RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 NischQ80TM9 1593 aa47,27■■■■■ 5,16
Ubp1-203ENSMUST00000116492 Gm35339A0A140LHH9 1649 aa46,69■■■■■ 5,06
Ubp1-203ENSMUST00000116492 Abcc9P70170 1546 aa45,97■■■■■ 4,95
Ubp1-203ENSMUST00000116492 Abcc8B2RUS7 1588 aa44,96■■■■■ 4,79
Ubp1-203ENSMUST00000116492 Rhox8Q6VSS7 320 aa43,42■■■■■ 4,54
Ubp1-203ENSMUST00000116492 Rtl1Q7M732 1744 aa43,1■■■■■ 4,49
Ubp1-203ENSMUST00000116492 Ccdc180J3QNE4 1664 aa42,19■■■■■ 4,34
Ubp1-203ENSMUST00000116492 Dcaf1Q80TR8 1506 aa42,09■■■■■ 4,33
Ubp1-203ENSMUST00000116492 ScribQ80U72 1612 aa41,92■■■■■ 4,3
Ubp1-203ENSMUST00000116492 Zcchc6Q5BLK4 1491 aaKnown RBP41,45■■■■■ 4,23
Ubp1-203ENSMUST00000116492 Rb1cc1Q9ESK9 1588 aa41,4■■■■■ 4,22
Ubp1-203ENSMUST00000116492 Kdm5dQ62240 1548 aa41,14■■■■■ 4,18
Ubp1-203ENSMUST00000116492 Baz1aO88379 1555 aa40,98■■■■■ 4,15
Ubp1-203ENSMUST00000116492 NacadQ5SWP3 1504 aa40,9■■■■■ 4,14
Ubp1-203ENSMUST00000116492 Crybg2B7ZCC2 1516 aa40,39■■■■■ 4,06
Ubp1-203ENSMUST00000116492 Ccdc136Q3TVA9 1136 aa40,25■■■■■ 4,03
Ubp1-203ENSMUST00000116492 HrcG5E8J6 738 aa40,21■■■■■ 4,03
Ubp1-203ENSMUST00000116492 Smarca2Q6DIC0 1577 aa40,04■■■■■ 4
Ubp1-203ENSMUST00000116492 Sycp2Q9CUU3 1500 aa39,99■■■■□ 3,99
Ubp1-203ENSMUST00000116492 Trim41Q5NCC3 630 aa39,65■■■■□ 3,94
Ubp1-203ENSMUST00000116492 Rpgrip1Q9EPQ2 1331 aa39,47■■■■□ 3,91
Ubp1-203ENSMUST00000116492 Brd4Q9ESU6 1400 aaKnown RBP39,08■■■■□ 3,85
Ubp1-203ENSMUST00000116492 BicraF8VPZ9 1578 aa39,06■■■■□ 3,84
Ubp1-203ENSMUST00000116492 Cep164Q5DU05 1446 aa39,05■■■■□ 3,84
Ubp1-203ENSMUST00000116492 Cecr2E9Q2Z1 1453 aa38,97■■■■□ 3,83
Ubp1-203ENSMUST00000116492 Acin1Q9JIX8 1338 aaKnown RBP38,89■■■■□ 3,82
Ubp1-203ENSMUST00000116492 Synj1Q8CHC4 1574 aa38,68■■■■□ 3,78
Ubp1-203ENSMUST00000116492 Golga3P55937 1487 aa38,6■■■■□ 3,77
Ubp1-203ENSMUST00000116492 Ehmt2Q9Z148 1263 aaKnown RBP38,56■■■■□ 3,76
Ubp1-203ENSMUST00000116492 Cngb1E1AZ71 1325 aa38,54■■■■□ 3,76
Ubp1-203ENSMUST00000116492 Rsf1E9PWW9 1441 aaKnown RBP38,51■■■■□ 3,76
Ubp1-203ENSMUST00000116492 CftrP26361 1476 aa38,5■■■■□ 3,75
Ubp1-203ENSMUST00000116492 Chic1Q8CBW7 227 aa38,36■■■■□ 3,73
Ubp1-203ENSMUST00000116492 Cttnbp2B9EJA2 1648 aa38,35■■■■□ 3,73
Ubp1-203ENSMUST00000116492 Ccdc88bQ4QRL3 1481 aa38,27■■■■□ 3,72
Ubp1-203ENSMUST00000116492 Smarca4Q3TKT4 1613 aaKnown RBP38,25■■■■□ 3,71
Ubp1-203ENSMUST00000116492 Top2bQ64511 1612 aa38,21■■■■□ 3,71
Ubp1-203ENSMUST00000116492 Esf1Q3V1V3 845 aaKnown RBP38,11■■■■□ 3,69
Ubp1-203ENSMUST00000116492 Gab3Q8BSM5 595 aa37,92■■■■□ 3,66
Ubp1-203ENSMUST00000116492 Cc2d2aQ8CFW7 1633 aa37,74■■■■□ 3,63
Ubp1-203ENSMUST00000116492 Iqgap2Q3UQ44 1575 aa37,71■■■■□ 3,63
Ubp1-203ENSMUST00000116492 Fmn1Q05860 1466 aa37,64■■■■□ 3,62
Ubp1-203ENSMUST00000116492 Atad2bE9Q166 1460 aaKnown RBP37,58■■■■□ 3,61
Ubp1-203ENSMUST00000116492 Top2aQ01320 1528 aaKnown RBP37,44■■■■□ 3,58
Ubp1-203ENSMUST00000116492 Pds5bQ4VA53 1446 aaKnown RBP37,42■■■■□ 3,58
Ubp1-203ENSMUST00000116492 Rapgef2Q8CHG7 1496 aa37,37■■■■□ 3,57
Ubp1-203ENSMUST00000116492 TnnQ80Z71 1560 aa37,08■■■■□ 3,53
Ubp1-203ENSMUST00000116492 Cep162Q6ZQ06 1403 aa37,03■■■■□ 3,52
Ubp1-203ENSMUST00000116492 Pcgf6Q99NA9 353 aa36,99■■■■□ 3,51
Ubp1-203ENSMUST00000116492 Wdr62Q3U3T8 1523 aa36,99■■■■□ 3,51
Ubp1-203ENSMUST00000116492 Frmpd1A2AKB4 1549 aa36,97■■■■□ 3,51
Ubp1-203ENSMUST00000116492 NefmP08553 848 aa36,89■■■■□ 3,5
Ubp1-203ENSMUST00000116492 Mier1Q5UAK0 511 aa36,88■■■■□ 3,49
Ubp1-203ENSMUST00000116492 Eif4g1Q6NZJ6 1600 aaKnown RBP36,81■■■■□ 3,48
Ubp1-203ENSMUST00000116492 Lamc3Q9R0B6 1581 aa36,77■■■■□ 3,48
Ubp1-203ENSMUST00000116492 Ercc6F8VPZ5 1481 aa36,72■■■■□ 3,47
Ubp1-203ENSMUST00000116492 Npm2Q80W85 207 aa36,7■■■■□ 3,47
Ubp1-203ENSMUST00000116492 Myt1lP97500 1187 aa36,63■■■■□ 3,45
Ubp1-203ENSMUST00000116492 Unc13aQ4KUS2 1712 aa36,56■■■■□ 3,44
Ubp1-203ENSMUST00000116492 Kif15Q6P9L6 1387 aa36,5■■■■□ 3,43
Ubp1-203ENSMUST00000116492 NrkQ9R0G8 1455 aa36,5■■■■□ 3,43
Ubp1-203ENSMUST00000116492 Supt5hO55201 1082 aaKnown RBP36,49■■■■□ 3,43
Ubp1-203ENSMUST00000116492 UbtfP25976 765 aaKnown RBP36,46■■■■□ 3,43
Ubp1-203ENSMUST00000116492 Arhgap35Q91YM2 1499 aa36,45■■■■□ 3,42
Ubp1-203ENSMUST00000116492 Camsap1A2AHC3 1581 aa36,41■■■■□ 3,42
Ubp1-203ENSMUST00000116492 Clip1Q922J3 1391 aa36,41■■■■□ 3,42
Ubp1-203ENSMUST00000116492 PtprkP35822 1457 aa36,39■■■■□ 3,42
Ubp1-203ENSMUST00000116492 Shroom4Q1W617 1475 aa36,34■■■■□ 3,41
Ubp1-203ENSMUST00000116492 Zeb1Q64318 1117 aa36,27■■■■□ 3,4
Ubp1-203ENSMUST00000116492 Ccdc18Q640L5 1455 aa36,25■■■■□ 3,39
Ubp1-203ENSMUST00000116492 Map3k1P53349 1493 aa36,24■■■■□ 3,39
Ubp1-203ENSMUST00000116492 Il27Q8K3I6 234 aa36,2■■■■□ 3,39
Ubp1-203ENSMUST00000116492 Phldb1Q6PDH0 1371 aaKnown RBP36,17■■■■□ 3,38
Ubp1-203ENSMUST00000116492 Grin2bQ01097 1482 aa36,17■■■■□ 3,38
Ubp1-203ENSMUST00000116492 Thoc2B1AZI6 1594 aaKnown RBP36,16■■■■□ 3,38
Ubp1-203ENSMUST00000116492 Eea1Q8BL66 1411 aa36,14■■■■□ 3,38
Ubp1-203ENSMUST00000116492 Plekhg3Q4VAC9 1341 aa36,04■■■■□ 3,36
Ubp1-203ENSMUST00000116492 Arap1Q4LDD4 1452 aa36,03■■■■□ 3,36
Ubp1-203ENSMUST00000116492 Mroh2bQ7M6Y6 1581 aa35,99■■■■□ 3,35
Ubp1-203ENSMUST00000116492 Ncapd3Q6ZQK0 1506 aa35,96■■■■□ 3,35
Ubp1-203ENSMUST00000116492 Arhgef5E9Q7D5 1581 aa35,96■■■■□ 3,35
Ubp1-203ENSMUST00000116492 Setd5Q5XJV7 1441 aa35,93■■■■□ 3,34
Ubp1-203ENSMUST00000116492 Cux2P70298 1426 aa35,91■■■■□ 3,34
Ubp1-203ENSMUST00000116492 AqrQ8CFQ3 1481 aaKnown RBP35,87■■■■□ 3,33
Ubp1-203ENSMUST00000116492 Las1lA2BE28 776 aaKnown RBP35,85■■■■□ 3,33
Ubp1-203ENSMUST00000116492 Fam135aQ6NS59 1506 aa35,84■■■■□ 3,33
Ubp1-203ENSMUST00000116492 Baz1bQ9Z277 1479 aa35,83■■■■□ 3,33
Ubp1-203ENSMUST00000116492 Ubl4bQ9CQ84 188 aa35,82■■■■□ 3,32
Ubp1-203ENSMUST00000116492 Erich3F6QRE9 1637 aa35,8■■■■□ 3,32
Ubp1-203ENSMUST00000116492 Efcab5A0JP43 1406 aa35,79■■■■□ 3,32
Ubp1-203ENSMUST00000116492 Sall2Q9QX96 1004 aa35,76■■■■□ 3,32
Ubp1-203ENSMUST00000116492 Npm1Q61937 292 aaKnown RBP35,75■■■■□ 3,31
Ubp1-203ENSMUST00000116492 Tiam1Q60610 1591 aa35,73■■■■□ 3,31
Ubp1-203ENSMUST00000116492 Ankrd26Q811D2 1581 aa35,72■■■■□ 3,31
Ubp1-203ENSMUST00000116492 LrpprcQ6PB66 1392 aaKnown RBP35,7■■■■□ 3,31
Ubp1-203ENSMUST00000116492 PogzQ8BZH4 1409 aaKnown RBP35,66■■■■□ 3,3
Ubp1-203ENSMUST00000116492 Ap3b1Q9Z1T1 1105 aa35,64■■■■□ 3,3
Ubp1-203ENSMUST00000116492 Carmil1Q6EDY6 1374 aa35,61■■■■□ 3,29
Ubp1-203ENSMUST00000116492 Duox2A2AQ99 1517 aa35,59■■■■□ 3,29
Ubp1-203ENSMUST00000116492 Naip1Q9QWK5 1403 aa35,58■■■■□ 3,29
Retrieved 100 of 22,080 RNA–protein pairs in 10,4 ms