RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Glrp1E9Q9S8 174 aa17.05■□□□□ 0.32
Ubp1-203ENSMUST00000116492 P01823 113 aa17.05■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Ndufa3Q9CQ91 84 aa17.05■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Spink1P09036 80 aa17.04■□□□□ 0.32
Ubp1-203ENSMUST00000116492 CirbpP60824 172 aaKnown RBP17.04■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Trav3-1Q5R1I8 114 aa17.04■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Krtap16-1A2A5X5 502 aa17.03■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Epg5Q80TA9 2572 aa17.03■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Krtap24-1G3X9A2 248 aa17.03■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Tfpi2O35536 230 aa17.03■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Nhlrc1Q8BR37 401 aa17.03■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Wnk1P83741 2377 aa17.03■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Usp9yF8VPU6 2556 aa17.02■□□□□ 0.32
Ubp1-203ENSMUST00000116492 4930432M17RikQ3V0W9 174 aa17.02■□□□□ 0.32
Ubp1-203ENSMUST00000116492 BC048562Q80ZQ7 204 aa17.02■□□□□ 0.32
Ubp1-203ENSMUST00000116492 1700010B08RikQ9DAI7 102 aa17.02■□□□□ 0.32
Ubp1-203ENSMUST00000116492 MtorQ9JLN9 2549 aa17.02■□□□□ 0.32
Ubp1-203ENSMUST00000116492 Ighv1-62-1A0A075B5U3 116 aa17.01■□□□□ 0.31
Ubp1-203ENSMUST00000116492 Cox6b1P56391 86 aaKnown RBP17■□□□□ 0.31
Ubp1-203ENSMUST00000116492 Defb47Q30KN1 79 aa17■□□□□ 0.31
Ubp1-203ENSMUST00000116492 SbsponQ3UPR9 264 aa17■□□□□ 0.31
Ubp1-203ENSMUST00000116492 4930415O20RikQ8CDT5 131 aa17■□□□□ 0.31
Ubp1-203ENSMUST00000116492 4930546C10RikE9Q4Y3 121 aa16.99■□□□□ 0.31
Ubp1-203ENSMUST00000116492 Gm10772F7AIG4 85 aa16.99■□□□□ 0.31
Ubp1-203ENSMUST00000116492 P01745 121 aa16.98■□□□□ 0.31
Ubp1-203ENSMUST00000116492 9430069I07RikQ9CX21 111 aa16.98■□□□□ 0.31
Ubp1-203ENSMUST00000116492 Gm10135F6TEE5 83 aa16.97■□□□□ 0.31
Ubp1-203ENSMUST00000116492 Zc2hc1bQ9D534 172 aa16.97■□□□□ 0.31
Ubp1-203ENSMUST00000116492 Ighv1-49A0A0A6YWX2 117 aa16.97■□□□□ 0.31
Ubp1-203ENSMUST00000116492 Cox7a1P56392 80 aa16.96■□□□□ 0.3
Ubp1-203ENSMUST00000116492 Cep192E9Q4Y4 2514 aaKnown RBP16.95■□□□□ 0.3
Ubp1-203ENSMUST00000116492 Gm43218A0A0G2JGT0 114 aa16.95■□□□□ 0.3
Ubp1-203ENSMUST00000116492 BatfO35284 125 aa16.95■□□□□ 0.3
Ubp1-203ENSMUST00000116492 Cops9Q3U898 57 aa16.94■□□□□ 0.3
Ubp1-203ENSMUST00000116492 Lgals4Q8K419 326 aa16.94■□□□□ 0.3
Ubp1-203ENSMUST00000116492 Zfp462B1AWL2 2495 aaKnown RBP16.94■□□□□ 0.3
Ubp1-203ENSMUST00000116492 Insl3O09107 122 aa16.94■□□□□ 0.3
Ubp1-203ENSMUST00000116492 Helz2E9QAM5 2947 aaKnown RBP16.94■□□□□ 0.3
Ubp1-203ENSMUST00000116492 Igkv4-72A0A0B4J1I4 117 aa16.93■□□□□ 0.3
Ubp1-203ENSMUST00000116492 NipblQ6KCD5 2798 aaKnown RBP16.93■□□□□ 0.3
Ubp1-203ENSMUST00000116492 Gm28269A0A087WSG3 125 aa16.93■□□□□ 0.3
Ubp1-203ENSMUST00000116492 Trav13n-1A0A0G2JEU8 110 aa16.92■□□□□ 0.3
Ubp1-203ENSMUST00000116492 P01896 185 aa16.92■□□□□ 0.3
Ubp1-203ENSMUST00000116492 Pla2g1bQ9Z0Y2 146 aa16.91■□□□□ 0.3
Ubp1-203ENSMUST00000116492 Spink4O35679 86 aa16.91■□□□□ 0.3
Ubp1-203ENSMUST00000116492 Ppp1r32Q148A4 427 aa16.91■□□□□ 0.3
Ubp1-203ENSMUST00000116492 RetnQ99P87 114 aa16.91■□□□□ 0.3
Ubp1-203ENSMUST00000116492 Igfn1Q3KNY0 2849 aa16.91■□□□□ 0.3
Ubp1-203ENSMUST00000116492 MobpQ9D2P8 170 aa16.9■□□□□ 0.3
Ubp1-203ENSMUST00000116492 C2cd3Q52KB6 2323 aa16.89■□□□□ 0.29
Ubp1-203ENSMUST00000116492 CenpwQ3URR0 86 aa16.89■□□□□ 0.29
Ubp1-203ENSMUST00000116492 Gm29423A0A087WRM1 55 aa16.88■□□□□ 0.29
Ubp1-203ENSMUST00000116492 Gm7257D3YX25 99 aa16.88■□□□□ 0.29
Ubp1-203ENSMUST00000116492 Gm11444F6QMA6 170 aa16.87■□□□□ 0.29
Ubp1-203ENSMUST00000116492 Gm11020F6ZGD5 61 aa16.87■□□□□ 0.29
Ubp1-203ENSMUST00000116492 Sh2d1aO88890 126 aa16.87■□□□□ 0.29
Ubp1-203ENSMUST00000116492 Gm10577Q3UDV9 132 aa16.87■□□□□ 0.29
Ubp1-203ENSMUST00000116492 Cdip1Q9DB75 208 aa16.87■□□□□ 0.29
Ubp1-203ENSMUST00000116492 Cox6cQ9CPQ1 76 aa16.85■□□□□ 0.29
Ubp1-203ENSMUST00000116492 Sostdc1Q9CQN4 206 aa16.85■□□□□ 0.29
Ubp1-203ENSMUST00000116492 Smrp1Q2MH31 260 aa16.84■□□□□ 0.29
Ubp1-203ENSMUST00000116492 Spata45Q9CVW4 97 aa16.84■□□□□ 0.29
Ubp1-203ENSMUST00000116492 Ss18l2Q9D174 77 aa16.83■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Trav13-4-dv7A0A075B6C2 110 aa16.82■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Trav11A0A0B4J1J9 114 aa16.82■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Eif4ebp3Q80VV3 101 aa16.82■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Scgb1b24B1B0N6 92 aa16.82■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Cmc4Q61908 68 aa16.81■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Q9DAQ5 155 aa16.81■□□□□ 0.28
Ubp1-203ENSMUST00000116492 1700011M02RikB1AX35 88 aa16.81■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Zfand2aQ9JII7 171 aa16.8■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Gm3250E9Q1M3 230 aa16.79■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Prp2P05143 317 aa16.79■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Phpt1Q9DAK9 124 aa16.79■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Ly6hQ9WUC3 139 aa16.79■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Psors1c2Q80ZC9 134 aa16.79■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Q8R092 253 aa16.79■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Tomm7Q9D173 55 aa16.79■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Igkv4-61A0A0G2JH00 117 aa16.78■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Lst1O08843 95 aa16.78■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Lage3Q9CR70 148 aa16.78■□□□□ 0.28
Ubp1-203ENSMUST00000116492 CrygfQ9CXV3 174 aa16.78■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Igkv4-54A0A0G2JES9 117 aa16.77■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Klk9Q32M27 251 aa16.77■□□□□ 0.28
Ubp1-203ENSMUST00000116492 CdsnQ7TPC1 561 aa16.77■□□□□ 0.28
Ubp1-203ENSMUST00000116492 Zfp951A0A087WRH0 451 aa16.76■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Trav9d-4A0A0G2JG37 103 aa16.76■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Odf3l2Q3TZ65 277 aa16.76■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Igkv4-53A0A0G2JFC6 119 aa16.75■□□□□ 0.27
Ubp1-203ENSMUST00000116492 CrygdP04342 174 aa16.75■□□□□ 0.27
Ubp1-203ENSMUST00000116492 CrygeQ03740 174 aa16.75■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Tm2d2Q8R0I4 213 aa16.75■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Ighv1-59A0A0A6YXE0 117 aa16.75■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Defb50Q6TU36 73 aa16.75■□□□□ 0.27
Ubp1-203ENSMUST00000116492 MalO09198 153 aa16.74■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Ube2wQ8VDW4 151 aa16.74■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Gm4861Q8C5A4 106 aa16.73■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Atp5g3P56384 141 aa16.73■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Gm10549Q3URY4 149 aa16.73■□□□□ 0.27
Ubp1-203ENSMUST00000116492 Cryba4Q9JJV0 196 aa16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 76.9 ms