Protein–RNA interactions for Protein: Q80ZQ7

BC048562, cDNA sequence BC048562, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC048562Q80ZQ7 Gm25239-201ENSMUST00000174915 86 ntBASIC28.77■■■□□ 2.2
BC048562Q80ZQ7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
BC048562Q80ZQ7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
BC048562Q80ZQ7 Gm24109-201ENSMUST00000175489 103 ntBASIC25.11■■□□□ 1.61
BC048562Q80ZQ7 Gm15042-201ENSMUST00000120212 883 ntBASIC24.83■■□□□ 1.57
BC048562Q80ZQ7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
BC048562Q80ZQ7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
BC048562Q80ZQ7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
BC048562Q80ZQ7 Gm15045-201ENSMUST00000117359 883 ntBASIC24.12■■□□□ 1.45
BC048562Q80ZQ7 Gm23366-201ENSMUST00000175022 89 ntBASIC24.08■■□□□ 1.45
BC048562Q80ZQ7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
BC048562Q80ZQ7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
BC048562Q80ZQ7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.52■■□□□ 1.36
BC048562Q80ZQ7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
BC048562Q80ZQ7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BC048562Q80ZQ7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BC048562Q80ZQ7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BC048562Q80ZQ7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BC048562Q80ZQ7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.21■■□□□ 1.31
BC048562Q80ZQ7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
BC048562Q80ZQ7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23■■□□□ 1.27
BC048562Q80ZQ7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
BC048562Q80ZQ7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
BC048562Q80ZQ7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
BC048562Q80ZQ7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
BC048562Q80ZQ7 Gm25238-201ENSMUST00000174914 89 ntBASIC22.78■■□□□ 1.24
BC048562Q80ZQ7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
BC048562Q80ZQ7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
BC048562Q80ZQ7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
BC048562Q80ZQ7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
BC048562Q80ZQ7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
BC048562Q80ZQ7 Psd-208ENSMUST00000224556 2034 ntBASIC22.2■■□□□ 1.14
BC048562Q80ZQ7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.18■■□□□ 1.14
BC048562Q80ZQ7 Gm25262-201ENSMUST00000174934 133 ntBASIC22.16■■□□□ 1.14
BC048562Q80ZQ7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
BC048562Q80ZQ7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
BC048562Q80ZQ7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.09■■□□□ 1.13
BC048562Q80ZQ7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22■■□□□ 1.11
BC048562Q80ZQ7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BC048562Q80ZQ7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.92■■□□□ 1.1
BC048562Q80ZQ7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.9■■□□□ 1.1
BC048562Q80ZQ7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
BC048562Q80ZQ7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BC048562Q80ZQ7 Gm26115-201ENSMUST00000175605 87 ntBASIC21.77■■□□□ 1.08
BC048562Q80ZQ7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.77■■□□□ 1.08
BC048562Q80ZQ7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
BC048562Q80ZQ7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
BC048562Q80ZQ7 Gm27325-201ENSMUST00000175467 74 ntBASIC21.69■■□□□ 1.06
BC048562Q80ZQ7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.69■■□□□ 1.06
BC048562Q80ZQ7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BC048562Q80ZQ7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BC048562Q80ZQ7 Rab21-202ENSMUST00000218831 843 ntBASIC21.58■■□□□ 1.05
BC048562Q80ZQ7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.58■■□□□ 1.05
BC048562Q80ZQ7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
BC048562Q80ZQ7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BC048562Q80ZQ7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
BC048562Q80ZQ7 Gm8109-201ENSMUST00000194076 746 ntBASIC21.48■■□□□ 1.03
BC048562Q80ZQ7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BC048562Q80ZQ7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
BC048562Q80ZQ7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BC048562Q80ZQ7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.32■■□□□ 1
BC048562Q80ZQ7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BC048562Q80ZQ7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.29■■□□□ 1
BC048562Q80ZQ7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC048562Q80ZQ7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
BC048562Q80ZQ7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.21■□□□□ 0.99
BC048562Q80ZQ7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BC048562Q80ZQ7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BC048562Q80ZQ7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
BC048562Q80ZQ7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.16■□□□□ 0.98
BC048562Q80ZQ7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
BC048562Q80ZQ7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.13■□□□□ 0.97
BC048562Q80ZQ7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
BC048562Q80ZQ7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.08■□□□□ 0.97
BC048562Q80ZQ7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BC048562Q80ZQ7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
BC048562Q80ZQ7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BC048562Q80ZQ7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BC048562Q80ZQ7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.97■□□□□ 0.95
BC048562Q80ZQ7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BC048562Q80ZQ7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BC048562Q80ZQ7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BC048562Q80ZQ7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.9■□□□□ 0.94
BC048562Q80ZQ7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BC048562Q80ZQ7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BC048562Q80ZQ7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BC048562Q80ZQ7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BC048562Q80ZQ7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BC048562Q80ZQ7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.84■□□□□ 0.93
BC048562Q80ZQ7 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.82■□□□□ 0.92
BC048562Q80ZQ7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BC048562Q80ZQ7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BC048562Q80ZQ7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BC048562Q80ZQ7 Gm24804-201ENSMUST00000174982 85 ntBASIC20.76■□□□□ 0.91
BC048562Q80ZQ7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BC048562Q80ZQ7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.71■□□□□ 0.91
BC048562Q80ZQ7 Gm27322-201ENSMUST00000184007 104 ntBASIC20.71■□□□□ 0.91
BC048562Q80ZQ7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BC048562Q80ZQ7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BC048562Q80ZQ7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms