440 TonslQ6NZL6 1363 aa14.51□□□□□ -0.09
Ccdc40-202ENSMUST00000053440 1700123L14RikQ3V2K7 440 aa14.5□□□□□ -0.09
Ccdc40-202ENSMUST00000053440 Clip1Q922J3 1391 aa14.49□□□□□ -0.09
Ccdc40-202ENSMUST00000053440 Ap3b1Q9Z1T1 1105 aa14.39□□□□□ -0.11
Ccdc40-202ENSMUST00000053440 Iqgap2Q3UQ44 1575 aa14.38□□□□□ -0.11
Ccdc40-202ENSMUST00000053440 Eid3Q3V124 375 aa14.35□□□□□ -0.11
Ccdc40-202ENSMUST00000053440 Il27Q8K3I6 234 aa14.35□□□□□ -0.11
Ccdc40-202ENSMUST00000053440 Gm38655A0A286YDK6 273 aa14.33□□□□□ -0.12
Ccdc40-202ENSMUST00000053440 Ncapd3Q6ZQK0 1506 aa14.32□□□□□ -0.12
Ccdc40-202ENSMUST00000053440 Eif4g1Q6NZJ6 1600 aaKnown RBP14.29□□□□□ -0.12
Ccdc40-202ENSMUST00000053440 PtprkP35822 1457 aa14.26□□□□□ -0.13
Ccdc40-202ENSMUST00000053440 Arhgap35Q91YM2 1499 aa14.26□□□□□ -0.13
Ccdc40-202ENSMUST00000053440 Arap1Q4LDD4 1452 aa14.23□□□□□ -0.13
Ccdc40-202ENSMUST00000053440 Eea1Q8BL66 1411 aa14.22□□□□□ -0.13
Ccdc40-202ENSMUST00000053440 Aplp2Q06335 707 aa14.22□□□□□ -0.13
Ccdc40-202ENSMUST00000053440 Atad2bE9Q166 1460 aaKnown RBP14.21□□□□□ -0.13
Ccdc40-202ENSMUST00000053440 Setd5Q5XJV7 1441 aa14.2□□□□□ -0.14
Ccdc40-202ENSMUST00000053440 Mapk8ip2Q9ERE9 830 aa14.18□□□□□ -0.14
Ccdc40-202ENSMUST00000053440 TnnQ80Z71 1560 aa14.17□□□□□ -0.14
Ccdc40-202ENSMUST00000053440 CenpbP27790 599 aa14.16□□□□□ -0.14
Ccdc40-202ENSMUST00000053440 NrkQ9R0G8 1455 aa14.13□□□□□ -0.15
Ccdc40-202ENSMUST00000053440 Kif15Q6P9L6 1387 aa14.13□□□□□ -0.15
Ccdc40-202ENSMUST00000053440 Arhgef5E9Q7D5 1581 aa14.12□□□□□ -0.15
Ccdc40-202ENSMUST00000053440 Fam50aQ9WV03 339 aaKnown RBP14.12□□□□□ -0.15
Ccdc40-202ENSMUST00000053440 Ccdc18Q640L5 1455 aa14.09□□□□□ -0.15
Ccdc40-202ENSMUST00000053440 Pds5bQ4VA53 1446 aaKnown RBP14.09□□□□□ -0.15
Ccdc40-202ENSMUST00000053440 Kdm5bQ80Y84 1544 aa14.09□□□□□ -0.15
Ccdc40-202ENSMUST00000053440 BlmO88700 1416 aa14.08□□□□□ -0.15
Ccdc40-202ENSMUST00000053440 Lmod2Q3UHZ5 550 aa14.08□□□□□ -0.16
Ccdc40-202ENSMUST00000053440 Frmpd1A2AKB4 1549 aa14.08□□□□□ -0.16
Ccdc40-202ENSMUST00000053440 Shroom4Q1W617 1475 aa14.07□□□□□ -0.16
Ccdc40-202ENSMUST00000053440 Hnrnpul2Q00PI9 745 aaKnown RBP14.07□□□□□ -0.16
Ccdc40-202ENSMUST00000053440 Baz1bQ9Z277 1479 aa14.04□□□□□ -0.16
Ccdc40-202ENSMUST00000053440 AqrQ8CFQ3 1481 aaKnown RBP14.04□□□□□ -0.16
Ccdc40-202ENSMUST00000053440 SafbD3YXK2 937 aaKnown RBP14.03□□□□□ -0.16
Ccdc40-202ENSMUST00000053440 NclP09405 707 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 6.4 ms