RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Rpl13aP19253 203 aaKnown RBP8.99□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Usp9yF8VPU6 2556 aa8.99□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Gm10772F7AIG4 85 aa8.99□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Glrp1E9Q9S8 174 aa8.98□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Defb47Q30KN1 79 aa8.98□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Trav3-1Q5R1I8 114 aa8.98□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Ndufa3Q9CQ91 84 aa8.98□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Crlf1Q9JM58 425 aa8.98□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Krtap24-1G3X9A2 248 aa8.98□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Ighv1-61P01749 117 aa8.98□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Ighv1-62-1A0A075B5U3 116 aa8.97□□□□□ -0.97
Rnf4-201ENSMUST00000030992 P01745 121 aa8.97□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Dppa2Q9CWH0 301 aa8.97□□□□□ -0.97
Rnf4-201ENSMUST00000030992 TrrapQ80YV3 2565 aaKnown RBP8.97□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Trav9d-3A0A075B695 113 aa8.97□□□□□ -0.97
Rnf4-201ENSMUST00000030992 4930546C10RikE9Q4Y3 121 aa8.97□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Spink1P09036 80 aa8.97□□□□□ -0.97
Rnf4-201ENSMUST00000030992 BC048562Q80ZQ7 204 aa8.97□□□□□ -0.97
Rnf4-201ENSMUST00000030992 1700010B08RikQ9DAI7 102 aa8.97□□□□□ -0.97
Rnf4-201ENSMUST00000030992 4930415O20RikQ8CDT5 131 aa8.96□□□□□ -0.97
Rnf4-201ENSMUST00000030992 Cdip1Q9DB75 208 aa8.96□□□□□ -0.97
Rnf4-201ENSMUST00000030992 GfyJ3KML8 504 aa8.96□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Insl3O09107 122 aa8.95□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Epg5Q80TA9 2572 aa8.95□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Igkv4-72A0A0B4J1I4 117 aa8.95□□□□□ -0.98
Rnf4-201ENSMUST00000030992 NipblQ6KCD5 2798 aaKnown RBP8.95□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Lgals4Q8K419 326 aa8.94□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Cep192E9Q4Y4 2514 aaKnown RBP8.94□□□□□ -0.98
Rnf4-201ENSMUST00000030992 MtorQ9JLN9 2549 aa8.94□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Gm28269A0A087WSG3 125 aa8.94□□□□□ -0.98
Rnf4-201ENSMUST00000030992 CenpwQ3URR0 86 aa8.94□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Eif4ebp3Q80VV3 101 aa8.94□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Hivep2Q3UHF7 2430 aa8.94□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Gm43218A0A0G2JGT0 114 aa8.94□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Nhlrc1Q8BR37 401 aa8.94□□□□□ -0.98
Rnf4-201ENSMUST00000030992 9430069I07RikQ9CX21 111 aa8.94□□□□□ -0.98
Rnf4-201ENSMUST00000030992 CirbpP60824 172 aaKnown RBP8.93□□□□□ -0.98
Rnf4-201ENSMUST00000030992 SbsponQ3UPR9 264 aa8.93□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Akap13E9Q394 2776 aa8.93□□□□□ -0.98
Rnf4-201ENSMUST00000030992 BatfO35284 125 aa8.93□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Sostdc1Q9CQN4 206 aa8.93□□□□□ -0.98
Rnf4-201ENSMUST00000030992 MobpQ9D2P8 170 aa8.93□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Trav13n-1A0A0G2JEU8 110 aa8.92□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Cox7a1P56392 80 aa8.92□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Ppp1r32Q148A4 427 aa8.92□□□□□ -0.98
Rnf4-201ENSMUST00000030992 RetnQ99P87 114 aa8.91□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Pla2g1bQ9Z0Y2 146 aa8.91□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Ighv1-49A0A0A6YWX2 117 aa8.91□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Spink4O35679 86 aa8.91□□□□□ -0.98
Rnf4-201ENSMUST00000030992 Wnk1P83741 2377 aa8.9□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Sh2d1aO88890 126 aa8.9□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Q9DAQ5 155 aa8.9□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Gm10577Q3UDV9 132 aa8.89□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Zfp462B1AWL2 2495 aaKnown RBP8.89□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Gm29423A0A087WRM1 55 aa8.89□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Gm3250E9Q1M3 230 aa8.89□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Gm11444F6QMA6 170 aa8.89□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Gm11020F6ZGD5 61 aa8.89□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Gm7257D3YX25 99 aa8.88□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Cox6b1P56391 86 aaKnown RBP8.88□□□□□ -0.99
Rnf4-201ENSMUST00000030992 1700011M02RikB1AX35 88 aa8.88□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Trav13-4-dv7A0A075B6C2 110 aa8.87□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Defb50Q6TU36 73 aa8.87□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Zfand2aQ9JII7 171 aa8.87□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Ly6hQ9WUC3 139 aa8.87□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Trav11A0A0B4J1J9 114 aa8.87□□□□□ -0.99
Rnf4-201ENSMUST00000030992 2310009B15RikA0A0A6YWI4 143 aa8.87□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Cops9Q3U898 57 aa8.87□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Zfp951A0A087WRH0 451 aa8.86□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Igkv4-61A0A0G2JH00 117 aa8.86□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Prp2P05143 317 aa8.86□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Gm4861Q8C5A4 106 aa8.86□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Smrp1Q2MH31 260 aa8.86□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Igkv4-53A0A0G2JFC6 119 aa8.85□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Atp5g3P56384 141 aa8.85□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Cryba4Q9JJV0 196 aa8.85□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Igkv4-54A0A0G2JES9 117 aa8.85□□□□□ -0.99
Rnf4-201ENSMUST00000030992 C2cd3Q52KB6 2323 aa8.85□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Psors1c2Q80ZC9 134 aa8.84□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Cox6cQ9CPQ1 76 aa8.84□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Lst1O08843 95 aa8.84□□□□□ -0.99
Rnf4-201ENSMUST00000030992 Odf3l2Q3TZ65 277 aa8.84□□□□□ -0.99
Rnf4-201ENSMUST00000030992 CdsnQ7TPC1 561 aa8.83□□□□□ -1
Rnf4-201ENSMUST00000030992 Gm3233E9Q2H5 230 aa8.83□□□□□ -1
Rnf4-201ENSMUST00000030992 Ss18l2Q9D174 77 aa8.83□□□□□ -1
Rnf4-201ENSMUST00000030992 Trav7-6A0A075B640 112 aa8.83□□□□□ -1
Rnf4-201ENSMUST00000030992 Trav9d-4A0A0G2JG37 103 aa8.83□□□□□ -1
Rnf4-201ENSMUST00000030992 Gm10549Q3URY4 149 aa8.83□□□□□ -1
Rnf4-201ENSMUST00000030992 Tenm4Q3UHK6 2771 aa8.82□□□□□ -1
Rnf4-201ENSMUST00000030992 Fbn1Q61554 2873 aaKnown RBP8.82□□□□□ -1
Rnf4-201ENSMUST00000030992 Sprr1bQ62267 153 aa8.82□□□□□ -1
Rnf4-201ENSMUST00000030992 CrygfQ9CXV3 174 aa8.82□□□□□ -1
Rnf4-201ENSMUST00000030992 Phpt1Q9DAK9 124 aa8.82□□□□□ -1
Rnf4-201ENSMUST00000030992 Klk9Q32M27 251 aa8.82□□□□□ -1
Rnf4-201ENSMUST00000030992 Tm2d2Q8R0I4 213 aa8.82□□□□□ -1
Rnf4-201ENSMUST00000030992 Ube2wQ8VDW4 151 aa8.82□□□□□ -1
Rnf4-201ENSMUST00000030992 Lage3Q9CR70 148 aa8.82□□□□□ -1
Rnf4-201ENSMUST00000030992 Atp5g1Q9CR84 136 aa8.82□□□□□ -1
Rnf4-201ENSMUST00000030992 Tomm7Q9D173 55 aa8.82□□□□□ -1
Rnf4-201ENSMUST00000030992 Ighv1-59A0A0A6YXE0 117 aa8.81□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 126.7 ms